RNA–Protein interactions for RNA: YDR066C

RTR2, Transcript of Protein of unknown function, yeast

Gene RTR2, Length 591 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTR2	YDR066C	RPS1A	P33442	255 aa	Known RBP	0.55	□□□□□ -2.32
RTR2	YDR066C	SFT2	P38166	215 aa		0.55	□□□□□ -2.32
RTR2	YDR066C	LST8	P41318	303 aa		0.55	□□□□□ -2.32
RTR2	YDR066C	RBL2	P48606	106 aa	Known RBP	0.55	□□□□□ -2.32
RTR2	YDR066C	YGL149W	P53116	101 aa		0.55	□□□□□ -2.32
RTR2	YDR066C	COA4	Q05809	96 aa		0.55	□□□□□ -2.32
RTR2	YDR066C	RAF1	Q06891	181 aa		0.55	□□□□□ -2.32
RTR2	YDR066C	YOR385W	Q08909	290 aa		0.55	□□□□□ -2.32
RTR2	YDR066C	YOR1	P53049	1477 aa		0.54	□□□□□ -2.32
RTR2	YDR066C	LAA1	P39526	2014 aa		0.54	□□□□□ -2.32
RTR2	YDR066C	YHR213W	P0CI67	198 aa		0.54	□□□□□ -2.32
RTR2	YDR066C	SPG1	P50088	95 aa		0.54	□□□□□ -2.32
RTR2	YDR066C	COF1	Q03048	143 aa	Known RBP	0.54	□□□□□ -2.32
RTR2	YDR066C	COA6	Q3E846	104 aa		0.54	□□□□□ -2.32
RTR2	YDR066C	DDP1	Q99321	188 aa	Known RBP	0.54	□□□□□ -2.32
RTR2	YDR066C	ANB1	P19211	157 aa		0.53	□□□□□ -2.32
RTR2	YDR066C	AIM4	P38305	123 aa	Predicted RBP	0.53	□□□□□ -2.32
RTR2	YDR066C	EMC4	P53073	190 aa		0.53	□□□□□ -2.32
RTR2	YDR066C	YGR039W	P53225	103 aa		0.53	□□□□□ -2.32
RTR2	YDR066C	HUG1	Q6Q5K6	68 aa		0.53	□□□□□ -2.32
RTR2	YDR066C	URA2	P07259	2214 aa	Known RBP	0.52	□□□□□ -2.33
RTR2	YDR066C	MRPL44	P19956	98 aa		0.52	□□□□□ -2.33
RTR2	YDR066C	YBR013C	P38215	129 aa		0.52	□□□□□ -2.33
RTR2	YDR066C	YMR321C	Q04898	105 aa		0.52	□□□□□ -2.33
RTR2	YDR066C	YLR307C-A	Q3E825	87 aa		0.52	□□□□□ -2.33
RTR2	YDR066C	MIC27	P50945	234 aa		0.51	□□□□□ -2.33
RTR2	YDR066C	HHO1	P53551	258 aa		0.51	□□□□□ -2.33
RTR2	YDR066C	YLR296W	Q05898	108 aa		0.51	□□□□□ -2.33
RTR2	YDR066C	MED11	Q99278	115 aa		0.51	□□□□□ -2.33
RTR2	YDR066C	YLR157W-E	P0CF00	54 aa		0.5	□□□□□ -2.33
RTR2	YDR066C	HAP3	P13434	144 aa		0.5	□□□□□ -2.33
RTR2	YDR066C	YCR050C	P25630	102 aa		0.5	□□□□□ -2.33
RTR2	YDR066C	RPL14A	P36105	138 aa	Known RBP	0.5	□□□□□ -2.33
RTR2	YDR066C	MRPL11	P36521	249 aa	Predicted RBP	0.5	□□□□□ -2.33
RTR2	YDR066C	QCR10	P37299	77 aa		0.5	□□□□□ -2.33
RTR2	YDR066C	RPL14B	P38754	138 aa	Known RBP	0.5	□□□□□ -2.33
RTR2	YDR066C	BRP1	P53194	125 aa		0.5	□□□□□ -2.33
RTR2	YDR066C	FIT3	Q08907	204 aa		0.5	□□□□□ -2.33
RTR2	YDR066C	SPC3	Q12133	184 aa		0.5	□□□□□ -2.33
RTR2	YDR066C	GTT2	Q12390	233 aa		0.5	□□□□□ -2.33
RTR2	YDR066C	GSC2	P40989	1895 aa		0.5	□□□□□ -2.33
RTR2	YDR066C	PFY1	P07274	126 aa		0.49	□□□□□ -2.33
RTR2	YDR066C	HSP10	P38910	106 aa		0.49	□□□□□ -2.33
RTR2	YDR066C	YAL064W	P39711	94 aa		0.49	□□□□□ -2.33
RTR2	YDR066C	HPM1	P40481	377 aa		0.49	□□□□□ -2.33
RTR2	YDR066C	LDB18	Q07887	179 aa		0.49	□□□□□ -2.33
RTR2	YDR066C	YOR034C-A	Q3E735	80 aa		0.49	□□□□□ -2.33
RTR2	YDR066C	SNT2	P53127	1403 aa		0.48	□□□□□ -2.33
RTR2	YDR066C	ELC1	Q03071	99 aa		0.48	□□□□□ -2.33
RTR2	YDR066C	RTC6	O14464	93 aa		0.47	□□□□□ -2.33
RTR2	YDR066C	YSF3	P0C074	85 aa	Predicted RBP	0.47	□□□□□ -2.33
RTR2	YDR066C	PRS3	P38689	320 aa	Known RBP	0.47	□□□□□ -2.33
RTR2	YDR066C	YAP3	P38749	330 aa		0.47	□□□□□ -2.33
RTR2	YDR066C	AIM18	P38884	321 aa		0.47	□□□□□ -2.33
RTR2	YDR066C	CSN9	Q03981	162 aa		0.47	□□□□□ -2.33
RTR2	YDR066C	SDH7	Q04401	133 aa		0.47	□□□□□ -2.33
RTR2	YDR066C	FCF2	Q12035	217 aa	Predicted RBP	0.47	□□□□□ -2.33
RTR2	YDR066C	ATP14	Q12349	124 aa		0.47	□□□□□ -2.33
RTR2	YDR066C	PAU21	P0CE86	164 aa		0.46	□□□□□ -2.34
RTR2	YDR066C	PAU22	P0CE87	164 aa		0.46	□□□□□ -2.34
RTR2	YDR066C	TVP18	Q04767	167 aa		0.46	□□□□□ -2.34
RTR2	YDR066C	GSP1	P32835	219 aa	Known RBP	0.45	□□□□□ -2.34
RTR2	YDR066C	TRS20	P38334	175 aa		0.45	□□□□□ -2.34
RTR2	YDR066C	GIM4	P40005	111 aa	Known RBP	0.45	□□□□□ -2.34
RTR2	YDR066C	POR2	P40478	281 aa		0.45	□□□□□ -2.34
RTR2	YDR066C	BLM10	P43583	2143 aa		0.45	□□□□□ -2.34
RTR2	YDR066C	YGR017W	P53210	297 aa		0.45	□□□□□ -2.34
RTR2	YDR066C	TY4B-J	P47024	1803 aa		0.45	□□□□□ -2.34
RTR2	YDR066C	MRPL31	P14063	131 aa	Predicted RBP	0.44	□□□□□ -2.34
RTR2	YDR066C	HYM1	P32464	399 aa		0.44	□□□□□ -2.34
RTR2	YDR066C	SRX1	P36077	127 aa		0.44	□□□□□ -2.34
RTR2	YDR066C	RPL36B	O14455	100 aa	Known RBP	0.43	□□□□□ -2.34
RTR2	YDR066C	RPL36A	P05745	100 aa	Predicted RBP	0.43	□□□□□ -2.34
RTR2	YDR066C	SUA7	P29055	345 aa	Predicted RBP	0.43	□□□□□ -2.34
RTR2	YDR066C	YIL163C	P40448	117 aa		0.43	□□□□□ -2.34
RTR2	YDR066C	PHS1	P40857	217 aa		0.43	□□□□□ -2.34
RTR2	YDR066C	HPA2	Q06592	156 aa		0.43	□□□□□ -2.34
RTR2	YDR066C	ENV10	Q99382	181 aa		0.42	□□□□□ -2.34
RTR2	YDR066C	EMP24	P32803	203 aa	Known RBP	0.41	□□□□□ -2.34
RTR2	YDR066C	MPC1	P53157	130 aa	Known RBP	0.41	□□□□□ -2.34
RTR2	YDR066C	ERV14	P53173	138 aa		0.41	□□□□□ -2.34
RTR2	YDR066C	YLR194C	Q05777	254 aa		0.41	□□□□□ -2.34
RTR2	YDR066C	YNL277W-A	Q3E7Z0	62 aa		0.41	□□□□□ -2.34
RTR2	YDR066C	YRF1-3	P0CX14	1859 aa		0.4	□□□□□ -2.35
RTR2	YDR066C	YRF1-7	P0CX15	1859 aa		0.4	□□□□□ -2.35
RTR2	YDR066C	YJR128W	P47162	119 aa		0.4	□□□□□ -2.35
RTR2	YDR066C	ARL3	Q02804	198 aa		0.4	□□□□□ -2.35
RTR2	YDR066C	SEC59	P20048	519 aa		0.39	□□□□□ -2.35
RTR2	YDR066C	CYC2	P38909	366 aa		0.39	□□□□□ -2.35
RTR2	YDR066C	BNI1	P41832	1953 aa		0.38	□□□□□ -2.35
RTR2	YDR066C	RPS20	P38701	121 aa	Known RBP	0.38	□□□□□ -2.35
RTR2	YDR066C	YFR035C	P43608	114 aa		0.38	□□□□□ -2.35
RTR2	YDR066C	CNL1	Q06333	122 aa		0.38	□□□□□ -2.35
RTR2	YDR066C	Q0144	Q9ZZW2	109 aa		0.38	□□□□□ -2.35
RTR2	YDR066C	TAO3	P40468	2376 aa		0.38	□□□□□ -2.35
RTR2	YDR066C	SEC16	P48415	2195 aa	Known RBP	0.38	□□□□□ -2.35
RTR2	YDR066C	RPL22A	P05749	121 aa	Known RBP	0.37	□□□□□ -2.35
RTR2	YDR066C	YKL044W	P36092	106 aa		0.37	□□□□□ -2.35
RTR2	YDR066C	SFT1	P43682	97 aa		0.37	□□□□□ -2.35
RTR2	YDR066C	TIM8	P57744	87 aa		0.37	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 128.1 ms