RNA–Protein interactions for RNA: YDR062W

LCB2, Transcript of Component of serine palmitoyltransferase, yeast

Gene LCB2, Length 1,686 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCB2	YDR062W	BOL1	Q3E793	110 aa		3.55	□□□□□ -1.84
LCB2	YDR062W	UGX2	P32772	223 aa		3.55	□□□□□ -1.84
LCB2	YDR062W	ERV15	P38312	142 aa		3.55	□□□□□ -1.84
LCB2	YDR062W	YNL217W	P40152	326 aa		3.55	□□□□□ -1.84
LCB2	YDR062W	APS2	Q00381	147 aa		3.55	□□□□□ -1.84
LCB2	YDR062W	ANT1	Q06497	328 aa		3.55	□□□□□ -1.84
LCB2	YDR062W	ACC1	Q00955	2233 aa	Known RBP	3.54	□□□□□ -1.84
LCB2	YDR062W	YLR236C	A0A023PZG4	107 aa		3.54	□□□□□ -1.84
LCB2	YDR062W	YOR304C-A	O14468	76 aa		3.54	□□□□□ -1.84
LCB2	YDR062W	RPL14A	P36105	138 aa	Known RBP	3.54	□□□□□ -1.84
LCB2	YDR062W	RPL14B	P38754	138 aa	Known RBP	3.54	□□□□□ -1.84
LCB2	YDR062W	RDS3	Q06835	107 aa	Predicted RBP	3.54	□□□□□ -1.84
LCB2	YDR062W	YIR021W-A	Q3E739	70 aa		3.54	□□□□□ -1.84
LCB2	YDR062W	YLR099W-A	Q3E798	87 aa		3.54	□□□□□ -1.84
LCB2	YDR062W	YOR381W-A	Q3E804	55 aa		3.54	□□□□□ -1.84
LCB2	YDR062W	DDR48	P18899	430 aa	Known RBP	3.53	□□□□□ -1.84
LCB2	YDR062W	MIG1	P27705	504 aa		3.53	□□□□□ -1.84
LCB2	YDR062W	TFC1	P32367	649 aa		3.53	□□□□□ -1.84
LCB2	YDR062W	YER137C	P40083	148 aa	Known RBP	3.53	□□□□□ -1.84
LCB2	YDR062W	HPM1	P40481	377 aa		3.53	□□□□□ -1.84
LCB2	YDR062W	GRX5	Q02784	150 aa		3.53	□□□□□ -1.84
LCB2	YDR062W	RAS2	P01120	322 aa	Known RBP	3.52	□□□□□ -1.85
LCB2	YDR062W	PEX4	P29340	183 aa		3.52	□□□□□ -1.85
LCB2	YDR062W	HYR1	P40581	163 aa	Known RBP	3.52	□□□□□ -1.85
LCB2	YDR062W	SFT1	P43682	97 aa		3.52	□□□□□ -1.85
LCB2	YDR062W	RUB1	Q03919	77 aa		3.52	□□□□□ -1.85
LCB2	YDR062W	YPR195C	Q06594	109 aa		3.52	□□□□□ -1.85
LCB2	YDR062W	GPA2	P10823	449 aa		3.52	□□□□□ -1.85
LCB2	YDR062W	RIM9	Q04734	239 aa		3.52	□□□□□ -1.85
LCB2	YDR062W	YPR114W	Q06107	315 aa		3.52	□□□□□ -1.85
LCB2	YDR062W	RRT7	Q07829	113 aa		3.52	□□□□□ -1.85
LCB2	YDR062W	YOL162W	P0CF19	215 aa		3.51	□□□□□ -1.85
LCB2	YDR062W	YBR209W	P38311	105 aa		3.51	□□□□□ -1.85
LCB2	YDR062W	GEP7	P53171	287 aa		3.51	□□□□□ -1.85
LCB2	YDR062W	CUE4	Q04201	117 aa	Predicted RBP	3.51	□□□□□ -1.85
LCB2	YDR062W	ATG10	Q07879	167 aa		3.51	□□□□□ -1.85
LCB2	YDR062W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	3.51	□□□□□ -1.85	not detected
LCB2	YDR062W	YLR118C	Q12354	227 aa		3.51	□□□□□ -1.85
LCB2	YDR062W	MRS4	P23500	304 aa		3.5	□□□□□ -1.85
LCB2	YDR062W	SRX1	P36077	127 aa		3.5	□□□□□ -1.85
LCB2	YDR062W	YPT31	P38555	223 aa	Known RBP	3.5	□□□□□ -1.85
LCB2	YDR062W	EMC4	P53073	190 aa		3.5	□□□□□ -1.85
LCB2	YDR062W	DDP1	Q99321	188 aa	Known RBP	3.5	□□□□□ -1.85
LCB2	YDR062W	FMT1	P32785	401 aa		3.49	□□□□□ -1.85
LCB2	YDR062W	PAC10	P48363	199 aa		3.49	□□□□□ -1.85
LCB2	YDR062W	PIR1	Q03178	341 aa		3.49	□□□□□ -1.85
LCB2	YDR062W	DML1	Q03652	475 aa		3.49	□□□□□ -1.85
LCB2	YDR062W	RNH202	Q05635	350 aa		3.49	□□□□□ -1.85
LCB2	YDR062W	VPS68	Q12016	184 aa		3.49	□□□□□ -1.85
LCB2	YDR062W	YOR015W	Q12169	119 aa		3.49	□□□□□ -1.85
LCB2	YDR062W	KIN28	P06242	306 aa		3.49	□□□□□ -1.85
LCB2	YDR062W	AIM11	P87275	137 aa		3.49	□□□□□ -1.85
LCB2	YDR062W	ELC1	Q03071	99 aa		3.49	□□□□□ -1.85
LCB2	YDR062W	SML1	Q04964	104 aa		3.49	□□□□□ -1.85
LCB2	YDR062W	YKL068W-A	Q3E826	78 aa		3.49	□□□□□ -1.85
LCB2	YDR062W	SVP26	P38869	228 aa		3.48	□□□□□ -1.85
LCB2	YDR062W	UIP4	Q08926	304 aa		3.48	□□□□□ -1.85
LCB2	YDR062W	RAD28	Q12021	506 aa		3.48	□□□□□ -1.85
LCB2	YDR062W	YPR013C	Q12145	317 aa		3.48	□□□□□ -1.85
LCB2	YDR062W	BRR2	P32639	2163 aa	Known RBP	3.47	□□□□□ -1.85
LCB2	YDR062W	YKR070W	P36151	352 aa	Known RBP	3.47	□□□□□ -1.85
LCB2	YDR062W	UPS3	Q04006	179 aa		3.47	□□□□□ -1.85
LCB2	YDR062W	EMC6	Q12431	108 aa		3.47	□□□□□ -1.85
LCB2	YDR062W	IRA2	P19158	3079 aa		3.47	□□□□□ -1.85
LCB2	YDR062W	DDI2	P0CH63	225 aa		3.46	□□□□□ -1.85
LCB2	YDR062W	DDI3	P0CH64	225 aa		3.46	□□□□□ -1.85
LCB2	YDR062W	NOP1	P15646	327 aa	Known RBP	3.46	□□□□□ -1.85
LCB2	YDR062W	MDH2	P22133	377 aa		3.46	□□□□□ -1.85
LCB2	YDR062W	SDH4	P37298	181 aa		3.46	□□□□□ -1.85
LCB2	YDR062W	SAY1	P53324	424 aa		3.46	□□□□□ -1.85
LCB2	YDR062W	DAD3	P69850	94 aa		3.46	□□□□□ -1.85
LCB2	YDR062W	ATG41	Q12048	136 aa		3.46	□□□□□ -1.85
LCB2	YDR062W	SEC11	P15367	167 aa		3.46	□□□□□ -1.86
LCB2	YDR062W	YOR062C	P36025	268 aa		3.46	□□□□□ -1.86
LCB2	YDR062W	TVP18	Q04767	167 aa		3.46	□□□□□ -1.86
LCB2	YDR062W	LDB18	Q07887	179 aa		3.46	□□□□□ -1.86
LCB2	YDR062W	CSI2	Q08054	341 aa		3.46	□□□□□ -1.86
LCB2	YDR062W	YBL010C	P32788	280 aa		3.45	□□□□□ -1.86
LCB2	YDR062W	GSP2	P32836	220 aa	Known RBP	3.45	□□□□□ -1.86
LCB2	YDR062W	CLB6	P32943	380 aa		3.45	□□□□□ -1.86
LCB2	YDR062W	NSE4	P43124	402 aa		3.45	□□□□□ -1.86
LCB2	YDR062W	SPG1	P50088	95 aa		3.45	□□□□□ -1.86
LCB2	YDR062W	UPS1	Q05776	175 aa		3.45	□□□□□ -1.86
LCB2	YDR062W	YPR174C	Q06616	221 aa	Predicted RBP	3.45	□□□□□ -1.86
LCB2	YDR062W	SCS22	Q6Q595	175 aa		3.45	□□□□□ -1.86
LCB2	YDR062W	INO4	P13902	151 aa		3.44	□□□□□ -1.86
LCB2	YDR062W	SPO73	P40031	143 aa		3.44	□□□□□ -1.86
LCB2	YDR062W	RGI1	P40043	161 aa	Predicted RBP	3.44	□□□□□ -1.86
LCB2	YDR062W	PHS1	P40857	217 aa		3.44	□□□□□ -1.86
LCB2	YDR062W	ERG25	P53045	309 aa		3.44	□□□□□ -1.86
LCB2	YDR062W	AIM36	Q03798	255 aa		3.44	□□□□□ -1.86
LCB2	YDR062W	ADK1	P07170	222 aa	Known RBP	3.43	□□□□□ -1.86
LCB2	YDR062W	KNH1	P50112	268 aa		3.43	□□□□□ -1.86
LCB2	YDR062W	ATP19	P81451	68 aa		3.43	□□□□□ -1.86
LCB2	YDR062W	POL2	P21951	2222 aa	Known RBP	3.43	□□□□□ -1.86
LCB2	YDR062W	YHR022C	P38763	256 aa		3.43	□□□□□ -1.86
LCB2	YDR062W	YJL144W	P47009	104 aa		3.43	□□□□□ -1.86
LCB2	YDR062W	THG1	P53215	237 aa	Known RBP	3.43	□□□□□ -1.86
LCB2	YDR062W	POP3	P53833	195 aa	Predicted RBP	3.43	□□□□□ -1.86
LCB2	YDR062W	DAD4	P69851	72 aa		3.43	□□□□□ -1.86

Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms