RNA–Protein interactions for RNA: YDL190C

UFD2, Transcript of Ubiquitin chain assembly factor (E4), yeastyeast

Gene UFD2, Length 2,886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD2YDL190C YBR220CP38318 560 aa0.89□□□□□ -2.27
UFD2YDL190C RPS20P38701 121 aaKnown RBP0.89□□□□□ -2.27
UFD2YDL190C FYV4P38783 130 aaPredicted RBP0.89□□□□□ -2.27
UFD2YDL190C YER181CP40097 107 aa0.89□□□□□ -2.27
UFD2YDL190C SAY1P53324 424 aa0.89□□□□□ -2.27
UFD2YDL190C YKR005CQ02203 525 aa0.89□□□□□ -2.27
UFD2YDL190C YDR391CQ04170 232 aa0.89□□□□□ -2.27
UFD2YDL190C YMR253CQ04835 414 aa0.89□□□□□ -2.27
UFD2YDL190C IRC23Q08416 157 aa0.89□□□□□ -2.27
UFD2YDL190C SPC3Q12133 184 aa0.89□□□□□ -2.27
UFD2YDL190C FCY1Q12178 158 aa0.89□□□□□ -2.27
UFD2YDL190C BOL1Q3E793 110 aa0.89□□□□□ -2.27
UFD2YDL190C RAD6P06104 172 aa0.88□□□□□ -2.27
UFD2YDL190C PHO13P19881 312 aa0.88□□□□□ -2.27
UFD2YDL190C MDH2P22133 377 aa0.88□□□□□ -2.27
UFD2YDL190C SPT14P32363 452 aa0.88□□□□□ -2.27
UFD2YDL190C MRP49P32388 137 aa0.88□□□□□ -2.27
UFD2YDL190C MRPL24P36525 258 aaPredicted RBP0.88□□□□□ -2.27
UFD2YDL190C HTD2P38790 280 aaKnown RBP0.88□□□□□ -2.27
UFD2YDL190C NSA2P40078 261 aaKnown RBP0.88□□□□□ -2.27
UFD2YDL190C AYR1P40471 297 aa0.88□□□□□ -2.27
UFD2YDL190C KNH1P50112 268 aa0.88□□□□□ -2.27
UFD2YDL190C CUE4Q04201 117 aaPredicted RBP0.88□□□□□ -2.27
UFD2YDL190C SYM1Q06563 197 aa0.88□□□□□ -2.27
UFD2YDL190C RAD28Q12021 506 aa0.88□□□□□ -2.27
UFD2YDL190C YIR021W-AQ3E739 70 aa0.88□□□□□ -2.27
UFD2YDL190C FMP49A0A023PZB3 126 aa0.88□□□□□ -2.27
UFD2YDL190C TFC1P32367 649 aa0.88□□□□□ -2.27
UFD2YDL190C VMA7P39111 118 aa0.88□□□□□ -2.27
UFD2YDL190C YNL200CP40165 246 aaKnown RBP0.88□□□□□ -2.27
UFD2YDL190C YJL218WP40892 196 aaKnown RBP0.88□□□□□ -2.27
UFD2YDL190C POP3P53833 195 aaPredicted RBP0.88□□□□□ -2.27
UFD2YDL190C YNL033WP53964 284 aa0.88□□□□□ -2.27
UFD2YDL190C NKP2Q06162 153 aa0.88□□□□□ -2.27
UFD2YDL190C ATP20Q12233 115 aa0.88□□□□□ -2.27
UFD2YDL190C UTP20P35194 2493 aaKnown RBP0.87□□□□□ -2.27
UFD2YDL190C SEC11P15367 167 aa0.87□□□□□ -2.27
UFD2YDL190C AHT1P29589 182 aa0.87□□□□□ -2.27
UFD2YDL190C RIO2P40160 425 aaKnown RBP0.87□□□□□ -2.27
UFD2YDL190C PEP8P40335 379 aa0.87□□□□□ -2.27
UFD2YDL190C ARL3Q02804 198 aa0.87□□□□□ -2.27
UFD2YDL190C EST3Q03096 181 aa0.87□□□□□ -2.27
UFD2YDL190C YPR114WQ06107 315 aa0.87□□□□□ -2.27
UFD2YDL190C ANT1Q06497 328 aa0.87□□□□□ -2.27
UFD2YDL190C YNL277W-AQ3E7Z0 62 aa0.87□□□□□ -2.27
UFD2YDL190C PHO85P17157 305 aa0.87□□□□□ -2.27
UFD2YDL190C YHR140WP38842 239 aa0.87□□□□□ -2.27
UFD2YDL190C YEL028WP39989 153 aa0.87□□□□□ -2.27
UFD2YDL190C YER135CP40082 130 aa0.87□□□□□ -2.27
UFD2YDL190C YGR017WP53210 297 aa0.87□□□□□ -2.27
UFD2YDL190C YNL019CP53975 284 aa0.87□□□□□ -2.27
UFD2YDL190C BUD25P85052 153 aa0.87□□□□□ -2.27
UFD2YDL190C APS2Q00381 147 aa0.87□□□□□ -2.27
UFD2YDL190C FLO9P39712 1322 aa0.87□□□□□ -2.27
UFD2YDL190C SHB17P36136 271 aaKnown RBP0.86□□□□□ -2.27
UFD2YDL190C RRT1P38192 103 aa0.86□□□□□ -2.27
UFD2YDL190C YER137CP40083 148 aaKnown RBP0.86□□□□□ -2.27
UFD2YDL190C HPM1P40481 377 aa0.86□□□□□ -2.27
UFD2YDL190C YNR064CP53750 290 aa0.86□□□□□ -2.27
UFD2YDL190C GRX5Q02784 150 aa0.86□□□□□ -2.27
UFD2YDL190C LIP1Q03579 150 aa0.86□□□□□ -2.27
UFD2YDL190C YLR118CQ12354 227 aa0.86□□□□□ -2.27
UFD2YDL190C TOM1Q03280 3268 aa0.86□□□□□ -2.27
UFD2YDL190C YOR304C-AO14468 76 aa0.86□□□□□ -2.27
UFD2YDL190C MDM35O60200 86 aa0.86□□□□□ -2.27
UFD2YDL190C KIN28P06242 306 aa0.86□□□□□ -2.27
UFD2YDL190C RPS1BP23248 255 aaKnown RBP0.86□□□□□ -2.27
UFD2YDL190C HYM1P32464 399 aa0.86□□□□□ -2.27
UFD2YDL190C YBL010CP32788 280 aa0.86□□□□□ -2.27
UFD2YDL190C YKR045CP36138 183 aa0.86□□□□□ -2.27
UFD2YDL190C TRS20P38334 175 aa0.86□□□□□ -2.27
UFD2YDL190C AIM11P87275 137 aa0.86□□□□□ -2.27
UFD2YDL190C RUB1Q03919 77 aa0.86□□□□□ -2.27
UFD2YDL190C RNH202Q05635 350 aa0.86□□□□□ -2.27
UFD2YDL190C RRT7Q07829 113 aa0.86□□□□□ -2.27
UFD2YDL190C YPR013CQ12145 317 aa0.86□□□□□ -2.27
UFD2YDL190C YLR099W-AQ3E798 87 aa0.86□□□□□ -2.27
UFD2YDL190C UBR1P19812 1950 aa0.86□□□□□ -2.27
UFD2YDL190C GPA2P10823 449 aa0.86□□□□□ -2.27
UFD2YDL190C HSP12P22943 109 aaKnown RBP0.86□□□□□ -2.27
UFD2YDL190C UGX2P32772 223 aa0.86□□□□□ -2.27
UFD2YDL190C GSP1P32835 219 aaKnown RBP0.86□□□□□ -2.27
UFD2YDL190C GSP2P32836 220 aaKnown RBP0.86□□□□□ -2.27
UFD2YDL190C TMA19P35691 167 aaKnown RBP0.86□□□□□ -2.27
UFD2YDL190C YRA2P36036 203 aaKnown RBP RIP-Chip data0.86□□□□□ -2.27not detected
UFD2YDL190C RPL14AP36105 138 aaKnown RBP0.86□□□□□ -2.27
UFD2YDL190C RPL14BP38754 138 aaKnown RBP0.86□□□□□ -2.27
UFD2YDL190C SFT1P43682 97 aa0.86□□□□□ -2.27
UFD2YDL190C EMC4P53073 190 aa0.86□□□□□ -2.27
UFD2YDL190C YDR102CQ03864 110 aa0.86□□□□□ -2.27
UFD2YDL190C RIM9Q04734 239 aa0.86□□□□□ -2.27
UFD2YDL190C YPR174CQ06616 221 aaPredicted RBP0.86□□□□□ -2.27
UFD2YDL190C UIP4Q08926 304 aa0.86□□□□□ -2.27
UFD2YDL190C FAS1P07149 2051 aaKnown RBP0.85□□□□□ -2.27
UFD2YDL190C YHL018WP38744 120 aaPredicted RBP0.85□□□□□ -2.27
UFD2YDL190C YEL073CP39974 107 aa0.85□□□□□ -2.27
UFD2YDL190C RGI1P40043 161 aaPredicted RBP0.85□□□□□ -2.27
UFD2YDL190C PIR1Q03178 341 aa0.85□□□□□ -2.27
UFD2YDL190C AIM36Q03798 255 aa0.85□□□□□ -2.27
UFD2YDL190C COX8P04039 78 aa0.85□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms