RNA–Protein interactions for RNA: YBL079W

NUP170, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP170, Length 4,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP170YBL079W KTI12P34253 313 aaKnown RBP1.68□□□□□ -2.14
NUP170YBL079W LCB3P47013 409 aa1.68□□□□□ -2.14
NUP170YBL079W TOM7P53507 60 aa1.68□□□□□ -2.14
NUP170YBL079W GTO3Q04806 366 aa1.68□□□□□ -2.14
NUP170YBL079W TIM22Q12328 207 aa1.68□□□□□ -2.14
NUP170YBL079W HMRA1P0CY11 126 aa1.68□□□□□ -2.14
NUP170YBL079W MRPL31P14063 131 aaPredicted RBP1.68□□□□□ -2.14
NUP170YBL079W MBB1P39534 108 aa1.68□□□□□ -2.14
NUP170YBL079W PRE5P40302 234 aaKnown RBP1.68□□□□□ -2.14
NUP170YBL079W HCH1P53834 153 aa1.68□□□□□ -2.14
NUP170YBL079W TVP18Q04767 167 aa1.68□□□□□ -2.14
NUP170YBL079W RDS3Q06835 107 aaPredicted RBP1.68□□□□□ -2.14
NUP170YBL079W URA2P07259 2214 aaKnown RBP1.68□□□□□ -2.14
NUP170YBL079W RPL16AP26784 199 aaKnown RBP1.68□□□□□ -2.14
NUP170YBL079W YHR140WP38842 239 aa1.68□□□□□ -2.14
NUP170YBL079W SVP26P38869 228 aa1.68□□□□□ -2.14
NUP170YBL079W YNL217WP40152 326 aa1.68□□□□□ -2.14
NUP170YBL079W URM1P40554 99 aaPredicted RBP1.68□□□□□ -2.14
NUP170YBL079W MST27P53176 234 aa1.68□□□□□ -2.14
NUP170YBL079W APS2Q00381 147 aa1.68□□□□□ -2.14
NUP170YBL079W FIT2Q08906 153 aa1.68□□□□□ -2.14
NUP170YBL079W RPL27AP0C2H6 136 aaKnown RBP1.67□□□□□ -2.14
NUP170YBL079W UBI4P0CG63 381 aaKnown RBP1.67□□□□□ -2.14
NUP170YBL079W YBL059WP34224 193 aa1.67□□□□□ -2.14
NUP170YBL079W PBA1Q05778 276 aa1.67□□□□□ -2.14
NUP170YBL079W UTP20P35194 2493 aaKnown RBP1.67□□□□□ -2.14
NUP170YBL079W TRP1P00912 224 aa1.67□□□□□ -2.14
NUP170YBL079W VHS2P40463 436 aa1.67□□□□□ -2.14
NUP170YBL079W GPI19Q04082 140 aa1.67□□□□□ -2.14
NUP170YBL079W YMR082CQ04276 118 aa1.67□□□□□ -2.14
NUP170YBL079W ZEO1Q08245 113 aa1.67□□□□□ -2.14
NUP170YBL079W SMT3Q12306 101 aaKnown RBP1.67□□□□□ -2.14
NUP170YBL079W SCS22Q6Q595 175 aa1.67□□□□□ -2.14
NUP170YBL079W ARC15P40518 154 aaRIP-Chip data1.67□□□□□ -2.14not detected
NUP170YBL079W YFR045WP43617 309 aa1.67□□□□□ -2.14
NUP170YBL079W RAV2Q03956 351 aa1.67□□□□□ -2.14
NUP170YBL079W AVO2Q04749 426 aa1.67□□□□□ -2.14
NUP170YBL079W HTL1Q9URQ5 78 aa1.67□□□□□ -2.14
NUP170YBL079W DER1P38307 211 aa1.67□□□□□ -2.14
NUP170YBL079W AIM19P40502 157 aa1.67□□□□□ -2.14
NUP170YBL079W IMP2P46972 177 aa1.67□□□□□ -2.14
NUP170YBL079W ATG27P46989 271 aa1.67□□□□□ -2.14
NUP170YBL079W RRT7Q07829 113 aa1.67□□□□□ -2.14
NUP170YBL079W TAR1Q8TGM6 124 aa1.67□□□□□ -2.14
NUP170YBL079W PCL1P24867 279 aa1.66□□□□□ -2.14
NUP170YBL079W RPL32P38061 130 aaKnown RBP1.66□□□□□ -2.14
NUP170YBL079W YIL060WP40519 144 aa1.66□□□□□ -2.14
NUP170YBL079W MMS2P53152 137 aa1.66□□□□□ -2.14
NUP170YBL079W ABF2Q02486 183 aa1.66□□□□□ -2.14
NUP170YBL079W YML108WQ03759 105 aa1.66□□□□□ -2.14
NUP170YBL079W CSM4Q08955 156 aa1.66□□□□□ -2.14
NUP170YBL079W YCR001WP25347 104 aa1.66□□□□□ -2.14
NUP170YBL079W LOC1P43586 204 aaPredicted RBP1.66□□□□□ -2.14
NUP170YBL079W SME1Q12330 94 aaPredicted RBP1.66□□□□□ -2.14
NUP170YBL079W RPS22BQ3E7Y3 130 aaKnown RBP1.66□□□□□ -2.14
NUP170YBL079W TY1A-DR4O74302 440 aa1.66□□□□□ -2.14
NUP170YBL079W TY1A-AP0CX57 440 aa1.66□□□□□ -2.14
NUP170YBL079W TY1A-PR1P0CX58 440 aa1.66□□□□□ -2.14
NUP170YBL079W TY1A-ORP0CX59 440 aa1.66□□□□□ -2.14
NUP170YBL079W TY1A-PR2P0CX60 440 aa1.66□□□□□ -2.14
NUP170YBL079W TY1A-DR5P0CX65 440 aa1.66□□□□□ -2.14
NUP170YBL079W TY1A-ER2P0CX66 440 aa1.66□□□□□ -2.14
NUP170YBL079W TY1A-GR3P0CX67 440 aa1.66□□□□□ -2.14
NUP170YBL079W TY1A-LR1P0CX68 440 aa1.66□□□□□ -2.14
NUP170YBL079W TY1A-MR2P0CX69 440 aa1.66□□□□□ -2.14
NUP170YBL079W LDS1P31379 325 aa1.66□□□□□ -2.14
NUP170YBL079W RPC10P40422 70 aa1.66□□□□□ -2.14
NUP170YBL079W TY1A-JR2P47099 440 aa1.66□□□□□ -2.14
NUP170YBL079W SPG1P50088 95 aa1.66□□□□□ -2.14
NUP170YBL079W TY1A-DR1Q03856 440 aa1.66□□□□□ -2.14
NUP170YBL079W GIM5Q04493 163 aa1.66□□□□□ -2.14
NUP170YBL079W TY1A-ML1Q04706 440 aaKnown RBP1.66□□□□□ -2.14
NUP170YBL079W PEX27Q08580 376 aa1.66□□□□□ -2.14
NUP170YBL079W DGA1Q08650 418 aa1.66□□□□□ -2.14
NUP170YBL079W TY1A-GR2Q12485 440 aa1.66□□□□□ -2.14
NUP170YBL079W CDC43P18898 376 aa1.65□□□□□ -2.14
NUP170YBL079W YDL242WQ07746 117 aa1.65□□□□□ -2.14
NUP170YBL079W NHP2P32495 156 aaPredicted RBP1.65□□□□□ -2.15
NUP170YBL079W APS1P35181 156 aa1.65□□□□□ -2.15
NUP170YBL079W NMA1Q06178 401 aaKnown RBP1.65□□□□□ -2.15
NUP170YBL079W PRM7Q12459 698 aa1.65□□□□□ -2.15
NUP170YBL079W COA3Q3E7B2 85 aa1.65□□□□□ -2.15
NUP170YBL079W KNH1P50112 268 aa1.65□□□□□ -2.15
NUP170YBL079W PAU4P53427 120 aa1.65□□□□□ -2.15
NUP170YBL079W DAD4P69851 72 aa1.65□□□□□ -2.15
NUP170YBL079W YML122CQ03207 126 aa1.65□□□□□ -2.15
NUP170YBL079W DPP1Q05521 289 aa1.65□□□□□ -2.15
NUP170YBL079W TY1A-DR3Q12441 440 aa1.65□□□□□ -2.15
NUP170YBL079W YKR045CP36138 183 aa1.65□□□□□ -2.15
NUP170YBL079W MRPS9P38120 278 aa1.65□□□□□ -2.15
NUP170YBL079W PLP1Q04004 230 aa1.65□□□□□ -2.15
NUP170YBL079W PAU1P0CE88 120 aa1.64□□□□□ -2.15
NUP170YBL079W PAU14P0CE89 120 aa1.64□□□□□ -2.15
NUP170YBL079W PAU6P0CE90 120 aa1.64□□□□□ -2.15
NUP170YBL079W PAU18P0CE91 120 aa1.64□□□□□ -2.15
NUP170YBL079W PAU8P0CE92 120 aa1.64□□□□□ -2.15
NUP170YBL079W PAU11P0CE93 120 aa1.64□□□□□ -2.15
NUP170YBL079W NTF2P33331 125 aaKnown RBP1.64□□□□□ -2.15
NUP170YBL079W MRPL24P36525 258 aaPredicted RBP1.64□□□□□ -2.15
NUP170YBL079W SDH8P38345 138 aa1.64□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 71.2 ms