RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 VHLP40337 213 aa11.46□□□□□ -0.58
SNIP1-204ENST00000638725 ARFIP2P53365 341 aa11.46□□□□□ -0.58
SNIP1-204ENST00000638725 MXRA7P84157 204 aa11.46□□□□□ -0.58
SNIP1-204ENST00000638725 CYP4A22Q5TCH4 519 aa11.46□□□□□ -0.58
SNIP1-204ENST00000638725 SNX30Q5VWJ9 437 aa11.46□□□□□ -0.58
SNIP1-204ENST00000638725 RINLQ6ZS11 566 aa11.46□□□□□ -0.58
SNIP1-204ENST00000638725 TTC7BQ86TV6 843 aa11.46□□□□□ -0.58
SNIP1-204ENST00000638725 NAT8LQ8N9F0 302 aa11.46□□□□□ -0.58
SNIP1-204ENST00000638725 MCPH1Q8NEM0 835 aa11.46□□□□□ -0.58
SNIP1-204ENST00000638725 TMEM120AQ9BXJ8 343 aa11.46□□□□□ -0.58
SNIP1-204ENST00000638725 VPS11Q9H270 941 aa11.46□□□□□ -0.58
SNIP1-204ENST00000638725 KCNK13Q9HB14 408 aa11.46□□□□□ -0.58
SNIP1-204ENST00000638725 CNTN6Q9UQ52 1028 aa11.46□□□□□ -0.58
SNIP1-204ENST00000638725 SIGLEC16A6NMB1 481 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 KIF3CO14782 793 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 GYG2O15488 501 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 RPL22P35268 128 aaKnown RBP11.45□□□□□ -0.58
SNIP1-204ENST00000638725 ZBTB16Q05516 673 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 DLGAP5Q15398 846 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 KLHL38Q2WGJ6 581 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 MTERF2Q49AM1 385 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 PALM2Q8IXS6 379 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 DTX3LQ8TDB6 740 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 WDR60Q8WVS4 1066 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 SKA1Q96BD8 255 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 FAM136AQ96C01 138 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 NSL1Q96IY1 281 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 ZWILCHQ9H900 591 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 AGTPBP1Q9UPW5 1226 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 ARID2Q68CP9 1835 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 LPXNO60711 386 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 BGNP21810 368 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 TBXAS1P24557 533 aaPredicted RBP11.45□□□□□ -0.58
SNIP1-204ENST00000638725 CHRNA5P30532 468 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 PTPN7P35236 360 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 NRLP54845 237 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 CDK16Q00536 496 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 PRKCEQ02156 737 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 GNPTABQ3T906 1256 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 KCNT1Q5JUK3 1230 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 FAM182AQ5T1J6 154 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 PCGF5Q86SE9 256 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 CCDC60Q8IWA6 550 aaPredicted RBP11.45□□□□□ -0.58
SNIP1-204ENST00000638725 ATP6V0A1Q93050 837 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 TTC17Q96AE7 1141 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 MCUR1Q96AQ8 359 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 FAM111AQ96PZ2 611 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 SLC38A10Q9HBR0 1119 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 CYP26B1Q9NR63 512 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 DLGAP2Q9P1A6 1054 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 FETUBQ9UGM5 382 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 SCAF8Q9UPN6 1271 aaKnown RBP11.45□□□□□ -0.58
SNIP1-204ENST00000638725 CHMP2BQ9UQN3 213 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 WDR81Q562E7 1941 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 C3orf70A6NLC5 250 aaPredicted RBP11.45□□□□□ -0.58
SNIP1-204ENST00000638725 CAPN9O14815 690 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 PLSCR1O15162 318 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 CST8O60676 142 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 CALB1P05937 261 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 NEFHP12036 1026 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 HARSP12081 509 aaKnown RBP11.45□□□□□ -0.58
SNIP1-204ENST00000638725 SP100P23497 879 aaPredicted RBP11.45□□□□□ -0.58
SNIP1-204ENST00000638725 RFC5P40937 340 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 NCOA4Q13772 614 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 SPDYE2Q495Y8 402 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 ZC3H12AQ5D1E8 599 aaKnown RBP11.45□□□□□ -0.58
SNIP1-204ENST00000638725 SCYL3Q8IZE3 742 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 RDM1Q8NG50 284 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 SCG3Q8WXD2 468 aaKnown RBP11.45□□□□□ -0.58
SNIP1-204ENST00000638725 TMEM143Q96AN5 459 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 SERAC1Q96JX3 654 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 CGRRF1Q99675 332 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 DDX56Q9NY93 547 aaKnown RBP11.45□□□□□ -0.58
SNIP1-204ENST00000638725 TAS2R1Q9NYW7 299 aa11.45□□□□□ -0.58
SNIP1-204ENST00000638725 E7ESA3 106 aa11.44□□□□□ -0.58
SNIP1-204ENST00000638725 ABLIM1O14639 778 aa11.44□□□□□ -0.58
SNIP1-204ENST00000638725 NDC80O14777 642 aa11.44□□□□□ -0.58
SNIP1-204ENST00000638725 TBX10O75333 385 aa11.44□□□□□ -0.58
SNIP1-204ENST00000638725 PSMG1O95456 288 aa11.44□□□□□ -0.58
SNIP1-204ENST00000638725 MT-ND3P03897 115 aa11.44□□□□□ -0.58
SNIP1-204ENST00000638725 ASNSP08243 561 aa11.44□□□□□ -0.58
SNIP1-204ENST00000638725 RXRBP28702 533 aa11.44□□□□□ -0.58
SNIP1-204ENST00000638725 ZNF132P52740 706 aa11.44□□□□□ -0.58
SNIP1-204ENST00000638725 RCN2Q14257 317 aa11.44□□□□□ -0.58
SNIP1-204ENST00000638725 PIGHQ14442 188 aaPredicted RBP11.44□□□□□ -0.58
SNIP1-204ENST00000638725 LBRQ14739 615 aaKnown RBP11.44□□□□□ -0.58
SNIP1-204ENST00000638725 SGSM1Q2NKQ1 1148 aa11.44□□□□□ -0.58
SNIP1-204ENST00000638725 PPP1R15BQ5SWA1 713 aa11.44□□□□□ -0.58
SNIP1-204ENST00000638725 PPP1R2P3Q6NXS1 205 aa11.44□□□□□ -0.58
SNIP1-204ENST00000638725 IGDCC3Q8IVU1 814 aa11.44□□□□□ -0.58
SNIP1-204ENST00000638725 UNC45BQ8IWX7 931 aa11.44□□□□□ -0.58
SNIP1-204ENST00000638725 VPS52Q8N1B4 723 aa11.44□□□□□ -0.58
SNIP1-204ENST00000638725 ALKBH8Q96BT7 664 aaKnown RBP11.44□□□□□ -0.58
SNIP1-204ENST00000638725 MSTO1Q9BUK6 570 aa11.44□□□□□ -0.58
SNIP1-204ENST00000638725 TARS2Q9BW92 718 aaKnown RBP11.44□□□□□ -0.58
SNIP1-204ENST00000638725 PIDD1Q9HB75 910 aa11.44□□□□□ -0.58
SNIP1-204ENST00000638725 ARMCX1Q9P291 453 aa11.44□□□□□ -0.58
SNIP1-204ENST00000638725 WDR46O15213 610 aaKnown RBP11.44□□□□□ -0.58
SNIP1-204ENST00000638725 SMIM24O75264 130 aa11.44□□□□□ -0.58
SNIP1-204ENST00000638725 RAD17O75943 681 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms