RNA–Protein interactions for RNA: ENST00000637552.1

CHRNA7-229, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-229ENST00000637552 FNBP1Q96RU3 617 aa24.44■■□□□ 1.5
CHRNA7-229ENST00000637552 PKMYT1Q99640 499 aa24.44■■□□□ 1.5
CHRNA7-229ENST00000637552 EPC1Q9H2F5 836 aa24.44■■□□□ 1.5
CHRNA7-229ENST00000637552 SMG5Q9UPR3 1016 aaKnown RBP24.44■■□□□ 1.5
CHRNA7-229ENST00000637552 KIF26AQ9ULI4 1882 aaPredicted RBP24.43■■□□□ 1.5
CHRNA7-229ENST00000637552 HCRTO43612 131 aa24.43■■□□□ 1.5
CHRNA7-229ENST00000637552 DLATP10515 647 aaKnown RBP24.43■■□□□ 1.5
CHRNA7-229ENST00000637552 CXCL12P48061 93 aa24.43■■□□□ 1.5
CHRNA7-229ENST00000637552 CYP2J2P51589 502 aa24.43■■□□□ 1.5
CHRNA7-229ENST00000637552 ITPRIPL2Q3MIP1 535 aa24.43■■□□□ 1.5
CHRNA7-229ENST00000637552 CFAP221Q4G0U5 840 aa24.43■■□□□ 1.5
CHRNA7-229ENST00000637552 DGKKQ5KSL6 1271 aa24.43■■□□□ 1.5
CHRNA7-229ENST00000637552 TXNDC8Q6A555 127 aa24.43■■□□□ 1.5
CHRNA7-229ENST00000637552 TXNDC11Q6PKC3 985 aa24.43■■□□□ 1.5
CHRNA7-229ENST00000637552 NELFCDQ8IXH7 590 aa24.43■■□□□ 1.5
CHRNA7-229ENST00000637552 RDH13Q8NBN7 331 aa24.43■■□□□ 1.5
CHRNA7-229ENST00000637552 SECISBP2LQ93073 1101 aaKnown RBP24.43■■□□□ 1.5
CHRNA7-229ENST00000637552 FUBP3Q96I24 572 aaKnown RBP eCLIP24.43■■□□□ 1.5
CHRNA7-229ENST00000637552 BLZF1Q9H2G9 400 aa24.43■■□□□ 1.5
CHRNA7-229ENST00000637552 KIF9Q9HAQ2 790 aa24.43■■□□□ 1.5
CHRNA7-229ENST00000637552 RBM12Q9NTZ6 932 aaKnown RBP24.43■■□□□ 1.5
CHRNA7-229ENST00000637552 CACNA1AO00555 2505 aa24.42■■□□□ 1.5
CHRNA7-229ENST00000637552 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.42■■□□□ 1.5
CHRNA7-229ENST00000637552 SOBPA7XYQ1 873 aa24.42■■□□□ 1.5
CHRNA7-229ENST00000637552 NOL4O94818 638 aa24.42■■□□□ 1.5
CHRNA7-229ENST00000637552 TNNI1P19237 187 aa24.42■■□□□ 1.5
CHRNA7-229ENST00000637552 FOXK2Q01167 660 aa24.42■■□□□ 1.5
CHRNA7-229ENST00000637552 PON2Q15165 354 aa24.42■■□□□ 1.5
CHRNA7-229ENST00000637552 CCDC142Q17RM4 750 aa24.42■■□□□ 1.5
CHRNA7-229ENST00000637552 ATL3Q6DD88 541 aa24.42■■□□□ 1.5
CHRNA7-229ENST00000637552 C4orf50Q6ZRC1 276 aa24.42■■□□□ 1.5
CHRNA7-229ENST00000637552 MON1AQ86VX9 555 aa24.42■■□□□ 1.5
CHRNA7-229ENST00000637552 SCN4BQ8IWT1 228 aa24.42■■□□□ 1.5
CHRNA7-229ENST00000637552 SPEM1Q8N4L4 309 aa24.42■■□□□ 1.5
CHRNA7-229ENST00000637552 USP13Q92995 863 aaPredicted RBP24.42■■□□□ 1.5
CHRNA7-229ENST00000637552 TRMT2BQ96GJ1 504 aaKnown RBP24.42■■□□□ 1.5
CHRNA7-229ENST00000637552 MMS19Q96T76 1030 aa24.42■■□□□ 1.5
CHRNA7-229ENST00000637552 SYT15Q9BQS2 421 aa24.42■■□□□ 1.5
CHRNA7-229ENST00000637552 TDP1Q9NUW8 608 aa24.42■■□□□ 1.5
CHRNA7-229ENST00000637552 PCDHA7Q9UN72 937 aa24.42■■□□□ 1.5
CHRNA7-229ENST00000637552 CCL26Q9Y258 94 aa24.42■■□□□ 1.5
CHRNA7-229ENST00000637552 CLIC2O15247 247 aa24.41■■□□□ 1.5
CHRNA7-229ENST00000637552 TGFB1I1O43294 461 aa24.41■■□□□ 1.5
CHRNA7-229ENST00000637552 TDGF1P13385 188 aa24.41■■□□□ 1.5
CHRNA7-229ENST00000637552 CASP1P29466 404 aa24.41■■□□□ 1.5
CHRNA7-229ENST00000637552 SNRPFP62306 86 aaKnown RBP24.41■■□□□ 1.5
CHRNA7-229ENST00000637552 SATB1Q01826 763 aa24.41■■□□□ 1.5
CHRNA7-229ENST00000637552 RESP18Q5W5W9 173 aa24.41■■□□□ 1.5
CHRNA7-229ENST00000637552 CC2D1AQ6P1N0 951 aaPredicted RBP24.41■■□□□ 1.5
CHRNA7-229ENST00000637552 TRAPPC11Q7Z392 1133 aa24.41■■□□□ 1.5
CHRNA7-229ENST00000637552 XXYLT1Q8NBI6 393 aa24.41■■□□□ 1.5
CHRNA7-229ENST00000637552 SCFD1Q8WVM8 642 aa24.41■■□□□ 1.5
CHRNA7-229ENST00000637552 CCDC127Q96BQ5 260 aa24.41■■□□□ 1.5
CHRNA7-229ENST00000637552 CGRRF1Q99675 332 aa24.41■■□□□ 1.5
CHRNA7-229ENST00000637552 GKN1Q9NS71 199 aa24.41■■□□□ 1.5
CHRNA7-229ENST00000637552 CFAP45Q9UL16 551 aa24.41■■□□□ 1.5
CHRNA7-229ENST00000637552 CDH9Q9ULB4 789 aa24.41■■□□□ 1.5
CHRNA7-229ENST00000637552 AFMP43652 599 aa24.4■■□□□ 1.5
CHRNA7-229ENST00000637552 PSMC1P62191 440 aaKnown RBP24.4■■□□□ 1.5
CHRNA7-229ENST00000637552 EHHADHQ08426 723 aa24.4■■□□□ 1.5
CHRNA7-229ENST00000637552 GAS6Q14393 721 aa24.4■■□□□ 1.5
CHRNA7-229ENST00000637552 MAPRE1Q15691 268 aaKnown RBP24.4■■□□□ 1.5
CHRNA7-229ENST00000637552 Q6ZS52 159 aa24.4■■□□□ 1.5
CHRNA7-229ENST00000637552 CEP57L1Q8IYX8 460 aa24.4■■□□□ 1.5
CHRNA7-229ENST00000637552 KBTBD7Q8WVZ9 684 aa24.4■■□□□ 1.5
CHRNA7-229ENST00000637552 MYLPFQ96A32 169 aa24.4■■□□□ 1.5
CHRNA7-229ENST00000637552 MYRFLQ96LU7 910 aa24.4■■□□□ 1.5
CHRNA7-229ENST00000637552 TRPC7Q9HCX4 862 aa24.4■■□□□ 1.5
CHRNA7-229ENST00000637552 MAGEC2Q9UBF1 373 aaPredicted RBP24.4■■□□□ 1.5
CHRNA7-229ENST00000637552 RAB23Q9ULC3 237 aa24.4■■□□□ 1.5
CHRNA7-229ENST00000637552 DMXL1Q9Y485 3027 aa24.39■■□□□ 1.5
CHRNA7-229ENST00000637552 PVALEFA0A1B0GWK0 134 aa24.39■■□□□ 1.49
CHRNA7-229ENST00000637552 ATP2C2O75185 946 aa24.39■■□□□ 1.49
CHRNA7-229ENST00000637552 WARSP23381 471 aaKnown RBP24.39■■□□□ 1.49
CHRNA7-229ENST00000637552 MAGEA11P43364 429 aa24.39■■□□□ 1.49
CHRNA7-229ENST00000637552 CYP24A1Q07973 514 aa24.39■■□□□ 1.49
CHRNA7-229ENST00000637552 PSMD6Q15008 389 aa24.39■■□□□ 1.49
CHRNA7-229ENST00000637552 FAM171BQ6P995 826 aa24.39■■□□□ 1.49
CHRNA7-229ENST00000637552 ERMP1Q7Z2K6 904 aa24.39■■□□□ 1.49
CHRNA7-229ENST00000637552 LIMS2Q7Z4I7 341 aa24.39■■□□□ 1.49
CHRNA7-229ENST00000637552 SPRYD3Q8NCJ5 442 aa24.39■■□□□ 1.49
CHRNA7-229ENST00000637552 FAM83CQ9BQN1 747 aa24.39■■□□□ 1.49
CHRNA7-229ENST00000637552 SLC39A2Q9NP94 309 aa24.39■■□□□ 1.49
CHRNA7-229ENST00000637552 CGNQ9P2M7 1197 aaKnown RBP24.39■■□□□ 1.49
CHRNA7-229ENST00000637552 DCHS1Q96JQ0 3298 aa24.39■■□□□ 1.49
CHRNA7-229ENST00000637552 TADA3O75528 432 aa24.38■■□□□ 1.49
CHRNA7-229ENST00000637552 LMO2P25791 158 aa24.38■■□□□ 1.49
CHRNA7-229ENST00000637552 DNM1Q05193 864 aaKnown RBP24.38■■□□□ 1.49
CHRNA7-229ENST00000637552 CUL4BQ13620 913 aa24.38■■□□□ 1.49
CHRNA7-229ENST00000637552 RUNX3Q13761 415 aa24.38■■□□□ 1.49
CHRNA7-229ENST00000637552 ZNF268Q14587 947 aaPredicted RBP24.38■■□□□ 1.49
CHRNA7-229ENST00000637552 SYNPOQ8N3V7 929 aa24.38■■□□□ 1.49
CHRNA7-229ENST00000637552 FSIP1Q8NA03 581 aa24.38■■□□□ 1.49
CHRNA7-229ENST00000637552 TTC16Q8NEE8 873 aa24.38■■□□□ 1.49
CHRNA7-229ENST00000637552 SNX25Q9H3E2 840 aa24.38■■□□□ 1.49
CHRNA7-229ENST00000637552 EBF3Q9H4W6 596 aa24.38■■□□□ 1.49
CHRNA7-229ENST00000637552 GMEB2Q9UKD1 530 aa24.38■■□□□ 1.49
CHRNA7-229ENST00000637552 TRAV19A0A0A6YYK7 116 aa24.37■■□□□ 1.49
CHRNA7-229ENST00000637552 CKMP06732 381 aa24.37■■□□□ 1.49
CHRNA7-229ENST00000637552 PDGFRBP09619 1106 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms