RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 STXBP5Q5T5C0 1151 aa13.56□□□□□ -0.24
CTSD-208ENST00000636843 GPR158Q5T848 1215 aa13.56□□□□□ -0.24
CTSD-208ENST00000636843 LAIR1Q6GTX8 287 aa13.56□□□□□ -0.24
CTSD-208ENST00000636843 THEM5Q8N1Q8 247 aa13.56□□□□□ -0.24
CTSD-208ENST00000636843 OR10T2Q8NGX3 314 aa13.56□□□□□ -0.24
CTSD-208ENST00000636843 C2orf15Q8WU43 125 aaKnown RBP13.56□□□□□ -0.24
CTSD-208ENST00000636843 MKNK1Q9BUB5 465 aa13.56□□□□□ -0.24
CTSD-208ENST00000636843 TASP1Q9H6P5 420 aa13.56□□□□□ -0.24
CTSD-208ENST00000636843 ZMYM5Q9UJ78 669 aa13.56□□□□□ -0.24
CTSD-208ENST00000636843 NFE2L3Q9Y4A8 694 aa13.56□□□□□ -0.24
CTSD-208ENST00000636843 COL4A2P08572 1712 aa13.56□□□□□ -0.24
CTSD-208ENST00000636843 SLC38A8A6NNN8 435 aa13.55□□□□□ -0.24
CTSD-208ENST00000636843 SPECC1L-ADORA2AF8WAN1 911 aa13.55□□□□□ -0.24
CTSD-208ENST00000636843 CYB561D2O14569 222 aa13.55□□□□□ -0.24
CTSD-208ENST00000636843 NRDCO43847 1150 aa13.55□□□□□ -0.24
CTSD-208ENST00000636843 ZNF18P17022 549 aa13.55□□□□□ -0.24
CTSD-208ENST00000636843 TGM1P22735 817 aa13.55□□□□□ -0.24
CTSD-208ENST00000636843 CDC25CP30307 473 aa13.55□□□□□ -0.24
CTSD-208ENST00000636843 CTHP32929 405 aa13.55□□□□□ -0.24
CTSD-208ENST00000636843 TAF6P49848 677 aa13.55□□□□□ -0.24
CTSD-208ENST00000636843 MGAT5BQ3V5L5 792 aa13.55□□□□□ -0.24
CTSD-208ENST00000636843 FILIP1Q7Z7B0 1213 aa13.55□□□□□ -0.24
CTSD-208ENST00000636843 SPPL2BQ8TCT7 592 aa13.55□□□□□ -0.24
CTSD-208ENST00000636843 NAP1L5Q96NT1 182 aaPredicted RBP13.55□□□□□ -0.24
CTSD-208ENST00000636843 GCNAQ96QF7 691 aa13.55□□□□□ -0.24
CTSD-208ENST00000636843 SEPT5Q99719 369 aaPredicted RBP13.55□□□□□ -0.24
CTSD-208ENST00000636843 DPP3Q9NY33 737 aa13.55□□□□□ -0.24
CTSD-208ENST00000636843 USP18Q9UMW8 372 aa13.55□□□□□ -0.24
CTSD-208ENST00000636843 TICRRQ7Z2Z1 1910 aa13.54□□□□□ -0.24
CTSD-208ENST00000636843 LRP3O75074 770 aa13.54□□□□□ -0.24
CTSD-208ENST00000636843 ATP1A3P13637 1013 aa13.54□□□□□ -0.24
CTSD-208ENST00000636843 CDK11BP21127 795 aaKnown RBP13.54□□□□□ -0.24
CTSD-208ENST00000636843 CNR2P34972 360 aa13.54□□□□□ -0.24
CTSD-208ENST00000636843 SOX9P48436 509 aa13.54□□□□□ -0.24
CTSD-208ENST00000636843 ATXN1P54253 815 aaKnown RBP13.54□□□□□ -0.24
CTSD-208ENST00000636843 LRMPQ12912 555 aa13.54□□□□□ -0.24
CTSD-208ENST00000636843 CUL4BQ13620 913 aa13.54□□□□□ -0.24
CTSD-208ENST00000636843 TAF12Q16514 161 aa13.54□□□□□ -0.24
CTSD-208ENST00000636843 ZC2HC1CQ53FD0 456 aaPredicted RBP13.54□□□□□ -0.24
CTSD-208ENST00000636843 DNTTIP2Q5QJE6 756 aaKnown RBP13.54□□□□□ -0.24
CTSD-208ENST00000636843 ZNF720Q7Z2F6 126 aa13.54□□□□□ -0.24
CTSD-208ENST00000636843 TMC6Q7Z403 805 aa13.54□□□□□ -0.24
CTSD-208ENST00000636843 NT5DC4Q86YG4 428 aa13.54□□□□□ -0.24
CTSD-208ENST00000636843 GPIHBP1Q8IV16 184 aa13.54□□□□□ -0.24
CTSD-208ENST00000636843 SYNPOQ8N3V7 929 aa13.54□□□□□ -0.24
CTSD-208ENST00000636843 BPIFB1Q8TDL5 484 aa13.54□□□□□ -0.24
CTSD-208ENST00000636843 HVCN1Q96D96 273 aa13.54□□□□□ -0.24
CTSD-208ENST00000636843 LRRC3BQ96PB8 259 aa13.54□□□□□ -0.24
CTSD-208ENST00000636843 LPIN3Q9BQK8 851 aa13.54□□□□□ -0.24
CTSD-208ENST00000636843 GTPBP4Q9BZE4 634 aaKnown RBP13.54□□□□□ -0.24
CTSD-208ENST00000636843 THG1LQ9NWX6 298 aaKnown RBP13.54□□□□□ -0.24
CTSD-208ENST00000636843 SEL1LQ9UBV2 794 aa13.54□□□□□ -0.24
CTSD-208ENST00000636843 CDV3Q9UKY7 258 aaKnown RBP13.54□□□□□ -0.24
CTSD-208ENST00000636843 IL18RAPO95256 599 aa13.54□□□□□ -0.24
CTSD-208ENST00000636843 RPN1P04843 607 aaKnown RBP13.54□□□□□ -0.24
CTSD-208ENST00000636843 RETP07949 1114 aa13.54□□□□□ -0.24
CTSD-208ENST00000636843 ATF6P18850 670 aa13.54□□□□□ -0.24
CTSD-208ENST00000636843 KCNB1Q14721 858 aa13.54□□□□□ -0.24
CTSD-208ENST00000636843 SV2CQ496J9 727 aa13.54□□□□□ -0.24
CTSD-208ENST00000636843 ZNF658Q5TYW1 1059 aaPredicted RBP13.54□□□□□ -0.24
CTSD-208ENST00000636843 WSCD1Q658N2 575 aa13.54□□□□□ -0.24
CTSD-208ENST00000636843 DCP1BQ8IZD4 617 aaKnown RBP13.54□□□□□ -0.24
CTSD-208ENST00000636843 RTKNQ9BST9 563 aa13.54□□□□□ -0.24
CTSD-208ENST00000636843 IL21Q9HBE4 155 aa13.54□□□□□ -0.24
CTSD-208ENST00000636843 RBM12Q9NTZ6 932 aaKnown RBP13.54□□□□□ -0.24
CTSD-208ENST00000636843 KBTBD4Q9NVX7 518 aa13.54□□□□□ -0.24
CTSD-208ENST00000636843 STK17AQ9UEE5 414 aa13.54□□□□□ -0.24
CTSD-208ENST00000636843 NCOR2Q9Y618 2525 aa13.53□□□□□ -0.24
CTSD-208ENST00000636843 KPNA7A9QM74 516 aa13.53□□□□□ -0.24
CTSD-208ENST00000636843 CHURC1-FNTBB4DL54 471 aa13.53□□□□□ -0.24
CTSD-208ENST00000636843 PPP1R3GB7ZBB8 358 aa13.53□□□□□ -0.24
CTSD-208ENST00000636843 TISP43B9A030 160 aa13.53□□□□□ -0.24
CTSD-208ENST00000636843 K7ESF4 209 aa13.53□□□□□ -0.24
CTSD-208ENST00000636843 PRAMEF12O95522 483 aa13.53□□□□□ -0.24
CTSD-208ENST00000636843 HAPLN1P10915 354 aaPredicted RBP13.53□□□□□ -0.24
CTSD-208ENST00000636843 HOXA6P31267 233 aa13.53□□□□□ -0.24
CTSD-208ENST00000636843 PNPLA4P41247 253 aa13.53□□□□□ -0.24
CTSD-208ENST00000636843 FNTBP49356 437 aa13.53□□□□□ -0.24
CTSD-208ENST00000636843 CYP4F8P98187 520 aa13.53□□□□□ -0.24
CTSD-208ENST00000636843 SIM2Q14190 667 aaPredicted RBP13.53□□□□□ -0.24
CTSD-208ENST00000636843 ITPRIPL2Q3MIP1 535 aa13.53□□□□□ -0.24
CTSD-208ENST00000636843 TXNDC11Q6PKC3 985 aa13.53□□□□□ -0.24
CTSD-208ENST00000636843 CRELD2Q6UXH1 353 aaPredicted RBP13.53□□□□□ -0.24
CTSD-208ENST00000636843 PRR23BQ6ZRT6 265 aa13.53□□□□□ -0.24
CTSD-208ENST00000636843 LRRTM3Q86VH5 581 aa13.53□□□□□ -0.24
CTSD-208ENST00000636843 LONP2Q86WA8 852 aa13.53□□□□□ -0.24
CTSD-208ENST00000636843 SFR1Q86XK3 245 aa13.53□□□□□ -0.24
CTSD-208ENST00000636843 VSTM4Q8IW00 320 aa13.53□□□□□ -0.24
CTSD-208ENST00000636843 GIPC2Q8TF65 315 aa13.53□□□□□ -0.24
CTSD-208ENST00000636843 POMGNT1Q8WZA1 660 aa13.53□□□□□ -0.24
CTSD-208ENST00000636843 CCDC47Q96A33 483 aaKnown RBP13.53□□□□□ -0.24
CTSD-208ENST00000636843 ZFYVE19Q96K21 471 aa13.53□□□□□ -0.24
CTSD-208ENST00000636843 ZNF560Q96MR9 790 aa13.53□□□□□ -0.24
CTSD-208ENST00000636843 PARD6AQ9NPB6 346 aa13.53□□□□□ -0.24
CTSD-208ENST00000636843 GTSE1Q9NYZ3 720 aa13.53□□□□□ -0.24
CTSD-208ENST00000636843 EXOC7Q9UPT5 735 aa13.53□□□□□ -0.24
CTSD-208ENST00000636843 PCDHB5Q9Y5E4 795 aa13.53□□□□□ -0.24
CTSD-208ENST00000636843 DNAH14Q0VDD8 3507 aa13.53□□□□□ -0.24
CTSD-208ENST00000636843 SOBPA7XYQ1 873 aa13.52□□□□□ -0.25
CTSD-208ENST00000636843 HRO43593 1189 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms