RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 HEXIM2Q96MH2 286 aaKnown RBP8.75□□□□□ -1.01
PNKP-226ENST00000636840 NDST4Q9H3R1 872 aa8.75□□□□□ -1.01
PNKP-226ENST00000636840 TMLHEQ9NVH6 421 aa8.75□□□□□ -1.01
PNKP-226ENST00000636840 GDE1Q9NZC3 331 aa8.75□□□□□ -1.01
PNKP-226ENST00000636840 CEP72Q9P209 647 aa8.75□□□□□ -1.01
PNKP-226ENST00000636840 IGSF9Q9P2J2 1179 aa8.75□□□□□ -1.01
PNKP-226ENST00000636840 LIMD1Q9UGP4 676 aa8.75□□□□□ -1.01
PNKP-226ENST00000636840 CDH7Q9ULB5 785 aa8.75□□□□□ -1.01
PNKP-226ENST00000636840 KIAA1257Q9ULG3 409 aa8.75□□□□□ -1.01
PNKP-226ENST00000636840 ATG2AQ2TAZ0 1938 aa8.75□□□□□ -1.01
PNKP-226ENST00000636840 GTPBP10A4D1E9 387 aaKnown RBP8.74□□□□□ -1.01
PNKP-226ENST00000636840 ATP2C2O75185 946 aa8.74□□□□□ -1.01
PNKP-226ENST00000636840 LAMP2P13473 410 aa8.74□□□□□ -1.01
PNKP-226ENST00000636840 SP100P23497 879 aaPredicted RBP8.74□□□□□ -1.01
PNKP-226ENST00000636840 ASPAP45381 313 aa8.74□□□□□ -1.01
PNKP-226ENST00000636840 RAP1GAPP47736 663 aa8.74□□□□□ -1.01
PNKP-226ENST00000636840 PPP3CCP48454 512 aa8.74□□□□□ -1.01
PNKP-226ENST00000636840 NTHL1P78549 312 aa8.74□□□□□ -1.01
PNKP-226ENST00000636840 INCA1Q0VD86 236 aa8.74□□□□□ -1.01
PNKP-226ENST00000636840 CUL2Q13617 745 aa8.74□□□□□ -1.01
PNKP-226ENST00000636840 DDR2Q16832 855 aa8.74□□□□□ -1.01
PNKP-226ENST00000636840 EXOC3L4Q17RC7 722 aa8.74□□□□□ -1.01
PNKP-226ENST00000636840 VWA3BQ502W6 1294 aa8.74□□□□□ -1.01
PNKP-226ENST00000636840 TCP11X2Q5H9J9 407 aa8.74□□□□□ -1.01
PNKP-226ENST00000636840 FKBP15Q5T1M5 1219 aa8.74□□□□□ -1.01
PNKP-226ENST00000636840 SMYD5Q6GMV2 418 aa8.74□□□□□ -1.01
PNKP-226ENST00000636840 MTSS1LQ765P7 747 aa8.74□□□□□ -1.01
PNKP-226ENST00000636840 GET4Q7L5D6 327 aaPredicted RBP8.74□□□□□ -1.01
PNKP-226ENST00000636840 RNF135Q8IUD6 432 aa8.74□□□□□ -1.01
PNKP-226ENST00000636840 PPM1KQ8N3J5 372 aa8.74□□□□□ -1.01
PNKP-226ENST00000636840 MYLPFQ96A32 169 aa8.74□□□□□ -1.01
PNKP-226ENST00000636840 JAKMIP2Q96AA8 810 aa8.74□□□□□ -1.01
PNKP-226ENST00000636840 CYFIP2Q96F07 1278 aa8.74□□□□□ -1.01
PNKP-226ENST00000636840 PCED1BQ96HM7 432 aa8.74□□□□□ -1.01
PNKP-226ENST00000636840 TMEM176AQ96HP8 235 aa8.74□□□□□ -1.01
PNKP-226ENST00000636840 SPATA17Q96L03 361 aa8.74□□□□□ -1.01
PNKP-226ENST00000636840 COL25A1Q9BXS0 654 aaPredicted RBP8.74□□□□□ -1.01
PNKP-226ENST00000636840 DNAJC25Q9H1X3 360 aa8.74□□□□□ -1.01
PNKP-226ENST00000636840 ATXN3LQ9H3M9 355 aa8.74□□□□□ -1.01
PNKP-226ENST00000636840 SLITRK6Q9H5Y7 841 aa8.74□□□□□ -1.01
PNKP-226ENST00000636840 APOBEC3GQ9HC16 384 aaKnown RBP8.74□□□□□ -1.01
PNKP-226ENST00000636840 CRTAC1Q9NQ79 661 aa8.74□□□□□ -1.01
PNKP-226ENST00000636840 CISHQ9NSE2 258 aa8.74□□□□□ -1.01
PNKP-226ENST00000636840 SAMSN1Q9NSI8 373 aaKnown RBP8.74□□□□□ -1.01
PNKP-226ENST00000636840 MAGED2Q9UNF1 606 aaPredicted RBP8.74□□□□□ -1.01
PNKP-226ENST00000636840 PCDHB4Q9Y5E5 795 aa8.74□□□□□ -1.01
PNKP-226ENST00000636840 TTC28Q96AY4 2481 aa8.73□□□□□ -1.01
PNKP-226ENST00000636840 REV3LO60673 3130 aa8.73□□□□□ -1.01
PNKP-226ENST00000636840 SLC38A8A6NNN8 435 aa8.73□□□□□ -1.01
PNKP-226ENST00000636840 SOBPA7XYQ1 873 aa8.73□□□□□ -1.01
PNKP-226ENST00000636840 C2CD4DB7Z1M9 353 aa8.73□□□□□ -1.01
PNKP-226ENST00000636840 DPYSL4O14531 572 aa8.73□□□□□ -1.01
PNKP-226ENST00000636840 CILPO75339 1184 aa8.73□□□□□ -1.01
PNKP-226ENST00000636840 AP1G2O75843 785 aa8.73□□□□□ -1.01
PNKP-226ENST00000636840 RTN3O95197 1032 aaPredicted RBP8.73□□□□□ -1.01
PNKP-226ENST00000636840 FAM200BP0CF97 657 aa8.73□□□□□ -1.01
PNKP-226ENST00000636840 GABRR2P28476 465 aa8.73□□□□□ -1.01
PNKP-226ENST00000636840 ZNF165P49910 485 aa8.73□□□□□ -1.01
PNKP-226ENST00000636840 GCNT1Q02742 428 aa8.73□□□□□ -1.01
PNKP-226ENST00000636840 STILQ15468 1287 aa8.73□□□□□ -1.01
PNKP-226ENST00000636840 ANO6Q4KMQ2 910 aa8.73□□□□□ -1.01
PNKP-226ENST00000636840 FILIP1LQ4L180 1135 aa8.73□□□□□ -1.01
PNKP-226ENST00000636840 ZNF394Q53GI3 561 aa8.73□□□□□ -1.01
PNKP-226ENST00000636840 HSP90AA4PQ58FG1 418 aa8.73□□□□□ -1.01
PNKP-226ENST00000636840 DENND5BQ6ZUT9 1274 aa8.73□□□□□ -1.01
PNKP-226ENST00000636840 IRF2BP1Q8IU81 584 aa8.73□□□□□ -1.01
PNKP-226ENST00000636840 HS6ST3Q8IZP7 471 aa8.73□□□□□ -1.01
PNKP-226ENST00000636840 MRPS31Q92665 395 aaKnown RBP8.73□□□□□ -1.01
PNKP-226ENST00000636840 FGF13Q92913 245 aa8.73□□□□□ -1.01
PNKP-226ENST00000636840 E2F7Q96AV8 911 aa8.73□□□□□ -1.01
PNKP-226ENST00000636840 ELMO3Q96BJ8 720 aa8.73□□□□□ -1.01
PNKP-226ENST00000636840 MCRS1Q96EZ8 462 aa8.73□□□□□ -1.01
PNKP-226ENST00000636840 SMARCD1Q96GM5 515 aa8.73□□□□□ -1.01
PNKP-226ENST00000636840 C8orf48Q96LL4 319 aa8.73□□□□□ -1.01
PNKP-226ENST00000636840 MED15Q96RN5 788 aa8.73□□□□□ -1.01
PNKP-226ENST00000636840 PKMYT1Q99640 499 aa8.73□□□□□ -1.01
PNKP-226ENST00000636840 HNRNPABQ99729 332 aaKnown RBP8.73□□□□□ -1.01
PNKP-226ENST00000636840 CRACR2AQ9BSW2 395 aa8.73□□□□□ -1.01
PNKP-226ENST00000636840 B3GNT5Q9BYG0 378 aa8.73□□□□□ -1.01
PNKP-226ENST00000636840 INTS2Q9H0H0 1204 aaKnown RBP8.73□□□□□ -1.01
PNKP-226ENST00000636840 SDCBP2Q9H190 292 aa8.73□□□□□ -1.01
PNKP-226ENST00000636840 CRISPLD1Q9H336 500 aa8.73□□□□□ -1.01
PNKP-226ENST00000636840 DPEP3Q9H4B8 488 aa8.73□□□□□ -1.01
PNKP-226ENST00000636840 UBE2TQ9NPD8 197 aaPredicted RBP8.73□□□□□ -1.01
PNKP-226ENST00000636840 DMAP1Q9NPF5 467 aaPredicted RBP8.73□□□□□ -1.01
PNKP-226ENST00000636840 FANCLQ9NW38 375 aa8.73□□□□□ -1.01
PNKP-226ENST00000636840 HCFC1R1Q9NWW0 138 aa8.73□□□□□ -1.01
PNKP-226ENST00000636840 COMMD8Q9NX08 183 aa8.73□□□□□ -1.01
PNKP-226ENST00000636840 TRPM5Q9NZQ8 1165 aa8.73□□□□□ -1.01
PNKP-226ENST00000636840 GCNT4Q9P109 453 aa8.73□□□□□ -1.01
PNKP-226ENST00000636840 EPS15L1Q9UBC2 864 aa8.73□□□□□ -1.01
PNKP-226ENST00000636840 HESX1Q9UBX0 185 aa8.73□□□□□ -1.01
PNKP-226ENST00000636840 CDH22Q9UJ99 828 aa8.73□□□□□ -1.01
PNKP-226ENST00000636840 PLXNA3P51805 1871 aa8.72□□□□□ -1.01
PNKP-226ENST00000636840 EYSQ5T1H1 3165 aa8.72□□□□□ -1.01
PNKP-226ENST00000636840 F8VP50 259 aa8.72□□□□□ -1.01
PNKP-226ENST00000636840 GOLGA6L19H0YKK7 550 aa8.72□□□□□ -1.01
PNKP-226ENST00000636840 DCXO43602 365 aa8.72□□□□□ -1.01
PNKP-226ENST00000636840 HCRTO43612 131 aa8.72□□□□□ -1.01
PNKP-226ENST00000636840 SOAT2O75908 522 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms