RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 TAP1Q03518 808 aa15.53■□□□□ 0.08
CACNA1A-220ENST00000635988 EFTUD2Q15029 972 aaKnown RBP eCLIP15.53■□□□□ 0.08
CACNA1A-220ENST00000635988 TKFCQ3LXA3 575 aa15.53■□□□□ 0.08
CACNA1A-220ENST00000635988 ZACNQ401N2 412 aa15.53■□□□□ 0.08
CACNA1A-220ENST00000635988 TBC1D10BQ4KMP7 808 aaPredicted RBP15.53■□□□□ 0.08
CACNA1A-220ENST00000635988 FOXB2Q5VYV0 432 aa15.53■□□□□ 0.08
CACNA1A-220ENST00000635988 RHPN2Q8IUC4 686 aa15.53■□□□□ 0.08
CACNA1A-220ENST00000635988 NAT8LQ8N9F0 302 aa15.53■□□□□ 0.08
CACNA1A-220ENST00000635988 FAM161BQ96MY7 647 aa15.53■□□□□ 0.08
CACNA1A-220ENST00000635988 FNBP1Q96RU3 617 aa15.53■□□□□ 0.08
CACNA1A-220ENST00000635988 ASCC2Q9H1I8 757 aaPredicted RBP15.53■□□□□ 0.08
CACNA1A-220ENST00000635988 VCX3BQ9H321 246 aa15.53■□□□□ 0.08
CACNA1A-220ENST00000635988 VCX3AQ9NNX9 186 aa15.53■□□□□ 0.08
CACNA1A-220ENST00000635988 PCDHB4Q9Y5E5 795 aa15.53■□□□□ 0.08
CACNA1A-220ENST00000635988 UBIAD1Q9Y5Z9 338 aa15.53■□□□□ 0.08
CACNA1A-220ENST00000635988 IVNS1ABPQ9Y6Y0 642 aa15.53■□□□□ 0.08
CACNA1A-220ENST00000635988 GOLGA8RI6L899 631 aa15.52■□□□□ 0.08
CACNA1A-220ENST00000635988 HNRNPDLO14979 420 aaKnown RBP15.52■□□□□ 0.08
CACNA1A-220ENST00000635988 RNF8O76064 485 aa15.52■□□□□ 0.08
CACNA1A-220ENST00000635988 CALB1P05937 261 aa15.52■□□□□ 0.08
CACNA1A-220ENST00000635988 ATP5BP06576 529 aaKnown RBP15.52■□□□□ 0.08
CACNA1A-220ENST00000635988 CDKN2BP42772 138 aa15.52■□□□□ 0.08
CACNA1A-220ENST00000635988 SERPINB4P48594 390 aa15.52■□□□□ 0.08
CACNA1A-220ENST00000635988 JAK3P52333 1124 aa15.52■□□□□ 0.08
CACNA1A-220ENST00000635988 DSG1Q02413 1049 aa15.52■□□□□ 0.08
CACNA1A-220ENST00000635988 SLC18A2Q05940 514 aa15.52■□□□□ 0.08
CACNA1A-220ENST00000635988 CUL2Q13617 745 aa15.52■□□□□ 0.08
CACNA1A-220ENST00000635988 PIGHQ14442 188 aaPredicted RBP15.52■□□□□ 0.08
CACNA1A-220ENST00000635988 TBCCQ15814 346 aa15.52■□□□□ 0.08
CACNA1A-220ENST00000635988 DNAL1Q4LDG9 190 aa15.52■□□□□ 0.08
CACNA1A-220ENST00000635988 PHC3Q8NDX5 983 aa15.52■□□□□ 0.08
CACNA1A-220ENST00000635988 FBXO36Q8NEA4 188 aa15.52■□□□□ 0.08
CACNA1A-220ENST00000635988 CPT1BQ92523 772 aa15.52■□□□□ 0.08
CACNA1A-220ENST00000635988 FAM213AQ9BRX8 229 aa15.52■□□□□ 0.08
CACNA1A-220ENST00000635988 STRIP2Q9ULQ0 834 aa15.52■□□□□ 0.08
CACNA1A-220ENST00000635988 SLC4A7Q9Y6M7 1214 aa15.52■□□□□ 0.08
CACNA1A-220ENST00000635988 B2RBV5 119 aa15.52■□□□□ 0.07
CACNA1A-220ENST00000635988 LYNP07948 512 aa15.52■□□□□ 0.07
CACNA1A-220ENST00000635988 MMP8P22894 467 aa15.52■□□□□ 0.07
CACNA1A-220ENST00000635988 TBXAS1P24557 533 aaPredicted RBP15.52■□□□□ 0.07
CACNA1A-220ENST00000635988 SFNP31947 248 aa15.52■□□□□ 0.07
CACNA1A-220ENST00000635988 PSMD6Q15008 389 aa15.52■□□□□ 0.07
CACNA1A-220ENST00000635988 SAMD3Q8N6K7 520 aa15.52■□□□□ 0.07
CACNA1A-220ENST00000635988 SH2D3AQ9BRG2 576 aa15.52■□□□□ 0.07
CACNA1A-220ENST00000635988 TCEAL9Q9UHQ7 104 aa15.52■□□□□ 0.07
CACNA1A-220ENST00000635988 HERC5Q9UII4 1024 aaKnown RBP15.52■□□□□ 0.07
CACNA1A-220ENST00000635988 CNTN6Q9UQ52 1028 aa15.52■□□□□ 0.07
CACNA1A-220ENST00000635988 COL2A1P02458 1487 aaPredicted RBP15.51■□□□□ 0.07
CACNA1A-220ENST00000635988 PLSCR1O15162 318 aa15.51■□□□□ 0.07
CACNA1A-220ENST00000635988 EXTL3O43909 919 aa15.51■□□□□ 0.07
CACNA1A-220ENST00000635988 BANF1O75531 89 aa15.51■□□□□ 0.07
CACNA1A-220ENST00000635988 ANPEPP15144 967 aa15.51■□□□□ 0.07
CACNA1A-220ENST00000635988 CDK18Q07002 472 aa15.51■□□□□ 0.07
CACNA1A-220ENST00000635988 MTMR1Q13613 665 aa15.51■□□□□ 0.07
CACNA1A-220ENST00000635988 LAMB3Q13751 1172 aa15.51■□□□□ 0.07
CACNA1A-220ENST00000635988 FNBP1LQ5T0N5 605 aa15.51■□□□□ 0.07
CACNA1A-220ENST00000635988 TMEM270Q6UE05 265 aa15.51■□□□□ 0.07
CACNA1A-220ENST00000635988 SCUBE1Q8IWY4 988 aa15.51■□□□□ 0.07
CACNA1A-220ENST00000635988 ZNF516Q92618 1163 aa15.51■□□□□ 0.07
CACNA1A-220ENST00000635988 KIFC3Q9BVG8 833 aa15.51■□□□□ 0.07
CACNA1A-220ENST00000635988 GPAMQ9HCL2 828 aa15.51■□□□□ 0.07
CACNA1A-220ENST00000635988 ALG13Q9NP73 1137 aaKnown RBP15.51■□□□□ 0.07
CACNA1A-220ENST00000635988 NDE1Q9NXR1 346 aa15.51■□□□□ 0.07
CACNA1A-220ENST00000635988 SERPINA10Q9UK55 444 aa15.51■□□□□ 0.07
CACNA1A-220ENST00000635988 PCDHAC2Q9Y5I4 1007 aa15.51■□□□□ 0.07
CACNA1A-220ENST00000635988 H0YCG3 227 aa15.51■□□□□ 0.07
CACNA1A-220ENST00000635988 I3L4J1 428 aa15.51■□□□□ 0.07
CACNA1A-220ENST00000635988 SPAG6O75602 509 aa15.51■□□□□ 0.07
CACNA1A-220ENST00000635988 TM7SF2O76062 418 aa15.51■□□□□ 0.07
CACNA1A-220ENST00000635988 TNNI1P19237 187 aa15.51■□□□□ 0.07
CACNA1A-220ENST00000635988 BGNP21810 368 aa15.51■□□□□ 0.07
CACNA1A-220ENST00000635988 RPL7AP62424 266 aaKnown RBP15.51■□□□□ 0.07
CACNA1A-220ENST00000635988 STRIP1Q5VSL9 837 aa15.51■□□□□ 0.07
CACNA1A-220ENST00000635988 DRAXINQ8NBI3 349 aaPredicted RBP15.51■□□□□ 0.07
CACNA1A-220ENST00000635988 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.51■□□□□ 0.07
CACNA1A-220ENST00000635988 TTC17Q96AE7 1141 aa15.51■□□□□ 0.07
CACNA1A-220ENST00000635988 FAM111AQ96PZ2 611 aa15.51■□□□□ 0.07
CACNA1A-220ENST00000635988 KLF6Q99612 283 aaPredicted RBP15.51■□□□□ 0.07
CACNA1A-220ENST00000635988 CENPKQ9BS16 269 aa15.51■□□□□ 0.07
CACNA1A-220ENST00000635988 IQCGQ9H095 443 aaKnown RBP15.51■□□□□ 0.07
CACNA1A-220ENST00000635988 CNTN3Q9P232 1028 aa15.51■□□□□ 0.07
CACNA1A-220ENST00000635988 WASF2Q9Y6W5 498 aa15.51■□□□□ 0.07
CACNA1A-220ENST00000635988 TMEM150BA6NC51 233 aa15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 WDR64B1ANS9 1081 aa15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 C4BPAP04003 597 aaKnown RBP15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 INHBAP08476 426 aa15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 CFHP08603 1231 aa15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 AMPD1P23109 780 aa15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 CRABP2P29373 138 aa15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 GSTT1P30711 240 aa15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 ACTR3P61158 418 aa15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 PTK7Q13308 1070 aa15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 UGCGQ16739 394 aa15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 MSS51Q4VC12 460 aa15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 RASIP1Q5U651 963 aa15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 DNAJC24Q6P3W2 148 aa15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 DCUN1D2Q6PH85 259 aa15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 POLNQ7Z5Q5 900 aa15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 CCNJLQ8IV13 435 aa15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 KBTBD2Q8IY47 623 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms