RNA–Protein interactions for RNA: ENST00000633627.1

CROCCP4-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

TSL 3 BASIC

Gene CROCCP4, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-202ENST00000633627 TPM2P07951 284 aa20.65■□□□□ 0.9
CROCCP4-202ENST00000633627 BMP1P13497 986 aa20.65■□□□□ 0.9
CROCCP4-202ENST00000633627 CYP2F1P24903 491 aa20.65■□□□□ 0.9
CROCCP4-202ENST00000633627 MTHFRP42898 656 aa20.65■□□□□ 0.9
CROCCP4-202ENST00000633627 MAGEA11P43364 429 aa20.65■□□□□ 0.9
CROCCP4-202ENST00000633627 RAD23BP54727 409 aa20.65■□□□□ 0.9
CROCCP4-202ENST00000633627 YWHAEP62258 255 aaKnown RBP20.65■□□□□ 0.9
CROCCP4-202ENST00000633627 APBA1Q02410 837 aa20.65■□□□□ 0.9
CROCCP4-202ENST00000633627 TWF1Q12792 350 aa20.65■□□□□ 0.9
CROCCP4-202ENST00000633627 CBX2Q14781 532 aaPredicted RBP20.65■□□□□ 0.9
CROCCP4-202ENST00000633627 PAQR9Q6ZVX9 377 aa20.65■□□□□ 0.9
CROCCP4-202ENST00000633627 SPATA2LQ8IUW3 424 aaPredicted RBP20.65■□□□□ 0.9
CROCCP4-202ENST00000633627 RIPOR3Q96MK2 946 aa20.65■□□□□ 0.9
CROCCP4-202ENST00000633627 TSPY26PQ9H489 355 aa20.65■□□□□ 0.9
CROCCP4-202ENST00000633627 UBE2TQ9NPD8 197 aaPredicted RBP20.65■□□□□ 0.9
CROCCP4-202ENST00000633627 CEP72Q9P209 647 aa20.65■□□□□ 0.9
CROCCP4-202ENST00000633627 APEX2Q9UBZ4 518 aa20.65■□□□□ 0.9
CROCCP4-202ENST00000633627 XYLBO75191 536 aa20.64■□□□□ 0.89
CROCCP4-202ENST00000633627 IL9P15248 144 aa20.64■□□□□ 0.89
CROCCP4-202ENST00000633627 ATF6P18850 670 aa20.64■□□□□ 0.89
CROCCP4-202ENST00000633627 MGAT5BQ3V5L5 792 aa20.64■□□□□ 0.89
CROCCP4-202ENST00000633627 GJB7Q6PEY0 223 aa20.64■□□□□ 0.89
CROCCP4-202ENST00000633627 VSTM1Q6UX27 236 aa20.64■□□□□ 0.89
CROCCP4-202ENST00000633627 FUKQ8N0W3 1084 aa20.64■□□□□ 0.89
CROCCP4-202ENST00000633627 C12orf29Q8N999 325 aa20.64■□□□□ 0.89
CROCCP4-202ENST00000633627 SLC4A11Q8NBS3 891 aa20.64■□□□□ 0.89
CROCCP4-202ENST00000633627 JAKMIP2Q96AA8 810 aa20.64■□□□□ 0.89
CROCCP4-202ENST00000633627 NECTIN4Q96NY8 510 aa20.64■□□□□ 0.89
CROCCP4-202ENST00000633627 SEPT5Q99719 369 aaPredicted RBP20.64■□□□□ 0.89
CROCCP4-202ENST00000633627 CNTN6Q9UQ52 1028 aa20.64■□□□□ 0.89
CROCCP4-202ENST00000633627 FAM50BQ9Y247 325 aa20.64■□□□□ 0.89
CROCCP4-202ENST00000633627 CLDN5O00501 218 aa20.63■□□□□ 0.89
CROCCP4-202ENST00000633627 BDNFP23560 247 aa20.63■□□□□ 0.89
CROCCP4-202ENST00000633627 ALDH1A3P47895 512 aa20.63■□□□□ 0.89
CROCCP4-202ENST00000633627 CYP27A1Q02318 531 aa20.63■□□□□ 0.89
CROCCP4-202ENST00000633627 PLD1Q13393 1074 aa20.63■□□□□ 0.89
CROCCP4-202ENST00000633627 ZNF394Q53GI3 561 aa20.63■□□□□ 0.89
CROCCP4-202ENST00000633627 ENOSF1Q7L5Y1 443 aa20.63■□□□□ 0.89
CROCCP4-202ENST00000633627 TMEM176AQ96HP8 235 aa20.63■□□□□ 0.89
CROCCP4-202ENST00000633627 FAM81BQ96LP2 452 aa20.63■□□□□ 0.89
CROCCP4-202ENST00000633627 ZNF518BQ9C0D4 1074 aa20.63■□□□□ 0.89
CROCCP4-202ENST00000633627 POMKQ9H5K3 350 aa20.63■□□□□ 0.89
CROCCP4-202ENST00000633627 PIDD1Q9HB75 910 aa20.63■□□□□ 0.89
CROCCP4-202ENST00000633627 WDR6Q9NNW5 1121 aaKnown RBP20.63■□□□□ 0.89
CROCCP4-202ENST00000633627 DNMT3BQ9UBC3 853 aaKnown RBP20.63■□□□□ 0.89
CROCCP4-202ENST00000633627 NCOR1O75376 2440 aa20.63■□□□□ 0.89
CROCCP4-202ENST00000633627 TCF20Q9UGU0 1960 aaKnown RBP20.63■□□□□ 0.89
CROCCP4-202ENST00000633627 DENND4AQ7Z401 1863 aa20.62■□□□□ 0.89
CROCCP4-202ENST00000633627 GPR15P49685 360 aa20.62■□□□□ 0.89
CROCCP4-202ENST00000633627 EPHB3P54753 998 aa20.62■□□□□ 0.89
CROCCP4-202ENST00000633627 DDR2Q16832 855 aa20.62■□□□□ 0.89
CROCCP4-202ENST00000633627 FKBP15Q5T1M5 1219 aa20.62■□□□□ 0.89
CROCCP4-202ENST00000633627 SMYD5Q6GMV2 418 aa20.62■□□□□ 0.89
CROCCP4-202ENST00000633627 GRASPQ7Z6J2 395 aaPredicted RBP20.62■□□□□ 0.89
CROCCP4-202ENST00000633627 HNRNPABQ99729 332 aaKnown RBP20.62■□□□□ 0.89
CROCCP4-202ENST00000633627 TMEM30AQ9NV96 361 aa20.62■□□□□ 0.89
CROCCP4-202ENST00000633627 HCFC1R1Q9NWW0 138 aa20.62■□□□□ 0.89
CROCCP4-202ENST00000633627 AJAP1Q9UKB5 411 aaPredicted RBP20.62■□□□□ 0.89
CROCCP4-202ENST00000633627 SIK3Q9Y2K2 1263 aa20.62■□□□□ 0.89
CROCCP4-202ENST00000633627 ASB3Q9Y575 518 aa20.62■□□□□ 0.89
CROCCP4-202ENST00000633627 PCDHB4Q9Y5E5 795 aa20.62■□□□□ 0.89
CROCCP4-202ENST00000633627 RNF225M0QZC1 329 aaPredicted RBP20.61■□□□□ 0.89
CROCCP4-202ENST00000633627 CCDC130P13994 396 aa20.61■□□□□ 0.89
CROCCP4-202ENST00000633627 PTPN2P17706 415 aa20.61■□□□□ 0.89
CROCCP4-202ENST00000633627 ZNF132P52740 706 aa20.61■□□□□ 0.89
CROCCP4-202ENST00000633627 CACNA2D1P54289 1103 aa20.61■□□□□ 0.89
CROCCP4-202ENST00000633627 EPHA5P54756 1037 aa20.61■□□□□ 0.89
CROCCP4-202ENST00000633627 MFAP3P55082 362 aa20.61■□□□□ 0.89
CROCCP4-202ENST00000633627 RPL10AP62906 217 aaKnown RBP20.61■□□□□ 0.89
CROCCP4-202ENST00000633627 NTHL1P78549 312 aa20.61■□□□□ 0.89
CROCCP4-202ENST00000633627 KLHDC7AQ5VTJ3 777 aa20.61■□□□□ 0.89
CROCCP4-202ENST00000633627 TMEM270Q6UE05 265 aa20.61■□□□□ 0.89
CROCCP4-202ENST00000633627 FAM35AQ86V20 835 aa20.61■□□□□ 0.89
CROCCP4-202ENST00000633627 SLC2A14Q8TDB8 520 aa20.61■□□□□ 0.89
CROCCP4-202ENST00000633627 PSMG2Q969U7 264 aa20.61■□□□□ 0.89
CROCCP4-202ENST00000633627 CYFIP2Q96F07 1278 aa20.61■□□□□ 0.89
CROCCP4-202ENST00000633627 ZNF512Q96ME7 567 aaPredicted RBP20.61■□□□□ 0.89
CROCCP4-202ENST00000633627 ERGIC2Q96RQ1 377 aa20.61■□□□□ 0.89
CROCCP4-202ENST00000633627 LRRC3Q9BY71 257 aa20.61■□□□□ 0.89
CROCCP4-202ENST00000633627 DNAI2Q9GZS0 605 aa20.61■□□□□ 0.89
CROCCP4-202ENST00000633627 PLCB1Q9NQ66 1216 aa20.61■□□□□ 0.89
CROCCP4-202ENST00000633627 RTN4Q9NQC3 1192 aaKnown RBP20.61■□□□□ 0.89
CROCCP4-202ENST00000633627 AVENQ9NQS1 362 aaPredicted RBP20.61■□□□□ 0.89
CROCCP4-202ENST00000633627 FAM49BQ9NUQ9 324 aa20.61■□□□□ 0.89
CROCCP4-202ENST00000633627 DOCK8Q8NF50 2099 aa20.6■□□□□ 0.89
CROCCP4-202ENST00000633627 CLUHO75153 1309 aa20.6■□□□□ 0.89
CROCCP4-202ENST00000633627 GOLGA6L19H0YKK7 550 aa20.6■□□□□ 0.89
CROCCP4-202ENST00000633627 PAEPP09466 180 aa20.6■□□□□ 0.89
CROCCP4-202ENST00000633627 TRIM21P19474 475 aaKnown RBP20.6■□□□□ 0.89
CROCCP4-202ENST00000633627 TPM4P67936 248 aa20.6■□□□□ 0.89
CROCCP4-202ENST00000633627 UBXN1Q04323 297 aa20.6■□□□□ 0.89
CROCCP4-202ENST00000633627 DNAJB7Q7Z6W7 309 aaPredicted RBP20.6■□□□□ 0.89
CROCCP4-202ENST00000633627 ELMOD1Q8N336 334 aa20.6■□□□□ 0.89
CROCCP4-202ENST00000633627 SHC3Q92529 594 aa20.6■□□□□ 0.89
CROCCP4-202ENST00000633627 C8orf48Q96LL4 319 aa20.6■□□□□ 0.89
CROCCP4-202ENST00000633627 HEXIM2Q96MH2 286 aaKnown RBP20.6■□□□□ 0.89
CROCCP4-202ENST00000633627 PHF7Q9BWX1 381 aaPredicted RBP20.6■□□□□ 0.89
CROCCP4-202ENST00000633627 LSM14BQ9BX40 385 aaKnown RBP20.6■□□□□ 0.89
CROCCP4-202ENST00000633627 NAA15Q9BXJ9 866 aaKnown RBP20.6■□□□□ 0.89
CROCCP4-202ENST00000633627 DNAJC12Q9UKB3 198 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms