RNA–Protein interactions for RNA: ENST00000630147.1

SPTAN1-220, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 785 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-220ENST00000630147 LHX6Q9UPM6 363 aa11.34□□□□□ -0.59
SPTAN1-220ENST00000630147 ANKRD63C9JTQ0 380 aa11.33□□□□□ -0.6
SPTAN1-220ENST00000630147 CYP11A1P05108 521 aa11.33□□□□□ -0.6
SPTAN1-220ENST00000630147 CKMP06732 381 aa11.33□□□□□ -0.6
SPTAN1-220ENST00000630147 HNRNPLP14866 589 aaKnown RBP eCLIP11.33□□□□□ -0.6
SPTAN1-220ENST00000630147 WEE1P30291 646 aa11.33□□□□□ -0.6
SPTAN1-220ENST00000630147 TAF6P49848 677 aa11.33□□□□□ -0.6
SPTAN1-220ENST00000630147 NCKAP1LP55160 1127 aa11.33□□□□□ -0.6
SPTAN1-220ENST00000630147 RING1Q06587 406 aa11.33□□□□□ -0.6
SPTAN1-220ENST00000630147 ACAP1Q15027 740 aa11.33□□□□□ -0.6
SPTAN1-220ENST00000630147 KARSQ15046 597 aaKnown RBP11.33□□□□□ -0.6
SPTAN1-220ENST00000630147 ARSHQ5FYA8 562 aa11.33□□□□□ -0.6
SPTAN1-220ENST00000630147 DEFB119Q8N690 84 aa11.33□□□□□ -0.6
SPTAN1-220ENST00000630147 MYCT1Q8N699 235 aa11.33□□□□□ -0.6
SPTAN1-220ENST00000630147 SYT2Q8N9I0 419 aaPredicted RBP11.33□□□□□ -0.6
SPTAN1-220ENST00000630147 MDGA1Q8NFP4 955 aa11.33□□□□□ -0.6
SPTAN1-220ENST00000630147 LRRC15Q8TF66 581 aa11.33□□□□□ -0.6
SPTAN1-220ENST00000630147 ERLEC1Q96DZ1 483 aa11.33□□□□□ -0.6
SPTAN1-220ENST00000630147 CDK5RAP3Q96JB5 506 aa11.33□□□□□ -0.6
SPTAN1-220ENST00000630147 LINC00597Q9H2U6 94 aa11.33□□□□□ -0.6
SPTAN1-220ENST00000630147 CPSF3Q9UKF6 684 aaKnown RBP11.33□□□□□ -0.6
SPTAN1-220ENST00000630147 CEP192Q8TEP8 1941 aa11.33□□□□□ -0.6
SPTAN1-220ENST00000630147 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.32□□□□□ -0.6
SPTAN1-220ENST00000630147 ANO9A1A5B4 782 aa11.32□□□□□ -0.6
SPTAN1-220ENST00000630147 VWA3AA6NCI4 1184 aa11.32□□□□□ -0.6
SPTAN1-220ENST00000630147 C2orf78A6NCI8 922 aa11.32□□□□□ -0.6
SPTAN1-220ENST00000630147 CYP2F1P24903 491 aa11.32□□□□□ -0.6
SPTAN1-220ENST00000630147 TRAPPC10P48553 1259 aa11.32□□□□□ -0.6
SPTAN1-220ENST00000630147 AMPD2Q01433 879 aa11.32□□□□□ -0.6
SPTAN1-220ENST00000630147 PDGFRLQ15198 375 aa11.32□□□□□ -0.6
SPTAN1-220ENST00000630147 ZNF77Q15935 545 aa11.32□□□□□ -0.6
SPTAN1-220ENST00000630147 EML3Q32P44 896 aa11.32□□□□□ -0.6
SPTAN1-220ENST00000630147 TRIM61Q5EBN2 209 aa11.32□□□□□ -0.6
SPTAN1-220ENST00000630147 MON1AQ86VX9 555 aa11.32□□□□□ -0.6
SPTAN1-220ENST00000630147 GPBP1Q86WP2 473 aa11.32□□□□□ -0.6
SPTAN1-220ENST00000630147 EFCAB13Q8IY85 973 aa11.32□□□□□ -0.6
SPTAN1-220ENST00000630147 TMEFF1Q8IYR6 380 aa11.32□□□□□ -0.6
SPTAN1-220ENST00000630147 ARL14EPQ8N8R7 260 aaPredicted RBP11.32□□□□□ -0.6
SPTAN1-220ENST00000630147 SPPL2BQ8TCT7 592 aa11.32□□□□□ -0.6
SPTAN1-220ENST00000630147 OSCP1Q8WVF1 389 aa11.32□□□□□ -0.6
SPTAN1-220ENST00000630147 ACDQ96AP0 544 aa11.32□□□□□ -0.6
SPTAN1-220ENST00000630147 KIF9Q9HAQ2 790 aa11.32□□□□□ -0.6
SPTAN1-220ENST00000630147 DPP3Q9NY33 737 aa11.32□□□□□ -0.6
SPTAN1-220ENST00000630147 HSFX1Q9UBD0 423 aa11.32□□□□□ -0.6
SPTAN1-220ENST00000630147 PCDHB5Q9Y5E4 795 aa11.32□□□□□ -0.6
SPTAN1-220ENST00000630147 DMXL2Q8TDJ6 3036 aa11.31□□□□□ -0.6
SPTAN1-220ENST00000630147 ITPR1Q14643 2758 aa11.31□□□□□ -0.6
SPTAN1-220ENST00000630147 NBEAQ8NFP9 2946 aa11.31□□□□□ -0.6
SPTAN1-220ENST00000630147 A0A0B4J269 797 aa11.31□□□□□ -0.6
SPTAN1-220ENST00000630147 FAM13AO94988 1023 aa11.31□□□□□ -0.6
SPTAN1-220ENST00000630147 PTGER3P43115 390 aa11.31□□□□□ -0.6
SPTAN1-220ENST00000630147 WNT7BP56706 349 aa11.31□□□□□ -0.6
SPTAN1-220ENST00000630147 MESP2Q0VG99 397 aa11.31□□□□□ -0.6
SPTAN1-220ENST00000630147 USP4Q13107 963 aa11.31□□□□□ -0.6
SPTAN1-220ENST00000630147 FBXO43Q4G163 708 aa11.31□□□□□ -0.6
SPTAN1-220ENST00000630147 USP39Q53GS9 565 aaKnown RBP11.31□□□□□ -0.6
SPTAN1-220ENST00000630147 ADALQ6DHV7 355 aa11.31□□□□□ -0.6
SPTAN1-220ENST00000630147 MCTP1Q6DN14 999 aa11.31□□□□□ -0.6
SPTAN1-220ENST00000630147 C19orf48Q6RUI8 117 aa11.31□□□□□ -0.6
SPTAN1-220ENST00000630147 SCN4BQ8IWT1 228 aa11.31□□□□□ -0.6
SPTAN1-220ENST00000630147 ZSWIM2Q8NEG5 633 aa11.31□□□□□ -0.6
SPTAN1-220ENST00000630147 OR2I1PQ8NGU4 316 aa11.31□□□□□ -0.6
SPTAN1-220ENST00000630147 SH3RF2Q8TEC5 729 aa11.31□□□□□ -0.6
SPTAN1-220ENST00000630147 USP33Q8TEY7 942 aa11.31□□□□□ -0.6
SPTAN1-220ENST00000630147 TIPINQ9BVW5 301 aa11.31□□□□□ -0.6
SPTAN1-220ENST00000630147 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.31□□□□□ -0.6
SPTAN1-220ENST00000630147 TMEM74BQ9NUR3 256 aa11.31□□□□□ -0.6
SPTAN1-220ENST00000630147 LARSQ9P2J5 1176 aaKnown RBP11.31□□□□□ -0.6
SPTAN1-220ENST00000630147 EBF1Q9UH73 591 aa11.31□□□□□ -0.6
SPTAN1-220ENST00000630147 DSEQ9UL01 958 aa11.31□□□□□ -0.6
SPTAN1-220ENST00000630147 STK24Q9Y6E0 443 aa11.31□□□□□ -0.6
SPTAN1-220ENST00000630147 PCNX2A6NKB5 2137 aa11.3□□□□□ -0.6
SPTAN1-220ENST00000630147 SMG1Q96Q15 3661 aaKnown RBP11.3□□□□□ -0.6
SPTAN1-220ENST00000630147 TRAV19A0A0A6YYK7 116 aa11.3□□□□□ -0.6
SPTAN1-220ENST00000630147 KPNA7A9QM74 516 aa11.3□□□□□ -0.6
SPTAN1-220ENST00000630147 K7EQS6 105 aa11.3□□□□□ -0.6
SPTAN1-220ENST00000630147 CFIP05156 583 aa11.3□□□□□ -0.6
SPTAN1-220ENST00000630147 KRT18P05783 430 aaKnown RBP11.3□□□□□ -0.6
SPTAN1-220ENST00000630147 ADRB2P07550 413 aa11.3□□□□□ -0.6
SPTAN1-220ENST00000630147 USP17L7P0C7H9 530 aa11.3□□□□□ -0.6
SPTAN1-220ENST00000630147 CEACAM1P13688 526 aa11.3□□□□□ -0.6
SPTAN1-220ENST00000630147 CSRP1P21291 193 aaKnown RBP11.3□□□□□ -0.6
SPTAN1-220ENST00000630147 DDX6P26196 483 aaKnown RBP eCLIP11.3□□□□□ -0.62e-8■■□□□ 13.3
SPTAN1-220ENST00000630147 POLR2BP30876 1174 aaKnown RBP11.3□□□□□ -0.6
SPTAN1-220ENST00000630147 TIE1P35590 1138 aa11.3□□□□□ -0.6
SPTAN1-220ENST00000630147 OPRD1P41143 372 aa11.3□□□□□ -0.6
SPTAN1-220ENST00000630147 SIM1P81133 766 aaPredicted RBP11.3□□□□□ -0.6
SPTAN1-220ENST00000630147 TSPY1Q01534 308 aa11.3□□□□□ -0.6
SPTAN1-220ENST00000630147 FAM160A1Q05DH4 1040 aa11.3□□□□□ -0.6
SPTAN1-220ENST00000630147 KDSRQ06136 332 aa11.3□□□□□ -0.6
SPTAN1-220ENST00000630147 SV2CQ496J9 727 aa11.3□□□□□ -0.6
SPTAN1-220ENST00000630147 TMEM119Q4V9L6 283 aa11.3□□□□□ -0.6
SPTAN1-220ENST00000630147 TMEM92Q6UXU6 159 aa11.3□□□□□ -0.6
SPTAN1-220ENST00000630147 OSTM1Q86WC4 334 aa11.3□□□□□ -0.6
SPTAN1-220ENST00000630147 DCP1BQ8IZD4 617 aaKnown RBP11.3□□□□□ -0.6
SPTAN1-220ENST00000630147 PDCL2Q8N4E4 241 aa11.3□□□□□ -0.6
SPTAN1-220ENST00000630147 ALLCQ8N6M5 410 aa11.3□□□□□ -0.6
SPTAN1-220ENST00000630147 NOC3LQ8WTT2 800 aaKnown RBP11.3□□□□□ -0.6
SPTAN1-220ENST00000630147 C2orf15Q8WU43 125 aaKnown RBP11.3□□□□□ -0.6
SPTAN1-220ENST00000630147 ATP2A3Q93084 1043 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms