RNA–Protein interactions for RNA: ENST00000628566.2

NR1I3-235, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 5 BASIC

Gene NR1I3, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-235ENST00000628566 PDE6CP51160 858 aa8.3□□□□□ -1.08
NR1I3-235ENST00000628566 NDST1P52848 882 aa8.3□□□□□ -1.08
NR1I3-235ENST00000628566 MFAP3P55082 362 aa8.3□□□□□ -1.08
NR1I3-235ENST00000628566 CDH8P55286 799 aa8.3□□□□□ -1.08
NR1I3-235ENST00000628566 INCA1Q0VD86 236 aa8.3□□□□□ -1.08
NR1I3-235ENST00000628566 CUL2Q13617 745 aa8.3□□□□□ -1.08
NR1I3-235ENST00000628566 KCNJ12Q14500 433 aa8.3□□□□□ -1.08
NR1I3-235ENST00000628566 EXOC3L4Q17RC7 722 aa8.3□□□□□ -1.08
NR1I3-235ENST00000628566 FKBP15Q5T1M5 1219 aa8.3□□□□□ -1.08
NR1I3-235ENST00000628566 SMYD5Q6GMV2 418 aa8.3□□□□□ -1.08
NR1I3-235ENST00000628566 SPOPLQ6IQ16 392 aa8.3□□□□□ -1.08
NR1I3-235ENST00000628566 DNAJB7Q7Z6W7 309 aaPredicted RBP8.3□□□□□ -1.08
NR1I3-235ENST00000628566 LRRTM3Q86VH5 581 aa8.3□□□□□ -1.08
NR1I3-235ENST00000628566 CRYBG2Q8N1P7 616 aa8.3□□□□□ -1.08
NR1I3-235ENST00000628566 EHBP1Q8NDI1 1231 aa8.3□□□□□ -1.08
NR1I3-235ENST00000628566 E2F7Q96AV8 911 aa8.3□□□□□ -1.08
NR1I3-235ENST00000628566 SMARCD1Q96GM5 515 aa8.3□□□□□ -1.08
NR1I3-235ENST00000628566 PCED1BQ96HM7 432 aa8.3□□□□□ -1.08
NR1I3-235ENST00000628566 SPATA17Q96L03 361 aa8.3□□□□□ -1.08
NR1I3-235ENST00000628566 TUBGCP2Q9BSJ2 902 aa8.3□□□□□ -1.08
NR1I3-235ENST00000628566 COL25A1Q9BXS0 654 aaPredicted RBP8.3□□□□□ -1.08
NR1I3-235ENST00000628566 SLITRK6Q9H5Y7 841 aa8.3□□□□□ -1.08
NR1I3-235ENST00000628566 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.3□□□□□ -1.08
NR1I3-235ENST00000628566 CISHQ9NSE2 258 aa8.3□□□□□ -1.08
NR1I3-235ENST00000628566 GCNT4Q9P109 453 aa8.3□□□□□ -1.08
NR1I3-235ENST00000628566 TMEM63CQ9P1W3 806 aa8.3□□□□□ -1.08
NR1I3-235ENST00000628566 EPS15L1Q9UBC2 864 aa8.3□□□□□ -1.08
NR1I3-235ENST00000628566 DNMT3BQ9UBC3 853 aaKnown RBP8.3□□□□□ -1.08
NR1I3-235ENST00000628566 CDH7Q9ULB5 785 aa8.3□□□□□ -1.08
NR1I3-235ENST00000628566 KIAA1257Q9ULG3 409 aa8.3□□□□□ -1.08
NR1I3-235ENST00000628566 UNC80Q8N2C7 3258 aa8.3□□□□□ -1.08
NR1I3-235ENST00000628566 SOBPA7XYQ1 873 aa8.29□□□□□ -1.08
NR1I3-235ENST00000628566 C2CD4DB7Z1M9 353 aa8.29□□□□□ -1.08
NR1I3-235ENST00000628566 DLL1O00548 723 aa8.29□□□□□ -1.08
NR1I3-235ENST00000628566 DCXO43602 365 aa8.29□□□□□ -1.08
NR1I3-235ENST00000628566 ATP2C2O75185 946 aa8.29□□□□□ -1.08
NR1I3-235ENST00000628566 CILPO75339 1184 aa8.29□□□□□ -1.08
NR1I3-235ENST00000628566 RTN3O95197 1032 aaPredicted RBP8.29□□□□□ -1.08
NR1I3-235ENST00000628566 FAM200BP0CF97 657 aa8.29□□□□□ -1.08
NR1I3-235ENST00000628566 LAMP2P13473 410 aa8.29□□□□□ -1.08
NR1I3-235ENST00000628566 RFX1P22670 979 aa8.29□□□□□ -1.08
NR1I3-235ENST00000628566 SP100P23497 879 aaPredicted RBP8.29□□□□□ -1.08
NR1I3-235ENST00000628566 BDNFP23560 247 aa8.29□□□□□ -1.08
NR1I3-235ENST00000628566 CYP2F1P24903 491 aa8.29□□□□□ -1.08
NR1I3-235ENST00000628566 EPHA5P54756 1037 aa8.29□□□□□ -1.08
NR1I3-235ENST00000628566 GCNT1Q02742 428 aa8.29□□□□□ -1.08
NR1I3-235ENST00000628566 LRMPQ12912 555 aa8.29□□□□□ -1.08
NR1I3-235ENST00000628566 MTMR3Q13615 1198 aa8.29□□□□□ -1.08
NR1I3-235ENST00000628566 VWA3BQ502W6 1294 aa8.29□□□□□ -1.08
NR1I3-235ENST00000628566 TCP11X2Q5H9J9 407 aa8.29□□□□□ -1.08
NR1I3-235ENST00000628566 DENND5BQ6ZUT9 1274 aa8.29□□□□□ -1.08
NR1I3-235ENST00000628566 ACOT1Q86TX2 421 aa8.29□□□□□ -1.08
NR1I3-235ENST00000628566 RNF135Q8IUD6 432 aa8.29□□□□□ -1.08
NR1I3-235ENST00000628566 UBALD2Q8IYN6 164 aa8.29□□□□□ -1.08
NR1I3-235ENST00000628566 PDZD8Q8NEN9 1154 aa8.29□□□□□ -1.08
NR1I3-235ENST00000628566 GIPC2Q8TF65 315 aa8.29□□□□□ -1.08
NR1I3-235ENST00000628566 MRPS31Q92665 395 aaKnown RBP8.29□□□□□ -1.08
NR1I3-235ENST00000628566 SEMA4DQ92854 862 aa8.29□□□□□ -1.08
NR1I3-235ENST00000628566 FGF13Q92913 245 aa8.29□□□□□ -1.08
NR1I3-235ENST00000628566 TRMT2BQ96GJ1 504 aaKnown RBP8.29□□□□□ -1.08
NR1I3-235ENST00000628566 TMEM176AQ96HP8 235 aa8.29□□□□□ -1.08
NR1I3-235ENST00000628566 C8orf48Q96LL4 319 aa8.29□□□□□ -1.08
NR1I3-235ENST00000628566 HEXIM2Q96MH2 286 aaKnown RBP8.29□□□□□ -1.08
NR1I3-235ENST00000628566 SLITRK1Q96PX8 696 aa8.29□□□□□ -1.08
NR1I3-235ENST00000628566 PKMYT1Q99640 499 aa8.29□□□□□ -1.08
NR1I3-235ENST00000628566 BPIFA3Q9BQP9 254 aa8.29□□□□□ -1.08
NR1I3-235ENST00000628566 INTS2Q9H0H0 1204 aaKnown RBP8.29□□□□□ -1.08
NR1I3-235ENST00000628566 DNAJC25Q9H1X3 360 aa8.29□□□□□ -1.08
NR1I3-235ENST00000628566 ATXN3LQ9H3M9 355 aa8.29□□□□□ -1.08
NR1I3-235ENST00000628566 NDST4Q9H3R1 872 aa8.29□□□□□ -1.08
NR1I3-235ENST00000628566 APOBEC3GQ9HC16 384 aaKnown RBP8.29□□□□□ -1.08
NR1I3-235ENST00000628566 DMAP1Q9NPF5 467 aaPredicted RBP8.29□□□□□ -1.08
NR1I3-235ENST00000628566 CRTAC1Q9NQ79 661 aa8.29□□□□□ -1.08
NR1I3-235ENST00000628566 TMLHEQ9NVH6 421 aa8.29□□□□□ -1.08
NR1I3-235ENST00000628566 HCFC1R1Q9NWW0 138 aa8.29□□□□□ -1.08
NR1I3-235ENST00000628566 CEP72Q9P209 647 aa8.29□□□□□ -1.08
NR1I3-235ENST00000628566 HESX1Q9UBX0 185 aa8.29□□□□□ -1.08
NR1I3-235ENST00000628566 MAGED2Q9UNF1 606 aaPredicted RBP8.29□□□□□ -1.08
NR1I3-235ENST00000628566 SORCS3Q9UPU3 1222 aa8.29□□□□□ -1.08
NR1I3-235ENST00000628566 SLC38A8A6NNN8 435 aa8.28□□□□□ -1.08
NR1I3-235ENST00000628566 GOLGA6L19H0YKK7 550 aa8.28□□□□□ -1.08
NR1I3-235ENST00000628566 DPYSL4O14531 572 aa8.28□□□□□ -1.08
NR1I3-235ENST00000628566 MED7O43513 233 aa8.28□□□□□ -1.08
NR1I3-235ENST00000628566 AP1G2O75843 785 aa8.28□□□□□ -1.08
NR1I3-235ENST00000628566 SOAT2O75908 522 aa8.28□□□□□ -1.08
NR1I3-235ENST00000628566 VNN2O95498 520 aa8.28□□□□□ -1.08
NR1I3-235ENST00000628566 PAEPP09466 180 aa8.28□□□□□ -1.08
NR1I3-235ENST00000628566 CD19P15391 556 aa8.28□□□□□ -1.08
NR1I3-235ENST00000628566 PFKLP17858 780 aa8.28□□□□□ -1.08
NR1I3-235ENST00000628566 ATF6P18850 670 aa8.28□□□□□ -1.08
NR1I3-235ENST00000628566 GABRR2P28476 465 aa8.28□□□□□ -1.08
NR1I3-235ENST00000628566 AVPR1AP37288 418 aa8.28□□□□□ -1.08
NR1I3-235ENST00000628566 ZNF165P49910 485 aa8.28□□□□□ -1.08
NR1I3-235ENST00000628566 NTHL1P78549 312 aa8.28□□□□□ -1.08
NR1I3-235ENST00000628566 STILQ15468 1287 aa8.28□□□□□ -1.08
NR1I3-235ENST00000628566 PTPN21Q16825 1174 aa8.28□□□□□ -1.08
NR1I3-235ENST00000628566 DDR2Q16832 855 aa8.28□□□□□ -1.08
NR1I3-235ENST00000628566 ANO6Q4KMQ2 910 aa8.28□□□□□ -1.08
NR1I3-235ENST00000628566 FILIP1LQ4L180 1135 aa8.28□□□□□ -1.08
NR1I3-235ENST00000628566 ZNF394Q53GI3 561 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms