RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 CCNE1P24864 410 aa12.97□□□□□ -0.33
UBR1-212ENST00000627960 LMO2P25791 158 aa12.97□□□□□ -0.33
UBR1-212ENST00000627960 DDX6P26196 483 aaKnown RBP eCLIP12.97□□□□□ -0.33
UBR1-212ENST00000627960 MAGEA11P43364 429 aa12.97□□□□□ -0.33
UBR1-212ENST00000627960 KPNA1P52294 538 aaPredicted RBP12.97□□□□□ -0.33
UBR1-212ENST00000627960 KRT85P78386 507 aa12.97□□□□□ -0.33
UBR1-212ENST00000627960 CSTF1Q05048 431 aaKnown RBP12.97□□□□□ -0.33
UBR1-212ENST00000627960 STK4Q13043 487 aa12.97□□□□□ -0.33
UBR1-212ENST00000627960 PSMD2Q13200 908 aa12.97□□□□□ -0.33
UBR1-212ENST00000627960 CCDC142Q17RM4 750 aa12.97□□□□□ -0.33
UBR1-212ENST00000627960 CFAP221Q4G0U5 840 aa12.97□□□□□ -0.33
UBR1-212ENST00000627960 MAMSTRQ6ZN01 415 aa12.97□□□□□ -0.33
UBR1-212ENST00000627960 SPATA2LQ8IUW3 424 aaPredicted RBP12.97□□□□□ -0.33
UBR1-212ENST00000627960 CMTM8Q8IZV2 173 aa12.97□□□□□ -0.33
UBR1-212ENST00000627960 CELF5Q8N6W0 485 aaKnown RBP12.97□□□□□ -0.33
UBR1-212ENST00000627960 STKLD1Q8NE28 680 aa12.97□□□□□ -0.33
UBR1-212ENST00000627960 GOLGA5Q8TBA6 731 aa12.97□□□□□ -0.33
UBR1-212ENST00000627960 BPIFB1Q8TDL5 484 aa12.97□□□□□ -0.33
UBR1-212ENST00000627960 ZNF516Q92618 1163 aa12.97□□□□□ -0.33
UBR1-212ENST00000627960 FUBP3Q96I24 572 aaKnown RBP eCLIP12.97□□□□□ -0.33
UBR1-212ENST00000627960 ZFYVE19Q96K21 471 aa12.97□□□□□ -0.33
UBR1-212ENST00000627960 SPATA32Q96LK8 384 aa12.97□□□□□ -0.33
UBR1-212ENST00000627960 MYRFLQ96LU7 910 aa12.97□□□□□ -0.33
UBR1-212ENST00000627960 MMS19Q96T76 1030 aa12.97□□□□□ -0.33
UBR1-212ENST00000627960 SYT15Q9BQS2 421 aa12.97□□□□□ -0.33
UBR1-212ENST00000627960 GZF1Q9H116 711 aaPredicted RBP12.97□□□□□ -0.33
UBR1-212ENST00000627960 CHRDQ9H2X0 955 aa12.97□□□□□ -0.33
UBR1-212ENST00000627960 C8orf33Q9H7E9 229 aaPredicted RBP12.97□□□□□ -0.33
UBR1-212ENST00000627960 LMAN1LQ9HAT1 526 aa12.97□□□□□ -0.33
UBR1-212ENST00000627960 USP25Q9UHP3 1055 aa12.97□□□□□ -0.33
UBR1-212ENST00000627960 CDH9Q9ULB4 789 aa12.97□□□□□ -0.33
UBR1-212ENST00000627960 MAGED2Q9UNF1 606 aaPredicted RBP12.97□□□□□ -0.33
UBR1-212ENST00000627960 HPSEQ9Y251 543 aa12.97□□□□□ -0.33
UBR1-212ENST00000627960 DMDP11532 3685 aa12.97□□□□□ -0.33
UBR1-212ENST00000627960 SPTBN4Q9H254 2564 aa12.97□□□□□ -0.33
UBR1-212ENST00000627960 CFAP54Q96N23 3096 aa12.97□□□□□ -0.33
UBR1-212ENST00000627960 EP300Q09472 2414 aaPredicted RBP12.97□□□□□ -0.33
UBR1-212ENST00000627960 GVINP1Q7Z2Y8 2422 aa12.97□□□□□ -0.33
UBR1-212ENST00000627960 EXOC3O60645 756 aa12.96□□□□□ -0.33
UBR1-212ENST00000627960 CHRNB1P11230 501 aa12.96□□□□□ -0.33
UBR1-212ENST00000627960 SOX9P48436 509 aa12.96□□□□□ -0.33
UBR1-212ENST00000627960 PLCB2Q00722 1185 aa12.96□□□□□ -0.33
UBR1-212ENST00000627960 MTAPQ13126 283 aa12.96□□□□□ -0.33
UBR1-212ENST00000627960 KMT5BQ4FZB7 885 aa12.96□□□□□ -0.33
UBR1-212ENST00000627960 C1orf228Q6PIY5 440 aa12.96□□□□□ -0.33
UBR1-212ENST00000627960 C4orf50Q6ZRC1 276 aa12.96□□□□□ -0.33
UBR1-212ENST00000627960 MON1AQ86VX9 555 aa12.96□□□□□ -0.33
UBR1-212ENST00000627960 MAB21L3Q8N8X9 362 aa12.96□□□□□ -0.33
UBR1-212ENST00000627960 KIAA0895Q8NCT3 520 aa12.96□□□□□ -0.33
UBR1-212ENST00000627960 MRPS31Q92665 395 aaKnown RBP12.96□□□□□ -0.33
UBR1-212ENST00000627960 TRMT2BQ96GJ1 504 aaKnown RBP12.96□□□□□ -0.33
UBR1-212ENST00000627960 CHAMP1Q96JM3 812 aa12.96□□□□□ -0.33
UBR1-212ENST00000627960 MRPL45Q9BRJ2 306 aaKnown RBP12.96□□□□□ -0.33
UBR1-212ENST00000627960 IER2Q9BTL4 223 aa12.96□□□□□ -0.33
UBR1-212ENST00000627960 SMG9Q9H0W8 520 aaKnown RBP12.96□□□□□ -0.33
UBR1-212ENST00000627960 CRTAC1Q9NQ79 661 aa12.96□□□□□ -0.33
UBR1-212ENST00000627960 PRMT8Q9NR22 394 aaPredicted RBP12.96□□□□□ -0.33
UBR1-212ENST00000627960 EXOC1Q9NV70 894 aa12.96□□□□□ -0.33
UBR1-212ENST00000627960 THG1LQ9NWX6 298 aaKnown RBP12.96□□□□□ -0.33
UBR1-212ENST00000627960 MAGEC2Q9UBF1 373 aaPredicted RBP12.96□□□□□ -0.33
UBR1-212ENST00000627960 UXTQ9UBK9 157 aaPredicted RBP12.96□□□□□ -0.33
UBR1-212ENST00000627960 FAM237AA0A1B0GTK4 181 aa12.95□□□□□ -0.34
UBR1-212ENST00000627960 SPECC1L-ADORA2AF8WAN1 911 aa12.95□□□□□ -0.34
UBR1-212ENST00000627960 TACC1O75410 805 aa12.95□□□□□ -0.34
UBR1-212ENST00000627960 STAU1O95793 577 aaKnown RBP12.95□□□□□ -0.34
UBR1-212ENST00000627960 MYL1P05976 194 aa12.95□□□□□ -0.34
UBR1-212ENST00000627960 PDGFRBP09619 1106 aa12.95□□□□□ -0.34
UBR1-212ENST00000627960 GNL1P36915 607 aaPredicted RBP12.95□□□□□ -0.34
UBR1-212ENST00000627960 AVPR1AP37288 418 aa12.95□□□□□ -0.34
UBR1-212ENST00000627960 PSMC1P62191 440 aaKnown RBP12.95□□□□□ -0.34
UBR1-212ENST00000627960 TRPC3Q13507 836 aa12.95□□□□□ -0.34
UBR1-212ENST00000627960 MAPRE1Q15691 268 aaKnown RBP12.95□□□□□ -0.34
UBR1-212ENST00000627960 TXNDC8Q6A555 127 aa12.95□□□□□ -0.34
UBR1-212ENST00000627960 RALGPS2Q86X27 583 aaPredicted RBP12.95□□□□□ -0.34
UBR1-212ENST00000627960 SLC9A9Q8IVB4 645 aa12.95□□□□□ -0.34
UBR1-212ENST00000627960 SCN4BQ8IWT1 228 aa12.95□□□□□ -0.34
UBR1-212ENST00000627960 TTC8Q8TAM2 541 aa12.95□□□□□ -0.34
UBR1-212ENST00000627960 MYCBPAPQ8TBZ2 947 aa12.95□□□□□ -0.34
UBR1-212ENST00000627960 PLEKHO2Q8TD55 490 aa12.95□□□□□ -0.34
UBR1-212ENST00000627960 TMEM174Q8WUU8 243 aa12.95□□□□□ -0.34
UBR1-212ENST00000627960 NELL1Q92832 810 aa12.95□□□□□ -0.34
UBR1-212ENST00000627960 USP13Q92995 863 aaPredicted RBP12.95□□□□□ -0.34
UBR1-212ENST00000627960 GKN1Q9NS71 199 aa12.95□□□□□ -0.34
UBR1-212ENST00000627960 DMAC2Q9NW81 257 aa12.95□□□□□ -0.34
UBR1-212ENST00000627960 ZSCAN32Q9NX65 697 aa12.95□□□□□ -0.34
UBR1-212ENST00000627960 GTSE1Q9NYZ3 720 aa12.95□□□□□ -0.34
UBR1-212ENST00000627960 PCDHGA2Q9Y5H1 932 aa12.95□□□□□ -0.34
UBR1-212ENST00000627960 OTOGLQ3ZCN5 2332 aa12.94□□□□□ -0.34
UBR1-212ENST00000627960 KINO60870 393 aaKnown RBP12.94□□□□□ -0.34
UBR1-212ENST00000627960 TADA3O75528 432 aa12.94□□□□□ -0.34
UBR1-212ENST00000627960 ATICP31939 592 aa12.94□□□□□ -0.34
UBR1-212ENST00000627960 CTHP32929 405 aa12.94□□□□□ -0.34
UBR1-212ENST00000627960 CASP4P49662 377 aa12.94□□□□□ -0.34
UBR1-212ENST00000627960 AP3M2P53677 418 aa12.94□□□□□ -0.34
UBR1-212ENST00000627960 MYL6P60660 151 aa12.94□□□□□ -0.34
UBR1-212ENST00000627960 TNNC1P63316 161 aa12.94□□□□□ -0.34
UBR1-212ENST00000627960 LRRC32Q14392 662 aa12.94□□□□□ -0.34
UBR1-212ENST00000627960 ZNF268Q14587 947 aaPredicted RBP12.94□□□□□ -0.34
UBR1-212ENST00000627960 ITPRIPL2Q3MIP1 535 aa12.94□□□□□ -0.34
UBR1-212ENST00000627960 WDR72Q3MJ13 1102 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms