RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 WDR44Q5JSH3 913 aa17.85■□□□□ 0.45
UBE3D-208ENST00000626828 SPOPLQ6IQ16 392 aa17.85■□□□□ 0.45
UBE3D-208ENST00000626828 SCN4BQ8IWT1 228 aa17.85■□□□□ 0.45
UBE3D-208ENST00000626828 CRYBG2Q8N1P7 616 aa17.85■□□□□ 0.45
UBE3D-208ENST00000626828 SHKBP1Q8TBC3 707 aa17.85■□□□□ 0.45
UBE3D-208ENST00000626828 FGF14Q92915 247 aa17.85■□□□□ 0.45
UBE3D-208ENST00000626828 MYLPFQ96A32 169 aa17.85■□□□□ 0.45
UBE3D-208ENST00000626828 ELMO3Q96BJ8 720 aa17.85■□□□□ 0.45
UBE3D-208ENST00000626828 PCED1BQ96HM7 432 aa17.85■□□□□ 0.45
UBE3D-208ENST00000626828 SRRTQ9BXP5 876 aaKnown RBP17.85■□□□□ 0.45
UBE3D-208ENST00000626828 DNAI2Q9GZS0 605 aa17.85■□□□□ 0.45
UBE3D-208ENST00000626828 ATXN3LQ9H3M9 355 aa17.85■□□□□ 0.45
UBE3D-208ENST00000626828 RWDD2AQ9UIY3 292 aa17.85■□□□□ 0.45
UBE3D-208ENST00000626828 DUSP12Q9UNI6 340 aa17.85■□□□□ 0.45
UBE3D-208ENST00000626828 COQ4Q9Y3A0 265 aa17.85■□□□□ 0.45
UBE3D-208ENST00000626828 NME7Q9Y5B8 376 aa17.85■□□□□ 0.45
UBE3D-208ENST00000626828 A0A1W2PRU2 124 aa17.84■□□□□ 0.45
UBE3D-208ENST00000626828 ECI2O75521 394 aa17.84■□□□□ 0.45
UBE3D-208ENST00000626828 HMGA1P17096 107 aaKnown RBP17.84■□□□□ 0.45
UBE3D-208ENST00000626828 GJA1P17302 382 aa17.84■□□□□ 0.45
UBE3D-208ENST00000626828 TRIM21P19474 475 aaKnown RBP17.84■□□□□ 0.45
UBE3D-208ENST00000626828 BDNFP23560 247 aa17.84■□□□□ 0.45
UBE3D-208ENST00000626828 GABRR2P28476 465 aa17.84■□□□□ 0.45
UBE3D-208ENST00000626828 CDC25CP30307 473 aa17.84■□□□□ 0.45
UBE3D-208ENST00000626828 GRIK1P39086 918 aa17.84■□□□□ 0.45
UBE3D-208ENST00000626828 RAP1GAPP47736 663 aa17.84■□□□□ 0.45
UBE3D-208ENST00000626828 NOP14P78316 857 aaKnown RBP17.84■□□□□ 0.45
UBE3D-208ENST00000626828 TEAD2Q15562 447 aa17.84■□□□□ 0.45
UBE3D-208ENST00000626828 ARHGAP15Q53QZ3 475 aa17.84■□□□□ 0.45
UBE3D-208ENST00000626828 POTEHQ6S545 545 aa17.84■□□□□ 0.45
UBE3D-208ENST00000626828 SCARA5Q6ZMJ2 495 aa17.84■□□□□ 0.45
UBE3D-208ENST00000626828 GAREM2Q75VX8 874 aa17.84■□□□□ 0.45
UBE3D-208ENST00000626828 B3GALNT2Q8NCR0 500 aa17.84■□□□□ 0.45
UBE3D-208ENST00000626828 GPR152Q8TDT2 470 aa17.84■□□□□ 0.45
UBE3D-208ENST00000626828 SEMA4DQ92854 862 aa17.84■□□□□ 0.45
UBE3D-208ENST00000626828 SLC35C1Q96A29 364 aa17.84■□□□□ 0.45
UBE3D-208ENST00000626828 PBXIP1Q96AQ6 731 aa17.84■□□□□ 0.45
UBE3D-208ENST00000626828 RPP25Q9BUL9 199 aaKnown RBP17.84■□□□□ 0.45
UBE3D-208ENST00000626828 BCO2Q9BYV7 579 aa17.84■□□□□ 0.45
UBE3D-208ENST00000626828 SDCBP2Q9H190 292 aa17.84■□□□□ 0.45
UBE3D-208ENST00000626828 ZFP14Q9HCL3 533 aa17.84■□□□□ 0.45
UBE3D-208ENST00000626828 ZNF334Q9HCZ1 680 aaPredicted RBP17.84■□□□□ 0.45
UBE3D-208ENST00000626828 ZDBF2Q9HCK1 2354 aa17.84■□□□□ 0.45
UBE3D-208ENST00000626828 PMM2O15305 246 aa17.83■□□□□ 0.44
UBE3D-208ENST00000626828 SRFP11831 508 aa17.83■□□□□ 0.44
UBE3D-208ENST00000626828 ASPAP45381 313 aa17.83■□□□□ 0.44
UBE3D-208ENST00000626828 GPR15P49685 360 aa17.83■□□□□ 0.44
UBE3D-208ENST00000626828 NDST1P52848 882 aa17.83■□□□□ 0.44
UBE3D-208ENST00000626828 CCDC142Q17RM4 750 aa17.83■□□□□ 0.44
UBE3D-208ENST00000626828 FAM78AQ5JUQ0 283 aa17.83■□□□□ 0.44
UBE3D-208ENST00000626828 SDHAF4Q5VUM1 108 aa17.83■□□□□ 0.44
UBE3D-208ENST00000626828 TTC39CQ8N584 583 aa17.83■□□□□ 0.44
UBE3D-208ENST00000626828 ST13P5Q8NFI4 369 aaPredicted RBP17.83■□□□□ 0.44
UBE3D-208ENST00000626828 SMARCD2Q92925 531 aa17.83■□□□□ 0.44
UBE3D-208ENST00000626828 E2F7Q96AV8 911 aa17.83■□□□□ 0.44
UBE3D-208ENST00000626828 ELSPBP1Q96BH3 223 aa17.83■□□□□ 0.44
UBE3D-208ENST00000626828 ASIC4Q96FT7 647 aa17.83■□□□□ 0.44
UBE3D-208ENST00000626828 SPATA17Q96L03 361 aa17.83■□□□□ 0.44
UBE3D-208ENST00000626828 ZSWIM3Q96MP5 696 aa17.83■□□□□ 0.44
UBE3D-208ENST00000626828 ASB16Q96NS5 453 aa17.83■□□□□ 0.44
UBE3D-208ENST00000626828 GCNAQ96QF7 691 aa17.83■□□□□ 0.44
UBE3D-208ENST00000626828 NIF3L1Q9GZT8 377 aa17.83■□□□□ 0.44
UBE3D-208ENST00000626828 SMOC2Q9H3U7 446 aa17.83■□□□□ 0.44
UBE3D-208ENST00000626828 DPEP3Q9H4B8 488 aa17.83■□□□□ 0.44
UBE3D-208ENST00000626828 SLITRK6Q9H5Y7 841 aa17.83■□□□□ 0.44
UBE3D-208ENST00000626828 TRPV4Q9HBA0 871 aa17.83■□□□□ 0.44
UBE3D-208ENST00000626828 IL21Q9HBE4 155 aa17.83■□□□□ 0.44
UBE3D-208ENST00000626828 APOBEC3GQ9HC16 384 aaKnown RBP17.83■□□□□ 0.44
UBE3D-208ENST00000626828 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.83■□□□□ 0.44
UBE3D-208ENST00000626828 UXTQ9UBK9 157 aaPredicted RBP17.83■□□□□ 0.44
UBE3D-208ENST00000626828 WNT16Q9UBV4 365 aa17.83■□□□□ 0.44
UBE3D-208ENST00000626828 ZMYM5Q9UJ78 669 aa17.83■□□□□ 0.44
UBE3D-208ENST00000626828 SLC38A8A6NNN8 435 aa17.82■□□□□ 0.44
UBE3D-208ENST00000626828 SOBPA7XYQ1 873 aa17.82■□□□□ 0.44
UBE3D-208ENST00000626828 TRIM66O15016 1216 aa17.82■□□□□ 0.44
UBE3D-208ENST00000626828 NOL4O94818 638 aa17.82■□□□□ 0.44
UBE3D-208ENST00000626828 F11P03951 625 aa17.82■□□□□ 0.44
UBE3D-208ENST00000626828 CCDC192P0DO97 292 aa17.82■□□□□ 0.44
UBE3D-208ENST00000626828 ANXA13P27216 316 aa17.82■□□□□ 0.44
UBE3D-208ENST00000626828 MARSP56192 900 aaKnown RBP17.82■□□□□ 0.44
UBE3D-208ENST00000626828 CETN1Q12798 172 aa17.82■□□□□ 0.44
UBE3D-208ENST00000626828 CBWD6Q4V339 395 aa17.82■□□□□ 0.44
UBE3D-208ENST00000626828 CBWD3Q5JTY5 395 aa17.82■□□□□ 0.44
UBE3D-208ENST00000626828 CBWD5Q5RIA9 395 aa17.82■□□□□ 0.44
UBE3D-208ENST00000626828 TANGO2Q6ICL3 276 aa17.82■□□□□ 0.44
UBE3D-208ENST00000626828 ACOT1Q86TX2 421 aa17.82■□□□□ 0.44
UBE3D-208ENST00000626828 TRMT2BQ96GJ1 504 aaKnown RBP17.82■□□□□ 0.44
UBE3D-208ENST00000626828 C8orf48Q96LL4 319 aa17.82■□□□□ 0.44
UBE3D-208ENST00000626828 MYRFLQ96LU7 910 aa17.82■□□□□ 0.44
UBE3D-208ENST00000626828 B3GNT5Q9BYG0 378 aa17.82■□□□□ 0.44
UBE3D-208ENST00000626828 ELOVL4Q9GZR5 314 aa17.82■□□□□ 0.44
UBE3D-208ENST00000626828 FAM124BQ9H5Z6 455 aaPredicted RBP17.82■□□□□ 0.44
UBE3D-208ENST00000626828 TASP1Q9H6P5 420 aa17.82■□□□□ 0.44
UBE3D-208ENST00000626828 SLC2A4RGQ9NR83 387 aa17.82■□□□□ 0.44
UBE3D-208ENST00000626828 EHD2Q9NZN4 543 aa17.82■□□□□ 0.44
UBE3D-208ENST00000626828 FBXL21Q9UKT6 434 aa17.82■□□□□ 0.44
UBE3D-208ENST00000626828 MAGED2Q9UNF1 606 aaPredicted RBP17.82■□□□□ 0.44
UBE3D-208ENST00000626828 ATP8B3O60423 1300 aa17.81■□□□□ 0.44
UBE3D-208ENST00000626828 NRG2O14511 850 aaPredicted RBP17.81■□□□□ 0.44
UBE3D-208ENST00000626828 P4HA2O15460 535 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms