RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 CNOT8Q9UFF9 292 aaKnown RBP12.46□□□□□ -0.41
LINC00963-220ENST00000625171 TSPAN16Q9UKR8 245 aa12.46□□□□□ -0.41
LINC00963-220ENST00000625171 INPP5FQ9Y2H2 1132 aa12.46□□□□□ -0.41
LINC00963-220ENST00000625171 GRID2IPA4D2P6 1211 aa12.45□□□□□ -0.42
LINC00963-220ENST00000625171 TMCO5BA8MYB1 307 aa12.45□□□□□ -0.42
LINC00963-220ENST00000625171 NRP1O14786 923 aa12.45□□□□□ -0.42
LINC00963-220ENST00000625171 MICAL2O94851 1124 aa12.45□□□□□ -0.42
LINC00963-220ENST00000625171 MOCS3O95396 460 aa12.45□□□□□ -0.42
LINC00963-220ENST00000625171 AMHP03971 560 aa12.45□□□□□ -0.42
LINC00963-220ENST00000625171 CSF2RAP15509 400 aa12.45□□□□□ -0.42
LINC00963-220ENST00000625171 TCP1P17987 556 aaKnown RBP12.45□□□□□ -0.42
LINC00963-220ENST00000625171 ABCB4P21439 1286 aa12.45□□□□□ -0.42
LINC00963-220ENST00000625171 SLC1A1P43005 524 aa12.45□□□□□ -0.42
LINC00963-220ENST00000625171 ACADSBP45954 432 aa12.45□□□□□ -0.42
LINC00963-220ENST00000625171 TUBB4BP68371 445 aa12.45□□□□□ -0.42
LINC00963-220ENST00000625171 RNASELQ05823 741 aaKnown RBP12.45□□□□□ -0.42
LINC00963-220ENST00000625171 MAMLD1Q13495 774 aa12.45□□□□□ -0.42
LINC00963-220ENST00000625171 PPP1R15BQ5SWA1 713 aa12.45□□□□□ -0.42
LINC00963-220ENST00000625171 PPP1R26Q5T8A7 1209 aaPredicted RBP12.45□□□□□ -0.42
LINC00963-220ENST00000625171 DENND1BQ6P3S1 775 aa12.45□□□□□ -0.42
LINC00963-220ENST00000625171 DEFB128Q7Z7B8 93 aa12.45□□□□□ -0.42
LINC00963-220ENST00000625171 ACOT1Q86TX2 421 aa12.45□□□□□ -0.42
LINC00963-220ENST00000625171 OSTM1Q86WC4 334 aa12.45□□□□□ -0.42
LINC00963-220ENST00000625171 GPR65Q8IYL9 337 aa12.45□□□□□ -0.42
LINC00963-220ENST00000625171 THEM5Q8N1Q8 247 aa12.45□□□□□ -0.42
LINC00963-220ENST00000625171 LRRC43Q8N309 656 aa12.45□□□□□ -0.42
LINC00963-220ENST00000625171 C3orf20Q8ND61 904 aa12.45□□□□□ -0.42
LINC00963-220ENST00000625171 C1orf131Q8NDD1 294 aaKnown RBP12.45□□□□□ -0.42
LINC00963-220ENST00000625171 FNIP1Q8TF40 1166 aa12.45□□□□□ -0.42
LINC00963-220ENST00000625171 KCTD13Q8WZ19 329 aa12.45□□□□□ -0.42
LINC00963-220ENST00000625171 ZNF653Q96CK0 615 aa12.45□□□□□ -0.42
LINC00963-220ENST00000625171 C18orf8Q96DM3 657 aa12.45□□□□□ -0.42
LINC00963-220ENST00000625171 MCRS1Q96EZ8 462 aa12.45□□□□□ -0.42
LINC00963-220ENST00000625171 PKMYT1Q99640 499 aa12.45□□□□□ -0.42
LINC00963-220ENST00000625171 TLR10Q9BXR5 811 aa12.45□□□□□ -0.42
LINC00963-220ENST00000625171 HESX1Q9UBX0 185 aa12.45□□□□□ -0.42
LINC00963-220ENST00000625171 PUF60Q9UHX1 559 aaKnown RBP12.45□□□□□ -0.42
LINC00963-220ENST00000625171 CDC23Q9UJX2 597 aa12.45□□□□□ -0.42
LINC00963-220ENST00000625171 COG5Q9UP83 839 aa12.45□□□□□ -0.42
LINC00963-220ENST00000625171 LTBP2Q14767 1821 aa12.44□□□□□ -0.42
LINC00963-220ENST00000625171 TMEM191CA6NGB0 347 aa12.44□□□□□ -0.42
LINC00963-220ENST00000625171 SIGLEC16A6NMB1 481 aa12.44□□□□□ -0.42
LINC00963-220ENST00000625171 MIF4GDA9UHW6 222 aaKnown RBP12.44□□□□□ -0.42
LINC00963-220ENST00000625171 BUB1O43683 1085 aa12.44□□□□□ -0.42
LINC00963-220ENST00000625171 B4GALT3O60512 393 aa12.44□□□□□ -0.42
LINC00963-220ENST00000625171 PALMO75781 387 aa12.44□□□□□ -0.42
LINC00963-220ENST00000625171 CALCAP01258 141 aa12.44□□□□□ -0.42
LINC00963-220ENST00000625171 GALTP07902 379 aa12.44□□□□□ -0.42
LINC00963-220ENST00000625171 RRM1P23921 792 aa12.44□□□□□ -0.42
LINC00963-220ENST00000625171 IGFBP6P24592 240 aaPredicted RBP12.44□□□□□ -0.42
LINC00963-220ENST00000625171 MAN1A1P33908 653 aa12.44□□□□□ -0.42
LINC00963-220ENST00000625171 NOP2P46087 812 aaKnown RBP12.44□□□□□ -0.42
LINC00963-220ENST00000625171 PLA2G4AP47712 749 aa12.44□□□□□ -0.42
LINC00963-220ENST00000625171 BCAT1P54687 386 aa12.44□□□□□ -0.42
LINC00963-220ENST00000625171 BST2Q10589 180 aaKnown RBP12.44□□□□□ -0.42
LINC00963-220ENST00000625171 SMARCB1Q12824 385 aa12.44□□□□□ -0.42
LINC00963-220ENST00000625171 PPIGQ13427 754 aaKnown RBP eCLIP12.44□□□□□ -0.42
LINC00963-220ENST00000625171 ACAP1Q15027 740 aa12.44□□□□□ -0.42
LINC00963-220ENST00000625171 CMTR2Q8IYT2 770 aaKnown RBP12.44□□□□□ -0.42
LINC00963-220ENST00000625171 RNF168Q8IYW5 571 aaPredicted RBP12.44□□□□□ -0.42
LINC00963-220ENST00000625171 SCML4Q8N228 414 aa12.44□□□□□ -0.42
LINC00963-220ENST00000625171 C12orf29Q8N999 325 aa12.44□□□□□ -0.42
LINC00963-220ENST00000625171 MYCBPAPQ8TBZ2 947 aa12.44□□□□□ -0.42
LINC00963-220ENST00000625171 HES6Q96HZ4 224 aa12.44□□□□□ -0.42
LINC00963-220ENST00000625171 RTP3Q9BQQ7 232 aa12.44□□□□□ -0.42
LINC00963-220ENST00000625171 DUSP16Q9BY84 665 aa12.44□□□□□ -0.42
LINC00963-220ENST00000625171 OSGEPQ9NPF4 335 aa12.44□□□□□ -0.42
LINC00963-220ENST00000625171 DDX43Q9NXZ2 648 aaKnown RBP12.44□□□□□ -0.42
LINC00963-220ENST00000625171 CTTNBP2NLQ9P2B4 639 aa12.44□□□□□ -0.42
LINC00963-220ENST00000625171 STK39Q9UEW8 545 aa12.44□□□□□ -0.42
LINC00963-220ENST00000625171 CYTH4Q9UIA0 394 aa12.44□□□□□ -0.42
LINC00963-220ENST00000625171 ADAM28Q9UKQ2 775 aa12.44□□□□□ -0.42
LINC00963-220ENST00000625171 SNX12Q9UMY4 172 aa12.44□□□□□ -0.42
LINC00963-220ENST00000625171 FAN1Q9Y2M0 1017 aa12.44□□□□□ -0.42
LINC00963-220ENST00000625171 SAR1BQ9Y6B6 198 aa12.44□□□□□ -0.42
LINC00963-220ENST00000625171 TDRD15B5MCY1 1934 aaKnown RBP12.44□□□□□ -0.42
LINC00963-220ENST00000625171 XPO1O14980 1071 aaKnown RBP12.43□□□□□ -0.42
LINC00963-220ENST00000625171 BUB1BO60566 1050 aaPredicted RBP12.43□□□□□ -0.42
LINC00963-220ENST00000625171 PDGFRBP09619 1106 aa12.43□□□□□ -0.42
LINC00963-220ENST00000625171 FGFR3P22607 806 aa12.43□□□□□ -0.42
LINC00963-220ENST00000625171 NAP1L1P55209 391 aaKnown RBP12.43□□□□□ -0.42
LINC00963-220ENST00000625171 ITIH3Q06033 890 aa12.43□□□□□ -0.42
LINC00963-220ENST00000625171 PDCLQ13371 301 aa12.43□□□□□ -0.42
LINC00963-220ENST00000625171 SHHQ15465 462 aa12.43□□□□□ -0.42
LINC00963-220ENST00000625171 PTPN20Q4JDL3 420 aa12.43□□□□□ -0.42
LINC00963-220ENST00000625171 OVOS1Q6IE37 1185 aa12.43□□□□□ -0.42
LINC00963-220ENST00000625171 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.43□□□□□ -0.42
LINC00963-220ENST00000625171 PAQR9Q6ZVX9 377 aa12.43□□□□□ -0.42
LINC00963-220ENST00000625171 NT5DC3Q86UY8 548 aa12.43□□□□□ -0.42
LINC00963-220ENST00000625171 TTC30AQ86WT1 665 aa12.43□□□□□ -0.42
LINC00963-220ENST00000625171 FUKQ8N0W3 1084 aa12.43□□□□□ -0.42
LINC00963-220ENST00000625171 NIPA2Q8N8Q9 360 aa12.43□□□□□ -0.42
LINC00963-220ENST00000625171 FEZF2Q8TBJ5 459 aa12.43□□□□□ -0.42
LINC00963-220ENST00000625171 ZNF564Q8TBZ8 553 aaPredicted RBP12.43□□□□□ -0.42
LINC00963-220ENST00000625171 ZNF592Q92610 1267 aa12.43□□□□□ -0.42
LINC00963-220ENST00000625171 SYT15Q9BQS2 421 aa12.43□□□□□ -0.42
LINC00963-220ENST00000625171 NUP85Q9BW27 656 aa12.43□□□□□ -0.42
LINC00963-220ENST00000625171 CSNK1G1Q9HCP0 422 aa12.43□□□□□ -0.42
LINC00963-220ENST00000625171 PNPLA8Q9NP80 782 aa12.43□□□□□ -0.42
LINC00963-220ENST00000625171 CRTAC1Q9NQ79 661 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms