RNA–Protein interactions for RNA: ENST00000623185.3

LINC00963-216, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 786 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-216ENST00000623185 KREMEN2Q8NCW0 462 aa13.24□□□□□ -0.29
LINC00963-216ENST00000623185 ZNF606Q8WXB4 792 aa13.24□□□□□ -0.29
LINC00963-216ENST00000623185 MYLIPQ8WY64 445 aa13.24□□□□□ -0.29
LINC00963-216ENST00000623185 UBXN6Q9BZV1 441 aa13.24□□□□□ -0.29
LINC00963-216ENST00000623185 FBXW11Q9UKB1 542 aa13.24□□□□□ -0.29
LINC00963-216ENST00000623185 HCFC2Q9Y5Z7 792 aa13.24□□□□□ -0.29
LINC00963-216ENST00000623185 PLXNA4Q9HCM2 1894 aa13.23□□□□□ -0.29
LINC00963-216ENST00000623185 MED7O43513 233 aa13.23□□□□□ -0.29
LINC00963-216ENST00000623185 CSPG5O95196 566 aa13.23□□□□□ -0.29
LINC00963-216ENST00000623185 SEC24AO95486 1093 aa13.23□□□□□ -0.29
LINC00963-216ENST00000623185 VNN2O95498 520 aa13.23□□□□□ -0.29
LINC00963-216ENST00000623185 TPM1P09493 284 aa13.23□□□□□ -0.29
LINC00963-216ENST00000623185 HAPLN1P10915 354 aaPredicted RBP13.23□□□□□ -0.29
LINC00963-216ENST00000623185 CDC25BP30305 580 aa13.23□□□□□ -0.29
LINC00963-216ENST00000623185 CYP27A1Q02318 531 aa13.23□□□□□ -0.29
LINC00963-216ENST00000623185 MEA1Q16626 185 aa13.23□□□□□ -0.29
LINC00963-216ENST00000623185 PPP1R26Q5T8A7 1209 aaPredicted RBP13.23□□□□□ -0.29
LINC00963-216ENST00000623185 LCLAT1Q6UWP7 414 aa13.23□□□□□ -0.29
LINC00963-216ENST00000623185 IRF2BP2Q7Z5L9 587 aa13.23□□□□□ -0.29
LINC00963-216ENST00000623185 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.23□□□□□ -0.29
LINC00963-216ENST00000623185 DRC7Q8IY82 874 aa13.23□□□□□ -0.29
LINC00963-216ENST00000623185 ANKRD52Q8NB46 1076 aa13.23□□□□□ -0.29
LINC00963-216ENST00000623185 CPLX3Q8WVH0 158 aa13.23□□□□□ -0.29
LINC00963-216ENST00000623185 TFAP2BQ92481 460 aa13.23□□□□□ -0.29
LINC00963-216ENST00000623185 CASP10Q92851 521 aa13.23□□□□□ -0.29
LINC00963-216ENST00000623185 LPIN3Q9BQK8 851 aa13.23□□□□□ -0.29
LINC00963-216ENST00000623185 IGFLR1Q9H665 355 aa13.23□□□□□ -0.29
LINC00963-216ENST00000623185 CYP4F11Q9HBI6 524 aa13.23□□□□□ -0.29
LINC00963-216ENST00000623185 CSNK1G1Q9HCP0 422 aa13.23□□□□□ -0.29
LINC00963-216ENST00000623185 SLC27A5Q9Y2P5 690 aa13.23□□□□□ -0.29
LINC00963-216ENST00000623185 CHD9Q3L8U1 2897 aa13.23□□□□□ -0.29
LINC00963-216ENST00000623185 ATP8B3O60423 1300 aa13.22□□□□□ -0.29
LINC00963-216ENST00000623185 VWA8A3KMH1 1905 aa13.22□□□□□ -0.29
LINC00963-216ENST00000623185 O00370 1275 aa13.22□□□□□ -0.29
LINC00963-216ENST00000623185 ZMYND10O75800 440 aa13.22□□□□□ -0.29
LINC00963-216ENST00000623185 GFPT2O94808 682 aa13.22□□□□□ -0.29
LINC00963-216ENST00000623185 GYPCP04921 128 aa13.22□□□□□ -0.29
LINC00963-216ENST00000623185 HNRNPA1P09651 372 aaKnown RBP eCLIP13.22□□□□□ -0.29
LINC00963-216ENST00000623185 SPATA31D3P0C874 917 aa13.22□□□□□ -0.29
LINC00963-216ENST00000623185 SRGAP2BP0DMP2 458 aa13.22□□□□□ -0.29
LINC00963-216ENST00000623185 CD19P15391 556 aa13.22□□□□□ -0.29
LINC00963-216ENST00000623185 FOSL2P15408 326 aa13.22□□□□□ -0.29
LINC00963-216ENST00000623185 CYP11B1P15538 503 aa13.22□□□□□ -0.29
LINC00963-216ENST00000623185 EPCAMP16422 314 aa13.22□□□□□ -0.29
LINC00963-216ENST00000623185 FERP16591 822 aa13.22□□□□□ -0.29
LINC00963-216ENST00000623185 HOXB8P17481 243 aaPredicted RBP13.22□□□□□ -0.29
LINC00963-216ENST00000623185 BDNFP23560 247 aa13.22□□□□□ -0.29
LINC00963-216ENST00000623185 CYP2F1P24903 491 aa13.22□□□□□ -0.29
LINC00963-216ENST00000623185 GNA15P30679 374 aa13.22□□□□□ -0.29
LINC00963-216ENST00000623185 HOXA9P31269 272 aa13.22□□□□□ -0.29
LINC00963-216ENST00000623185 HNRNPH3P31942 346 aaKnown RBP13.22□□□□□ -0.29
LINC00963-216ENST00000623185 CASP14P31944 242 aa13.22□□□□□ -0.29
LINC00963-216ENST00000623185 KRT9P35527 623 aa13.22□□□□□ -0.29
LINC00963-216ENST00000623185 RPL10AP62906 217 aaKnown RBP13.22□□□□□ -0.29
LINC00963-216ENST00000623185 ORC1Q13415 861 aa13.22□□□□□ -0.29
LINC00963-216ENST00000623185 ARID5BQ14865 1188 aa13.22□□□□□ -0.29
LINC00963-216ENST00000623185 SFMBT2Q5VUG0 894 aa13.22□□□□□ -0.29
LINC00963-216ENST00000623185 CYP26C1Q6V0L0 522 aa13.22□□□□□ -0.29
LINC00963-216ENST00000623185 SPATA31D4Q6ZUB0 917 aa13.22□□□□□ -0.29
LINC00963-216ENST00000623185 SLC47A2Q86VL8 602 aa13.22□□□□□ -0.29
LINC00963-216ENST00000623185 ZNF677Q86XU0 584 aa13.22□□□□□ -0.29
LINC00963-216ENST00000623185 OR8K1Q8NGG5 319 aa13.22□□□□□ -0.29
LINC00963-216ENST00000623185 SLC2A14Q8TDB8 520 aa13.22□□□□□ -0.29
LINC00963-216ENST00000623185 MYLPFQ96A32 169 aa13.22□□□□□ -0.29
LINC00963-216ENST00000623185 C8orf48Q96LL4 319 aa13.22□□□□□ -0.29
LINC00963-216ENST00000623185 PGLYRP2Q96PD5 576 aa13.22□□□□□ -0.29
LINC00963-216ENST00000623185 ZSWIM1Q9BR11 485 aa13.22□□□□□ -0.29
LINC00963-216ENST00000623185 DUSP16Q9BY84 665 aa13.22□□□□□ -0.29
LINC00963-216ENST00000623185 LHX5Q9H2C1 402 aa13.22□□□□□ -0.29
LINC00963-216ENST00000623185 ZDHHC7Q9NXF8 308 aa13.22□□□□□ -0.29
LINC00963-216ENST00000623185 ABI2Q9NYB9 513 aaPredicted RBP13.22□□□□□ -0.29
LINC00963-216ENST00000623185 IMPACTQ9P2X3 320 aa13.22□□□□□ -0.29
LINC00963-216ENST00000623185 PCDHGC3Q9UN70 934 aa13.22□□□□□ -0.29
LINC00963-216ENST00000623185 BZW2Q9Y6E2 419 aaKnown RBP13.22□□□□□ -0.29
LINC00963-216ENST00000623185 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.21□□□□□ -0.29
LINC00963-216ENST00000623185 LRRC53A6NM62 1247 aa13.21□□□□□ -0.29
LINC00963-216ENST00000623185 CLDN5O00501 218 aa13.21□□□□□ -0.29
LINC00963-216ENST00000623185 PRRG1O14668 218 aa13.21□□□□□ -0.29
LINC00963-216ENST00000623185 POU2F2P09086 479 aa13.21□□□□□ -0.29
LINC00963-216ENST00000623185 GTF2F1P35269 517 aaKnown RBP eCLIP13.21□□□□□ -0.291e-6■■■■■ 32
LINC00963-216ENST00000623185 GRIK1P39086 918 aa13.21□□□□□ -0.29
LINC00963-216ENST00000623185 ALDH1A3P47895 512 aa13.21□□□□□ -0.29
LINC00963-216ENST00000623185 SLC8A3P57103 927 aa13.21□□□□□ -0.29
LINC00963-216ENST00000623185 MGAT5BQ3V5L5 792 aa13.21□□□□□ -0.29
LINC00963-216ENST00000623185 PKDCCQ504Y2 493 aa13.21□□□□□ -0.29
LINC00963-216ENST00000623185 LIN9Q5TKA1 542 aa13.21□□□□□ -0.29
LINC00963-216ENST00000623185 TMC6Q7Z403 805 aa13.21□□□□□ -0.29
LINC00963-216ENST00000623185 DDX1Q92499 740 aaKnown RBP13.21□□□□□ -0.29
LINC00963-216ENST00000623185 PABPC5Q96DU9 382 aaKnown RBP13.21□□□□□ -0.29
LINC00963-216ENST00000623185 SMARCD1Q96GM5 515 aa13.21□□□□□ -0.29
LINC00963-216ENST00000623185 SPATA17Q96L03 361 aa13.21□□□□□ -0.29
LINC00963-216ENST00000623185 MED10Q9BTT4 135 aa13.21□□□□□ -0.29
LINC00963-216ENST00000623185 RHOBTB2Q9BYZ6 727 aa13.21□□□□□ -0.29
LINC00963-216ENST00000623185 CRISPLD1Q9H336 500 aa13.21□□□□□ -0.29
LINC00963-216ENST00000623185 FAM49BQ9NUQ9 324 aa13.21□□□□□ -0.29
LINC00963-216ENST00000623185 DZANK1Q9NVP4 752 aa13.21□□□□□ -0.29
LINC00963-216ENST00000623185 HESX1Q9UBX0 185 aa13.21□□□□□ -0.29
LINC00963-216ENST00000623185 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.21□□□□□ -0.29
LINC00963-216ENST00000623185 ASB3Q9Y575 518 aa13.21□□□□□ -0.29
LINC00963-216ENST00000623185 CHD7Q9P2D1 2997 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms