RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 USP17L7P0C7H9 530 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 HMGA1P17096 107 aaKnown RBP2.59□□□□□ -1.99
CPNE3-211ENST00000621526 TYMPP19971 482 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 SDSP20132 328 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 MX1P20591 662 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 ACP1P24666 158 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 GNA11P29992 359 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 NTSR1P30989 418 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 TIE1P35590 1138 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 GRIA4P48058 902 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 RXRGP48443 463 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 IFNAR2P48551 515 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 CD97P48960 835 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 CSNK1EP49674 416 aaKnown RBP2.59□□□□□ -1.99
CPNE3-211ENST00000621526 CCT8P50990 548 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 PDE6CP51160 858 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 ADCY7P51828 1080 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 NAPAP54920 295 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 NPEPPSP55786 919 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 OXCT1P55809 520 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 NLRP12P59046 1061 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 YWHAHQ04917 246 aaPredicted RBP2.59□□□□□ -1.99
CPNE3-211ENST00000621526 USP4Q13107 963 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 NMIQ13287 307 aaPredicted RBP2.59□□□□□ -1.99
CPNE3-211ENST00000621526 ORC1Q13415 861 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 MORC3Q14149 939 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 MTF1Q14872 753 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 E2F5Q15329 346 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 TEAD4Q15561 434 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 TAF12Q16514 161 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 UGCGQ16739 394 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 KIF19Q2TAC6 998 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 GAB4Q2WGN9 574 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 Q4G0T1 1027 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 C6orf132Q5T0Z8 1188 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 HES3Q5TGS1 186 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 LRCH2Q5VUJ6 765 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 WWC2Q6AWC2 1192 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 ARMCX5Q6P1M9 558 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 DHX32Q7L7V1 743 aaKnown RBP2.59□□□□□ -1.99
CPNE3-211ENST00000621526 HEATR3Q7Z4Q2 680 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 APBB1IPQ7Z5R6 666 aaPredicted RBP2.59□□□□□ -1.99
CPNE3-211ENST00000621526 TMEM150AQ86TG1 271 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 TTC30AQ86WT1 665 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 POTEDQ86YR6 584 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 EFCAB13Q8IY85 973 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 MAB21L3Q8N8X9 362 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 ZNF579Q8NAF0 562 aaKnown RBP2.59□□□□□ -1.99
CPNE3-211ENST00000621526 ATAD1Q8NBU5 361 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 C3orf58Q8NDZ4 430 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 NSUN7Q8NE18 718 aaKnown RBP2.59□□□□□ -1.99
CPNE3-211ENST00000621526 NCOA7Q8NI08 942 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 EXOC6Q8TAG9 804 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 PANK1Q8TE04 598 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 PIGOQ8TEQ8 1089 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 LRRC15Q8TF66 581 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 MRPS31Q92665 395 aaKnown RBP2.59□□□□□ -1.99
CPNE3-211ENST00000621526 SKA1Q96BD8 255 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 MOCOSQ96EN8 888 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 SGF29Q96ES7 293 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 POM121Q96HA1 1249 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 MYRFLQ96LU7 910 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 NACC1Q96RE7 527 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 CCNL2Q96S94 520 aaPredicted RBP2.59□□□□□ -1.99
CPNE3-211ENST00000621526 TSPAN18Q96SJ8 248 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 GABRG3Q99928 467 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 DUSP9Q99956 384 aaKnown RBP2.59□□□□□ -1.99
CPNE3-211ENST00000621526 SH2D3AQ9BRG2 576 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 ADPGKQ9BRR6 497 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 ARHGAP9Q9BRR9 750 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 C22orf23Q9BZE7 217 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 ZMYND12Q9H0C1 365 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 CRISPLD1Q9H336 500 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 KDM4CQ9H3R0 1056 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 UNC45AQ9H3U1 944 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 ZNF768Q9H5H4 540 aaKnown RBP2.59□□□□□ -1.99
CPNE3-211ENST00000621526 TTC12Q9H892 705 aaPredicted RBP2.59□□□□□ -1.99
CPNE3-211ENST00000621526 SENP2Q9HC62 589 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 C6orf50Q9HD87 102 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 TMPRSS4Q9NRS4 437 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 TOPORSQ9NS56 1045 aaPredicted RBP2.59□□□□□ -1.99
CPNE3-211ENST00000621526 CALCOCO1Q9P1Z2 691 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 CACNG4Q9UBN1 327 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 TUBD1Q9UJT1 453 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 ANAPC2Q9UJX6 822 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 PCDHB8Q9UN66 801 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 CCL26Q9Y258 94 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 ANKRD6Q9Y2G4 727 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 SLC27A5Q9Y2P5 690 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 NUB1Q9Y5A7 615 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 PCDHGA8Q9Y5G5 932 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 V9GY48 417 aaPredicted RBP2.59□□□□□ -1.99
CPNE3-211ENST00000621526 TICRRQ7Z2Z1 1910 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 PLXNB3Q9ULL4 1909 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 MYH4Q9Y623 1939 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 DOPEY2Q9Y3R5 2298 aa2.59□□□□□ -1.99
CPNE3-211ENST00000621526 ATXN2Q99700 1313 aaKnown RBP2.59□□□□□ -2
CPNE3-211ENST00000621526 OTOGQ6ZRI0 2925 aa2.58□□□□□ -2
CPNE3-211ENST00000621526 CELSR2Q9HCU4 2923 aa2.58□□□□□ -2
CPNE3-211ENST00000621526 NBPF19A0A087WUL8 3843 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms