RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 ABCB6Q9NP58 842 aa15.25■□□□□ 0.03
CBWD3-217ENST00000621474 DNMT3BQ9UBC3 853 aaKnown RBP15.25■□□□□ 0.03
CBWD3-217ENST00000621474 CLDN5O00501 218 aa15.25■□□□□ 0.03
CBWD3-217ENST00000621474 NTHL1P78549 312 aa15.25■□□□□ 0.03
CBWD3-217ENST00000621474 GCNT1Q02742 428 aa15.25■□□□□ 0.03
CBWD3-217ENST00000621474 EXOC3L4Q17RC7 722 aa15.25■□□□□ 0.03
CBWD3-217ENST00000621474 MGAT5BQ3V5L5 792 aa15.25■□□□□ 0.03
CBWD3-217ENST00000621474 ZNF394Q53GI3 561 aa15.25■□□□□ 0.03
CBWD3-217ENST00000621474 ATAT1Q5SQI0 421 aa15.25■□□□□ 0.03
CBWD3-217ENST00000621474 GJB7Q6PEY0 223 aa15.25■□□□□ 0.03
CBWD3-217ENST00000621474 CYP26C1Q6V0L0 522 aa15.25■□□□□ 0.03
CBWD3-217ENST00000621474 GBP6Q6ZN66 633 aa15.25■□□□□ 0.03
CBWD3-217ENST00000621474 GRASPQ7Z6J2 395 aaPredicted RBP15.25■□□□□ 0.03
CBWD3-217ENST00000621474 PPM1KQ8N3J5 372 aa15.25■□□□□ 0.03
CBWD3-217ENST00000621474 TNIP3Q96KP6 325 aa15.25■□□□□ 0.03
CBWD3-217ENST00000621474 SEPT5Q99719 369 aaPredicted RBP15.25■□□□□ 0.03
CBWD3-217ENST00000621474 NT5C1AQ9BXI3 368 aa15.25■□□□□ 0.03
CBWD3-217ENST00000621474 B3GNT5Q9BYG0 378 aa15.25■□□□□ 0.03
CBWD3-217ENST00000621474 VPS16Q9H269 839 aa15.25■□□□□ 0.03
CBWD3-217ENST00000621474 FAM124BQ9H5Z6 455 aaPredicted RBP15.25■□□□□ 0.03
CBWD3-217ENST00000621474 WDR6Q9NNW5 1121 aaKnown RBP15.25■□□□□ 0.03
CBWD3-217ENST00000621474 AJAP1Q9UKB5 411 aaPredicted RBP15.25■□□□□ 0.03
CBWD3-217ENST00000621474 TTC28Q96AY4 2481 aa15.24■□□□□ 0.03
CBWD3-217ENST00000621474 LRG1P02750 347 aa15.24■□□□□ 0.03
CBWD3-217ENST00000621474 BDNFP23560 247 aa15.24■□□□□ 0.03
CBWD3-217ENST00000621474 TBXAS1P24557 533 aaPredicted RBP15.24■□□□□ 0.03
CBWD3-217ENST00000621474 COPB1P53618 953 aaKnown RBP15.24■□□□□ 0.03
CBWD3-217ENST00000621474 RAD23BP54727 409 aa15.24■□□□□ 0.03
CBWD3-217ENST00000621474 CYP27A1Q02318 531 aa15.24■□□□□ 0.03
CBWD3-217ENST00000621474 MAPRE1Q15691 268 aaKnown RBP15.24■□□□□ 0.03
CBWD3-217ENST00000621474 TJAP1Q5JTD0 557 aa15.24■□□□□ 0.03
CBWD3-217ENST00000621474 SPATA2LQ8IUW3 424 aaPredicted RBP15.24■□□□□ 0.03
CBWD3-217ENST00000621474 FUKQ8N0W3 1084 aa15.24■□□□□ 0.03
CBWD3-217ENST00000621474 SLC4A11Q8NBS3 891 aa15.24■□□□□ 0.03
CBWD3-217ENST00000621474 STKLD1Q8NE28 680 aa15.24■□□□□ 0.03
CBWD3-217ENST00000621474 RIPOR3Q96MK2 946 aa15.24■□□□□ 0.03
CBWD3-217ENST00000621474 LRRC3Q9BY71 257 aa15.24■□□□□ 0.03
CBWD3-217ENST00000621474 ZNF518BQ9C0D4 1074 aa15.24■□□□□ 0.03
CBWD3-217ENST00000621474 SMTNL1A8MU46 457 aa15.23■□□□□ 0.03
CBWD3-217ENST00000621474 RNF225M0QZC1 329 aaPredicted RBP15.23■□□□□ 0.03
CBWD3-217ENST00000621474 CCDC130P13994 396 aa15.23■□□□□ 0.03
CBWD3-217ENST00000621474 MTHFRP42898 656 aa15.23■□□□□ 0.03
CBWD3-217ENST00000621474 TUFMP49411 452 aaKnown RBP15.23■□□□□ 0.03
CBWD3-217ENST00000621474 DDR2Q16832 855 aa15.23■□□□□ 0.03
CBWD3-217ENST00000621474 SLC5A9Q2M3M2 681 aa15.23■□□□□ 0.03
CBWD3-217ENST00000621474 SDHAF4Q5VUM1 108 aa15.23■□□□□ 0.03
CBWD3-217ENST00000621474 POTEHQ6S545 545 aa15.23■□□□□ 0.03
CBWD3-217ENST00000621474 LRSAM1Q6UWE0 723 aa15.23■□□□□ 0.03
CBWD3-217ENST00000621474 C4orf50Q6ZRC1 276 aa15.23■□□□□ 0.03
CBWD3-217ENST00000621474 TMC8Q8IU68 726 aa15.23■□□□□ 0.03
CBWD3-217ENST00000621474 GPR152Q8TDT2 470 aa15.23■□□□□ 0.03
CBWD3-217ENST00000621474 NECTIN4Q96NY8 510 aa15.23■□□□□ 0.03
CBWD3-217ENST00000621474 FAM49BQ9NUQ9 324 aa15.23■□□□□ 0.03
CBWD3-217ENST00000621474 APEX2Q9UBZ4 518 aa15.23■□□□□ 0.03
CBWD3-217ENST00000621474 CLUHO75153 1309 aa15.23■□□□□ 0.03
CBWD3-217ENST00000621474 ANAPC1Q9H1A4 1944 aa15.23■□□□□ 0.03
CBWD3-217ENST00000621474 XYLBO75191 536 aa15.22■□□□□ 0.03
CBWD3-217ENST00000621474 RHOP08100 348 aa15.22■□□□□ 0.03
CBWD3-217ENST00000621474 CCR2P41597 374 aa15.22■□□□□ 0.03
CBWD3-217ENST00000621474 MAGEA11P43364 429 aa15.22■□□□□ 0.03
CBWD3-217ENST00000621474 EPHA5P54756 1037 aa15.22■□□□□ 0.03
CBWD3-217ENST00000621474 ZP2Q05996 745 aa15.22■□□□□ 0.03
CBWD3-217ENST00000621474 FAM35AQ86V20 835 aa15.22■□□□□ 0.03
CBWD3-217ENST00000621474 HS6ST3Q8IZP7 471 aa15.22■□□□□ 0.03
CBWD3-217ENST00000621474 FAM200AQ8TCP9 573 aa15.22■□□□□ 0.03
CBWD3-217ENST00000621474 PSMG2Q969U7 264 aa15.22■□□□□ 0.03
CBWD3-217ENST00000621474 TMEM176AQ96HP8 235 aa15.22■□□□□ 0.03
CBWD3-217ENST00000621474 NECAB3Q96P71 396 aaPredicted RBP15.22■□□□□ 0.03
CBWD3-217ENST00000621474 PHF7Q9BWX1 381 aaPredicted RBP15.22■□□□□ 0.03
CBWD3-217ENST00000621474 PIDD1Q9HB75 910 aa15.22■□□□□ 0.03
CBWD3-217ENST00000621474 MYO10Q9HD67 2058 aa15.22■□□□□ 0.03
CBWD3-217ENST00000621474 LGALS16A8MUM7 142 aa15.21■□□□□ 0.03
CBWD3-217ENST00000621474 BEST1O76090 585 aa15.21■□□□□ 0.03
CBWD3-217ENST00000621474 CAVIN2O95810 425 aa15.21■□□□□ 0.03
CBWD3-217ENST00000621474 HMGA1P17096 107 aaKnown RBP15.21■□□□□ 0.03
CBWD3-217ENST00000621474 ALDH1A3P47895 512 aa15.21■□□□□ 0.03
CBWD3-217ENST00000621474 KLK7P49862 253 aa15.21■□□□□ 0.03
CBWD3-217ENST00000621474 PRSS36Q5K4E3 855 aa15.21■□□□□ 0.03
CBWD3-217ENST00000621474 PPP1R26Q5T8A7 1209 aaPredicted RBP15.21■□□□□ 0.03
CBWD3-217ENST00000621474 VSTM1Q6UX27 236 aa15.21■□□□□ 0.03
CBWD3-217ENST00000621474 ZMIZ2Q8NF64 920 aa15.21■□□□□ 0.03
CBWD3-217ENST00000621474 SLC2A14Q8TDB8 520 aa15.21■□□□□ 0.03
CBWD3-217ENST00000621474 ZNF334Q9HCZ1 680 aaPredicted RBP15.21■□□□□ 0.03
CBWD3-217ENST00000621474 UBE2TQ9NPD8 197 aaPredicted RBP15.21■□□□□ 0.03
CBWD3-217ENST00000621474 CNTN6Q9UQ52 1028 aa15.21■□□□□ 0.03
CBWD3-217ENST00000621474 SIK3Q9Y2K2 1263 aa15.21■□□□□ 0.03
CBWD3-217ENST00000621474 BECN2A8MW95 431 aa15.21■□□□□ 0.02
CBWD3-217ENST00000621474 PES1O00541 588 aaKnown RBP15.21■□□□□ 0.02
CBWD3-217ENST00000621474 MOSPD3O75425 235 aa15.21■□□□□ 0.02
CBWD3-217ENST00000621474 PTPN2P17706 415 aa15.21■□□□□ 0.02
CBWD3-217ENST00000621474 SP100P23497 879 aaPredicted RBP15.21■□□□□ 0.02
CBWD3-217ENST00000621474 ZNF132P52740 706 aa15.21■□□□□ 0.02
CBWD3-217ENST00000621474 ZNF445P59923 1031 aa15.21■□□□□ 0.02
CBWD3-217ENST00000621474 PLD1Q13393 1074 aa15.21■□□□□ 0.02
CBWD3-217ENST00000621474 MTMR3Q13615 1198 aa15.21■□□□□ 0.02
CBWD3-217ENST00000621474 PABPC1LQ4VXU2 614 aaKnown RBP15.21■□□□□ 0.02
CBWD3-217ENST00000621474 TMEM270Q6UE05 265 aa15.21■□□□□ 0.02
CBWD3-217ENST00000621474 DNAJB7Q7Z6W7 309 aaPredicted RBP15.21■□□□□ 0.02
CBWD3-217ENST00000621474 ADHFE1Q8IWW8 467 aa15.21■□□□□ 0.02
CBWD3-217ENST00000621474 TTC39CQ8N584 583 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms