RNA–Protein interactions for RNA: ENST00000621325.1

LIME1-210, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 2,410 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-210ENST00000621325 SPOCD1Q6ZMY3 1216 aa22.43■■□□□ 1.18
LIME1-210ENST00000621325 CCDC25Q86WR0 208 aa22.43■■□□□ 1.18
LIME1-210ENST00000621325 NT5DC4Q86YG4 428 aa22.43■■□□□ 1.18
LIME1-210ENST00000621325 UHMK1Q8TAS1 419 aaKnown RBP22.43■■□□□ 1.18
LIME1-210ENST00000621325 RBM41Q96IZ5 413 aaKnown RBP22.43■■□□□ 1.18
LIME1-210ENST00000621325 MRPL45Q9BRJ2 306 aaKnown RBP22.43■■□□□ 1.18
LIME1-210ENST00000621325 RABEP2Q9H5N1 569 aa22.43■■□□□ 1.18
LIME1-210ENST00000621325 GRIN2DO15399 1336 aa22.43■■□□□ 1.18
LIME1-210ENST00000621325 LRRD1A4D1F6 860 aa22.43■■□□□ 1.18
LIME1-210ENST00000621325 IL1R2P27930 398 aa22.43■■□□□ 1.18
LIME1-210ENST00000621325 IFFO1Q0D2I5 559 aa22.43■■□□□ 1.18
LIME1-210ENST00000621325 SLC29A2Q14542 456 aa22.43■■□□□ 1.18
LIME1-210ENST00000621325 NOTUMQ6P988 496 aa22.43■■□□□ 1.18
LIME1-210ENST00000621325 KDM7AQ6ZMT4 941 aa22.43■■□□□ 1.18
LIME1-210ENST00000621325 ZWILCHQ9H900 591 aa22.43■■□□□ 1.18
LIME1-210ENST00000621325 AAASQ9NRG9 546 aa22.43■■□□□ 1.18
LIME1-210ENST00000621325 NME7Q9Y5B8 376 aa22.43■■□□□ 1.18
LIME1-210ENST00000621325 SNX9Q9Y5X1 595 aa22.43■■□□□ 1.18
LIME1-210ENST00000621325 DNAH12Q6ZR08 3092 aa22.43■■□□□ 1.18
LIME1-210ENST00000621325 HAS3O00219 553 aa22.42■■□□□ 1.18
LIME1-210ENST00000621325 LRCH4O75427 683 aa22.42■■□□□ 1.18
LIME1-210ENST00000621325 STAU1O95793 577 aaKnown RBP22.42■■□□□ 1.18
LIME1-210ENST00000621325 GAS8O95995 478 aa22.42■■□□□ 1.18
LIME1-210ENST00000621325 KCNT1Q5JUK3 1230 aa22.42■■□□□ 1.18
LIME1-210ENST00000621325 SPDYCQ5MJ68 293 aa22.42■■□□□ 1.18
LIME1-210ENST00000621325 PLEKHA5Q9HAU0 1116 aa22.42■■□□□ 1.18
LIME1-210ENST00000621325 WHRNQ9P202 907 aa22.42■■□□□ 1.18
LIME1-210ENST00000621325 CCDC189A1A4V9 331 aa22.42■■□□□ 1.18
LIME1-210ENST00000621325 MANSC4A6NHS7 340 aaPredicted RBP22.42■■□□□ 1.18
LIME1-210ENST00000621325 RECQL4O94761 1208 aa22.42■■□□□ 1.18
LIME1-210ENST00000621325 HMGCRP04035 888 aa22.42■■□□□ 1.18
LIME1-210ENST00000621325 CHKAP35790 457 aa22.42■■□□□ 1.18
LIME1-210ENST00000621325 PSMC4P43686 418 aa22.42■■□□□ 1.18
LIME1-210ENST00000621325 SNX17Q15036 470 aa22.42■■□□□ 1.18
LIME1-210ENST00000621325 ZBTB6Q15916 424 aa22.42■■□□□ 1.18
LIME1-210ENST00000621325 SMYD5Q6GMV2 418 aa22.42■■□□□ 1.18
LIME1-210ENST00000621325 GRK7Q8WTQ7 553 aa22.42■■□□□ 1.18
LIME1-210ENST00000621325 TSPAN16Q9UKR8 245 aa22.42■■□□□ 1.18
LIME1-210ENST00000621325 ANKRD65E5RJM6 399 aa22.41■■□□□ 1.18
LIME1-210ENST00000621325 RPS6KA5O75582 802 aa22.41■■□□□ 1.18
LIME1-210ENST00000621325 SLC25A11Q02978 314 aaKnown RBP22.41■■□□□ 1.18
LIME1-210ENST00000621325 MYO1EQ12965 1108 aa22.41■■□□□ 1.18
LIME1-210ENST00000621325 DENND2CQ68D51 928 aa22.41■■□□□ 1.18
LIME1-210ENST00000621325 RHBDF2Q6PJF5 856 aa22.41■■□□□ 1.18
LIME1-210ENST00000621325 HAUS1Q96CS2 278 aa22.41■■□□□ 1.18
LIME1-210ENST00000621325 SNF8Q96H20 258 aa22.41■■□□□ 1.18
LIME1-210ENST00000621325 PIWIL1Q96J94 861 aaKnown RBP22.41■■□□□ 1.18
LIME1-210ENST00000621325 PWWP2AQ96N64 755 aa22.41■■□□□ 1.18
LIME1-210ENST00000621325 NT5C1AQ9BXI3 368 aa22.41■■□□□ 1.18
LIME1-210ENST00000621325 HOMER3Q9NSC5 361 aa22.41■■□□□ 1.18
LIME1-210ENST00000621325 KLK14Q9P0G3 267 aa22.41■■□□□ 1.18
LIME1-210ENST00000621325 DNPEPQ9ULA0 475 aa22.41■■□□□ 1.18
LIME1-210ENST00000621325 PIN4Q9Y237 131 aaKnown RBP22.41■■□□□ 1.18
LIME1-210ENST00000621325 NUDT17P0C025 328 aa22.41■■□□□ 1.18
LIME1-210ENST00000621325 ADCY8P40145 1251 aa22.41■■□□□ 1.18
LIME1-210ENST00000621325 CDKN2BP42772 138 aa22.41■■□□□ 1.18
LIME1-210ENST00000621325 ITGA8P53708 1063 aa22.41■■□□□ 1.18
LIME1-210ENST00000621325 GUCY1A3Q02108 690 aa22.41■■□□□ 1.18
LIME1-210ENST00000621325 SYDE1Q6ZW31 735 aaPredicted RBP22.41■■□□□ 1.18
LIME1-210ENST00000621325 GLIS1Q8NBF1 620 aa22.41■■□□□ 1.18
LIME1-210ENST00000621325 TRIM6Q9C030 488 aaPredicted RBP22.41■■□□□ 1.18
LIME1-210ENST00000621325 RNF39Q9H2S5 420 aa22.41■■□□□ 1.18
LIME1-210ENST00000621325 DNAJC17Q9NVM6 304 aaKnown RBP22.41■■□□□ 1.18
LIME1-210ENST00000621325 NOVA2Q9UNW9 492 aaKnown RBP22.41■■□□□ 1.18
LIME1-210ENST00000621325 hCG_1818297A0A087WSY0 165 aa22.4■■□□□ 1.18
LIME1-210ENST00000621325 HCRTO43612 131 aa22.4■■□□□ 1.18
LIME1-210ENST00000621325 PFKMP08237 780 aa22.4■■□□□ 1.18
LIME1-210ENST00000621325 CETN2P41208 172 aa22.4■■□□□ 1.18
LIME1-210ENST00000621325 YARSP54577 528 aaKnown RBP22.4■■□□□ 1.18
LIME1-210ENST00000621325 CDC42EP1Q00587 391 aa22.4■■□□□ 1.18
LIME1-210ENST00000621325 ZNF268Q14587 947 aaPredicted RBP22.4■■□□□ 1.18
LIME1-210ENST00000621325 ALKAL1Q6UXT8 129 aa22.4■■□□□ 1.18
LIME1-210ENST00000621325 ACOT1Q86TX2 421 aa22.4■■□□□ 1.18
LIME1-210ENST00000621325 IFNL1Q8IU54 200 aa22.4■■□□□ 1.18
LIME1-210ENST00000621325 MCRS1Q96EZ8 462 aa22.4■■□□□ 1.18
LIME1-210ENST00000621325 LPIN3Q9BQK8 851 aa22.4■■□□□ 1.18
LIME1-210ENST00000621325 C3orf70A6NLC5 250 aaPredicted RBP22.4■■□□□ 1.18
LIME1-210ENST00000621325 LIASO43766 372 aa22.4■■□□□ 1.18
LIME1-210ENST00000621325 RARGP13631 454 aa22.4■■□□□ 1.18
LIME1-210ENST00000621325 ATF2P15336 505 aa22.4■■□□□ 1.18
LIME1-210ENST00000621325 ITIH2P19823 946 aa22.4■■□□□ 1.18
LIME1-210ENST00000621325 CTGFP29279 349 aa22.4■■□□□ 1.18
LIME1-210ENST00000621325 GABRB2P47870 512 aa22.4■■□□□ 1.18
LIME1-210ENST00000621325 CPT1AP50416 773 aa22.4■■□□□ 1.18
LIME1-210ENST00000621325 ODF2Q5BJF6 829 aa22.4■■□□□ 1.18
LIME1-210ENST00000621325 EMC10Q5UCC4 262 aa22.4■■□□□ 1.18
LIME1-210ENST00000621325 LCLAT1Q6UWP7 414 aa22.4■■□□□ 1.18
LIME1-210ENST00000621325 RNF217Q8TC41 542 aa22.4■■□□□ 1.18
LIME1-210ENST00000621325 AP5M1Q9H0R1 490 aa22.4■■□□□ 1.18
LIME1-210ENST00000621325 WDR35Q9P2L0 1181 aa22.4■■□□□ 1.18
LIME1-210ENST00000621325 PCSK1NQ9UHG2 260 aa22.4■■□□□ 1.18
LIME1-210ENST00000621325 KIF1CO43896 1103 aaKnown RBP22.39■■□□□ 1.18
LIME1-210ENST00000621325 CAND2O75155 1236 aa22.39■■□□□ 1.18
LIME1-210ENST00000621325 TJP3O95049 919 aa22.39■■□□□ 1.18
LIME1-210ENST00000621325 FAM102AQ5T9C2 384 aaPredicted RBP22.39■■□□□ 1.18
LIME1-210ENST00000621325 SAPCD2Q86UD0 394 aa22.39■■□□□ 1.18
LIME1-210ENST00000621325 FNIP1Q8TF40 1166 aa22.39■■□□□ 1.18
LIME1-210ENST00000621325 FAM49BQ9NUQ9 324 aa22.39■■□□□ 1.18
LIME1-210ENST00000621325 DERAQ9Y315 318 aa22.39■■□□□ 1.18
LIME1-210ENST00000621325 MYADML2A6NDP7 307 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms