RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 C10orf88Q9H8K7 445 aa20.55■□□□□ 0.88
PDLIM3-212ENST00000620787 TMOD2Q9NZR1 351 aa20.55■□□□□ 0.88
PDLIM3-212ENST00000620787 DLGAP2Q9P1A6 1054 aa20.55■□□□□ 0.88
PDLIM3-212ENST00000620787 CNTNAP1P78357 1384 aa20.55■□□□□ 0.88
PDLIM3-212ENST00000620787 SMIM24O75264 130 aa20.54■□□□□ 0.88
PDLIM3-212ENST00000620787 RPS6P62753 249 aaKnown RBP20.54■□□□□ 0.88
PDLIM3-212ENST00000620787 OR52E8Q6IFG1 317 aa20.54■□□□□ 0.88
PDLIM3-212ENST00000620787 WDR60Q8WVS4 1066 aa20.54■□□□□ 0.88
PDLIM3-212ENST00000620787 FAM151AQ8WW52 585 aa20.54■□□□□ 0.88
PDLIM3-212ENST00000620787 DDX56Q9NY93 547 aaKnown RBP20.54■□□□□ 0.88
PDLIM3-212ENST00000620787 GABBR1Q9UBS5 961 aa20.54■□□□□ 0.88
PDLIM3-212ENST00000620787 MTO1Q9Y2Z2 717 aaKnown RBP20.54■□□□□ 0.88
PDLIM3-212ENST00000620787 SIP14410 1827 aa20.54■□□□□ 0.88
PDLIM3-212ENST00000620787 C3orf70A6NLC5 250 aaPredicted RBP20.54■□□□□ 0.88
PDLIM3-212ENST00000620787 CAPN9O14815 690 aa20.54■□□□□ 0.88
PDLIM3-212ENST00000620787 TBX10O75333 385 aa20.54■□□□□ 0.88
PDLIM3-212ENST00000620787 RFC5P40937 340 aa20.54■□□□□ 0.88
PDLIM3-212ENST00000620787 ZNF132P52740 706 aa20.54■□□□□ 0.88
PDLIM3-212ENST00000620787 RTP1P59025 263 aa20.54■□□□□ 0.88
PDLIM3-212ENST00000620787 SLC34A1Q06495 639 aa20.54■□□□□ 0.88
PDLIM3-212ENST00000620787 KRT72Q14CN4 511 aa20.54■□□□□ 0.88
PDLIM3-212ENST00000620787 PRKD1Q15139 912 aaPredicted RBP20.54■□□□□ 0.88
PDLIM3-212ENST00000620787 GNPTABQ3T906 1256 aa20.54■□□□□ 0.88
PDLIM3-212ENST00000620787 DNAJC24Q6P3W2 148 aa20.54■□□□□ 0.88
PDLIM3-212ENST00000620787 SLC30A9Q6PML9 568 aa20.54■□□□□ 0.88
PDLIM3-212ENST00000620787 LRRC74BQ6ZQY2 392 aa20.54■□□□□ 0.88
PDLIM3-212ENST00000620787 CHSY1Q86X52 802 aa20.54■□□□□ 0.88
PDLIM3-212ENST00000620787 HAPLN2Q9GZV7 340 aa20.54■□□□□ 0.88
PDLIM3-212ENST00000620787 TAS2R1Q9NYW7 299 aa20.54■□□□□ 0.88
PDLIM3-212ENST00000620787 SAE1Q9UBE0 346 aaPredicted RBP20.54■□□□□ 0.88
PDLIM3-212ENST00000620787 PCDHA10Q9Y5I2 948 aa20.54■□□□□ 0.88
PDLIM3-212ENST00000620787 EP400Q96L91 3159 aa20.54■□□□□ 0.88
PDLIM3-212ENST00000620787 TGDSO95455 350 aa20.53■□□□□ 0.88
PDLIM3-212ENST00000620787 CALB1P05937 261 aa20.53■□□□□ 0.88
PDLIM3-212ENST00000620787 DLDP09622 509 aaKnown RBP20.53■□□□□ 0.88
PDLIM3-212ENST00000620787 GNAT1P11488 350 aa20.53■□□□□ 0.88
PDLIM3-212ENST00000620787 TBXAS1P24557 533 aaPredicted RBP20.53■□□□□ 0.88
PDLIM3-212ENST00000620787 ETV4P43268 484 aa20.53■□□□□ 0.88
PDLIM3-212ENST00000620787 NEK3P51956 506 aa20.53■□□□□ 0.88
PDLIM3-212ENST00000620787 PPP1R15BQ5SWA1 713 aa20.53■□□□□ 0.88
PDLIM3-212ENST00000620787 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.53■□□□□ 0.88
PDLIM3-212ENST00000620787 RDM1Q8NG50 284 aa20.53■□□□□ 0.88
PDLIM3-212ENST00000620787 IFT43Q96FT9 208 aa20.53■□□□□ 0.88
PDLIM3-212ENST00000620787 PDCD2LQ9BRP1 358 aa20.53■□□□□ 0.88
PDLIM3-212ENST00000620787 MMADHCQ9H3L0 296 aaPredicted RBP20.53■□□□□ 0.88
PDLIM3-212ENST00000620787 RAVER2Q9HCJ3 691 aaKnown RBP20.53■□□□□ 0.88
PDLIM3-212ENST00000620787 AGO2Q9UKV8 859 aaKnown RBP20.53■□□□□ 0.88
PDLIM3-212ENST00000620787 TCRBV7S3A2A0A539 114 aa20.53■□□□□ 0.88
PDLIM3-212ENST00000620787 TESPA1A2RU30 521 aaPredicted RBP20.53■□□□□ 0.88
PDLIM3-212ENST00000620787 SPDYE2BA6NHP3 402 aa20.53■□□□□ 0.88
PDLIM3-212ENST00000620787 SPDYE6P0CI01 402 aa20.53■□□□□ 0.88
PDLIM3-212ENST00000620787 SARNPP82979 210 aaKnown RBP20.53■□□□□ 0.88
PDLIM3-212ENST00000620787 OTUD4Q01804 1114 aaKnown RBP20.53■□□□□ 0.88
PDLIM3-212ENST00000620787 RCN2Q14257 317 aa20.53■□□□□ 0.88
PDLIM3-212ENST00000620787 SPDYE2Q495Y8 402 aa20.53■□□□□ 0.88
PDLIM3-212ENST00000620787 MCPH1Q8NEM0 835 aa20.53■□□□□ 0.88
PDLIM3-212ENST00000620787 ACTL9Q8TC94 416 aa20.53■□□□□ 0.88
PDLIM3-212ENST00000620787 MCUR1Q96AQ8 359 aa20.53■□□□□ 0.88
PDLIM3-212ENST00000620787 POLR3FQ9H1D9 316 aaPredicted RBP20.53■□□□□ 0.88
PDLIM3-212ENST00000620787 SYNCQ9H7C4 482 aa20.53■□□□□ 0.88
PDLIM3-212ENST00000620787 PIDD1Q9HB75 910 aa20.53■□□□□ 0.88
PDLIM3-212ENST00000620787 METTL5Q9NRN9 209 aaKnown RBP20.53■□□□□ 0.88
PDLIM3-212ENST00000620787 ZNF219Q9P2Y4 722 aaPredicted RBP20.53■□□□□ 0.88
PDLIM3-212ENST00000620787 STYXL1Q9Y6J8 313 aa20.53■□□□□ 0.88
PDLIM3-212ENST00000620787 LPXNO60711 386 aa20.52■□□□□ 0.88
PDLIM3-212ENST00000620787 TMEM63AO94886 807 aa20.52■□□□□ 0.88
PDLIM3-212ENST00000620787 RPL22P35268 128 aaKnown RBP20.52■□□□□ 0.88
PDLIM3-212ENST00000620787 ZBTB16Q05516 673 aa20.52■□□□□ 0.88
PDLIM3-212ENST00000620787 MTM1Q13496 603 aa20.52■□□□□ 0.88
PDLIM3-212ENST00000620787 SCARA3Q6AZY7 606 aa20.52■□□□□ 0.88
PDLIM3-212ENST00000620787 CIAPIN1Q6FI81 312 aa20.52■□□□□ 0.88
PDLIM3-212ENST00000620787 DCUN1D2Q6PH85 259 aa20.52■□□□□ 0.88
PDLIM3-212ENST00000620787 TTC7BQ86TV6 843 aa20.52■□□□□ 0.88
PDLIM3-212ENST00000620787 VPS52Q8N1B4 723 aa20.52■□□□□ 0.88
PDLIM3-212ENST00000620787 UBR7Q8N806 425 aa20.52■□□□□ 0.88
PDLIM3-212ENST00000620787 LBHD1Q9BQE6 289 aaPredicted RBP20.52■□□□□ 0.88
PDLIM3-212ENST00000620787 VCXQ9H320 206 aa20.52■□□□□ 0.88
PDLIM3-212ENST00000620787 PAPOLBQ9NRJ5 636 aaKnown RBP20.52■□□□□ 0.88
PDLIM3-212ENST00000620787 STX18Q9P2W9 335 aaKnown RBP20.52■□□□□ 0.88
PDLIM3-212ENST00000620787 ZNF70Q9UC06 446 aaPredicted RBP20.52■□□□□ 0.88
PDLIM3-212ENST00000620787 C2orf71A6NGG8 1288 aa20.52■□□□□ 0.88
PDLIM3-212ENST00000620787 DGAT1O75907 488 aa20.52■□□□□ 0.88
PDLIM3-212ENST00000620787 SKIP12755 728 aa20.52■□□□□ 0.88
PDLIM3-212ENST00000620787 PAPOLAP51003 745 aaKnown RBP20.52■□□□□ 0.88
PDLIM3-212ENST00000620787 DYNLT1P63172 113 aa20.52■□□□□ 0.88
PDLIM3-212ENST00000620787 PIGHQ14442 188 aaPredicted RBP20.52■□□□□ 0.88
PDLIM3-212ENST00000620787 ZBTB41Q5SVQ8 909 aa20.52■□□□□ 0.88
PDLIM3-212ENST00000620787 PALM2Q8IXS6 379 aa20.52■□□□□ 0.88
PDLIM3-212ENST00000620787 SERAC1Q96JX3 654 aa20.52■□□□□ 0.88
PDLIM3-212ENST00000620787 RMDN3Q96TC7 470 aa20.52■□□□□ 0.88
PDLIM3-212ENST00000620787 PXMP2Q9NR77 195 aa20.52■□□□□ 0.88
PDLIM3-212ENST00000620787 ARHGEF4Q9NR80 690 aa20.52■□□□□ 0.88
PDLIM3-212ENST00000620787 RBAKQ9NYW8 714 aaPredicted RBP20.52■□□□□ 0.88
PDLIM3-212ENST00000620787 MT-ND3P03897 115 aa20.51■□□□□ 0.87
PDLIM3-212ENST00000620787 RARBP10826 455 aa20.51■□□□□ 0.87
PDLIM3-212ENST00000620787 BGNP21810 368 aa20.51■□□□□ 0.87
PDLIM3-212ENST00000620787 AP1B1Q10567 949 aa20.51■□□□□ 0.87
PDLIM3-212ENST00000620787 DLGAP5Q15398 846 aa20.51■□□□□ 0.87
PDLIM3-212ENST00000620787 BBS9Q3SYG4 887 aa20.51■□□□□ 0.87
PDLIM3-212ENST00000620787 RNF220Q5VTB9 566 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms