RNA–Protein interactions for RNA: ENST00000619396.4

KHSRP-213, Transcript of KH-type splicing regulatory protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KHSRP, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-213ENST00000619396 PAIP2Q9BPZ3 127 aaKnown RBP31.6■■■□□ 2.65
KHSRP-213ENST00000619396 TMEM121Q9BTD3 319 aa31.6■■■□□ 2.65
KHSRP-213ENST00000619396 MRPL4Q9BYD3 311 aaKnown RBP31.6■■■□□ 2.65
KHSRP-213ENST00000619396 C3orf70A6NLC5 250 aaPredicted RBP31.59■■■□□ 2.65
KHSRP-213ENST00000619396 LGR5O75473 907 aa31.59■■■□□ 2.65
KHSRP-213ENST00000619396 SKIV2L2P42285 1042 aaKnown RBP31.59■■■□□ 2.65
KHSRP-213ENST00000619396 C9orf131Q5VYM1 1079 aa31.59■■■□□ 2.65
KHSRP-213ENST00000619396 TLDC1Q6P9B6 456 aa31.59■■■□□ 2.65
KHSRP-213ENST00000619396 GPATCH11Q8N954 259 aa31.59■■■□□ 2.65
KHSRP-213ENST00000619396 TFAP2BQ92481 460 aa31.59■■■□□ 2.65
KHSRP-213ENST00000619396 SENP1Q9P0U3 644 aa31.59■■■□□ 2.65
KHSRP-213ENST00000619396 GRID1Q9ULK0 1009 aa31.59■■■□□ 2.65
KHSRP-213ENST00000619396 PCDHGC3Q9UN70 934 aa31.59■■■□□ 2.65
KHSRP-213ENST00000619396 TRIM33Q9UPN9 1127 aa31.59■■■□□ 2.65
KHSRP-213ENST00000619396 SMG5Q9UPR3 1016 aaKnown RBP31.59■■■□□ 2.65
KHSRP-213ENST00000619396 LRRD1A4D1F6 860 aa31.59■■■□□ 2.65
KHSRP-213ENST00000619396 TOM1L1O75674 476 aa31.59■■■□□ 2.65
KHSRP-213ENST00000619396 YBX3P16989 372 aaKnown RBP eCLIP31.59■■■□□ 2.655e-9■□□□□ 9.4
KHSRP-213ENST00000619396 IBSPP21815 317 aaPredicted RBP31.59■■■□□ 2.65
KHSRP-213ENST00000619396 OSTNP61366 133 aa31.59■■■□□ 2.65
KHSRP-213ENST00000619396 PDE4CQ08493 712 aa31.59■■■□□ 2.65
KHSRP-213ENST00000619396 GJC2Q5T442 439 aaPredicted RBP31.59■■■□□ 2.65
KHSRP-213ENST00000619396 CDCA2Q69YH5 1023 aaPredicted RBP31.59■■■□□ 2.65
KHSRP-213ENST00000619396 ZBED8Q8IZ13 594 aa31.59■■■□□ 2.65
KHSRP-213ENST00000619396 TMEM130Q8N3G9 435 aa31.59■■■□□ 2.65
KHSRP-213ENST00000619396 AGAP11Q8TF27 550 aa31.59■■■□□ 2.65
KHSRP-213ENST00000619396 FAM167AQ96KS9 214 aa31.59■■■□□ 2.65
KHSRP-213ENST00000619396 NIF3L1Q9GZT8 377 aa31.59■■■□□ 2.65
KHSRP-213ENST00000619396 CXorf56Q9H5V9 222 aa31.59■■■□□ 2.65
KHSRP-213ENST00000619396 VPS37BQ9H9H4 285 aa31.59■■■□□ 2.65
KHSRP-213ENST00000619396 EBF2Q9HAK2 575 aa31.59■■■□□ 2.65
KHSRP-213ENST00000619396 EVPLQ92817 2033 aa31.58■■■□□ 2.65
KHSRP-213ENST00000619396 ABLIM1O14639 778 aa31.58■■■□□ 2.65
KHSRP-213ENST00000619396 B4GALT5O43286 388 aa31.58■■■□□ 2.65
KHSRP-213ENST00000619396 EIF4BP23588 611 aaKnown RBP31.58■■■□□ 2.65
KHSRP-213ENST00000619396 GJA5P36382 358 aa31.58■■■□□ 2.65
KHSRP-213ENST00000619396 PPIL2Q13356 520 aa31.58■■■□□ 2.65
KHSRP-213ENST00000619396 SPARCL1Q14515 664 aa31.58■■■□□ 2.65
KHSRP-213ENST00000619396 ZNF394Q53GI3 561 aa31.58■■■□□ 2.65
KHSRP-213ENST00000619396 CCDC62Q6P9F0 684 aa31.58■■■□□ 2.65
KHSRP-213ENST00000619396 CENPUQ71F23 418 aa31.58■■■□□ 2.65
KHSRP-213ENST00000619396 GIMAP7Q8NHV1 300 aa31.58■■■□□ 2.65
KHSRP-213ENST00000619396 NLRP4Q96MN2 994 aa31.58■■■□□ 2.65
KHSRP-213ENST00000619396 MGAMO43451 1857 aa31.57■■■□□ 2.65
KHSRP-213ENST00000619396 SPOCK2Q92563 424 aa31.57■■■□□ 2.65
KHSRP-213ENST00000619396 SLC24A2Q9UI40 661 aa31.57■■■□□ 2.65
KHSRP-213ENST00000619396 FARP1Q9Y4F1 1045 aaPredicted RBP31.57■■■□□ 2.65
KHSRP-213ENST00000619396 CYP2C8P10632 490 aa31.57■■■□□ 2.64
KHSRP-213ENST00000619396 EFNA5P52803 228 aa31.57■■■□□ 2.64
KHSRP-213ENST00000619396 PDIA2Q13087 525 aaKnown RBP31.57■■■□□ 2.64
KHSRP-213ENST00000619396 DNAJC3Q13217 504 aa31.57■■■□□ 2.64
KHSRP-213ENST00000619396 ACCSLQ4AC99 568 aa31.57■■■□□ 2.64
KHSRP-213ENST00000619396 ERICH1Q86X53 443 aa31.57■■■□□ 2.64
KHSRP-213ENST00000619396 CEP120Q8N960 986 aa31.57■■■□□ 2.64
KHSRP-213ENST00000619396 L3MBTL3Q96JM7 780 aaPredicted RBP31.57■■■□□ 2.64
KHSRP-213ENST00000619396 PPCSQ9HAB8 311 aa31.57■■■□□ 2.64
KHSRP-213ENST00000619396 PHTF1Q9UMS5 762 aa31.57■■■□□ 2.64
KHSRP-213ENST00000619396 IGKV6-21A0A0C4DH24 114 aa31.56■■■□□ 2.64
KHSRP-213ENST00000619396 A0A1B0GUA9 196 aa31.56■■■□□ 2.64
KHSRP-213ENST00000619396 TXNP10599 105 aaKnown RBP31.56■■■□□ 2.64
KHSRP-213ENST00000619396 KRT15P19012 456 aa31.56■■■□□ 2.64
KHSRP-213ENST00000619396 RPA3P35244 121 aaPredicted RBP31.56■■■□□ 2.64
KHSRP-213ENST00000619396 CLCN3P51790 818 aa31.56■■■□□ 2.64
KHSRP-213ENST00000619396 GPX6P59796 221 aa31.56■■■□□ 2.64
KHSRP-213ENST00000619396 SGSM1Q2NKQ1 1148 aa31.56■■■□□ 2.64
KHSRP-213ENST00000619396 CYP4A22Q5TCH4 519 aa31.56■■■□□ 2.64
KHSRP-213ENST00000619396 STAMBPL1Q96FJ0 436 aa31.56■■■□□ 2.64
KHSRP-213ENST00000619396 SMC6Q96SB8 1091 aa31.56■■■□□ 2.64
KHSRP-213ENST00000619396 SGK1O00141 431 aa31.56■■■□□ 2.64
KHSRP-213ENST00000619396 NDC80O14777 642 aa31.56■■■□□ 2.64
KHSRP-213ENST00000619396 TYROBPO43914 113 aa31.56■■■□□ 2.64
KHSRP-213ENST00000619396 UNC5CO95185 931 aa31.56■■■□□ 2.64
KHSRP-213ENST00000619396 PDK4Q16654 411 aa31.56■■■□□ 2.64
KHSRP-213ENST00000619396 MAPK6Q16659 721 aa31.56■■■□□ 2.64
KHSRP-213ENST00000619396 CAPN12Q6ZSI9 719 aa31.56■■■□□ 2.64
KHSRP-213ENST00000619396 POLNQ7Z5Q5 900 aa31.56■■■□□ 2.64
KHSRP-213ENST00000619396 THNSL1Q8IYQ7 743 aa31.56■■■□□ 2.64
KHSRP-213ENST00000619396 C4orf33Q8N1A6 199 aa31.56■■■□□ 2.64
KHSRP-213ENST00000619396 L3MBTL1Q9Y468 752 aa31.56■■■□□ 2.64
KHSRP-213ENST00000619396 ELF1P32519 619 aa31.55■■■□□ 2.64
KHSRP-213ENST00000619396 SLC1A5Q15758 541 aa31.55■■■□□ 2.64
KHSRP-213ENST00000619396 EFR3BQ9Y2G0 817 aa31.55■■■□□ 2.64
KHSRP-213ENST00000619396 A0A1W2PPM1 405 aa31.55■■■□□ 2.64
KHSRP-213ENST00000619396 HGSO14964 777 aaPredicted RBP31.55■■■□□ 2.64
KHSRP-213ENST00000619396 WEE2P0C1S8 567 aa31.55■■■□□ 2.64
KHSRP-213ENST00000619396 MSH2P43246 934 aa31.55■■■□□ 2.64
KHSRP-213ENST00000619396 YARSP54577 528 aaKnown RBP31.55■■■□□ 2.64
KHSRP-213ENST00000619396 PLCB3Q01970 1234 aa31.55■■■□□ 2.64
KHSRP-213ENST00000619396 EFHC2Q5JST6 749 aa31.55■■■□□ 2.64
KHSRP-213ENST00000619396 PLPPR4Q7Z2D5 763 aa31.55■■■□□ 2.64
KHSRP-213ENST00000619396 ARFGAP1Q8N6T3 406 aa31.55■■■□□ 2.64
KHSRP-213ENST00000619396 MINDY3Q9H8M7 445 aa31.55■■■□□ 2.64
KHSRP-213ENST00000619396 CLUHO75153 1309 aa31.54■■■□□ 2.64
KHSRP-213ENST00000619396 A8MUI8 341 aa31.54■■■□□ 2.64
KHSRP-213ENST00000619396 OGTO15294 1046 aa31.54■■■□□ 2.64
KHSRP-213ENST00000619396 CSDE1O75534 798 aaKnown RBP31.54■■■□□ 2.64
KHSRP-213ENST00000619396 IFNB1P01574 187 aa31.54■■■□□ 2.64
KHSRP-213ENST00000619396 SLC25A11Q02978 314 aaKnown RBP31.54■■■□□ 2.64
KHSRP-213ENST00000619396 MXD4Q14582 209 aaPredicted RBP31.54■■■□□ 2.64
KHSRP-213ENST00000619396 DUOXA2Q1HG44 320 aa31.54■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms