RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 MIER3Q7Z3K6 550 aa8.36□□□□□ -1.07
CBWD1-228ENST00000619157 FBXO18Q8NFZ0 1043 aa8.36□□□□□ -1.07
CBWD1-228ENST00000619157 PHOSPHO2Q8TCD6 241 aa8.36□□□□□ -1.07
CBWD1-228ENST00000619157 MTMR9Q96QG7 549 aa8.36□□□□□ -1.07
CBWD1-228ENST00000619157 MTIF3Q9H2K0 278 aaKnown RBP8.36□□□□□ -1.07
CBWD1-228ENST00000619157 PRDM12Q9H4Q4 367 aa8.36□□□□□ -1.07
CBWD1-228ENST00000619157 WDR81Q562E7 1941 aa8.36□□□□□ -1.07
CBWD1-228ENST00000619157 MICAL3Q7RTP6 2002 aa8.36□□□□□ -1.07
CBWD1-228ENST00000619157 KDM3AQ9Y4C1 1321 aa8.35□□□□□ -1.07
CBWD1-228ENST00000619157 ABHD14A-ACY1A0A1B0GW23 586 aa8.35□□□□□ -1.07
CBWD1-228ENST00000619157 TBX3O15119 743 aa8.35□□□□□ -1.07
CBWD1-228ENST00000619157 GPR32O75388 356 aa8.35□□□□□ -1.07
CBWD1-228ENST00000619157 VTNP04004 478 aa8.35□□□□□ -1.07
CBWD1-228ENST00000619157 LINC00271P0C7V0 271 aa8.35□□□□□ -1.07
CBWD1-228ENST00000619157 SFNP31947 248 aa8.35□□□□□ -1.07
CBWD1-228ENST00000619157 TOB1P50616 345 aaPredicted RBP8.35□□□□□ -1.07
CBWD1-228ENST00000619157 CLCN3P51790 818 aa8.35□□□□□ -1.07
CBWD1-228ENST00000619157 TAP1Q03518 808 aa8.35□□□□□ -1.07
CBWD1-228ENST00000619157 TMEM266Q2M3C6 531 aa8.35□□□□□ -1.07
CBWD1-228ENST00000619157 PLA2G4FQ68DD2 849 aa8.35□□□□□ -1.07
CBWD1-228ENST00000619157 LRRC71Q8N4P6 559 aa8.35□□□□□ -1.07
CBWD1-228ENST00000619157 C4orf32Q8N8J7 132 aa8.35□□□□□ -1.07
CBWD1-228ENST00000619157 USP38Q8NB14 1042 aa8.35□□□□□ -1.07
CBWD1-228ENST00000619157 RDM1Q8NG50 284 aa8.35□□□□□ -1.07
CBWD1-228ENST00000619157 ALG3Q92685 438 aa8.35□□□□□ -1.07
CBWD1-228ENST00000619157 C8orf76Q96K31 380 aa8.35□□□□□ -1.07
CBWD1-228ENST00000619157 FAM20AQ96MK3 541 aa8.35□□□□□ -1.07
CBWD1-228ENST00000619157 IFIH1Q9BYX4 1025 aaKnown RBP8.35□□□□□ -1.07
CBWD1-228ENST00000619157 CELF4Q9BZC1 486 aaKnown RBP8.35□□□□□ -1.07
CBWD1-228ENST00000619157 RNF38Q9H0F5 515 aa8.35□□□□□ -1.07
CBWD1-228ENST00000619157 TMX1Q9H3N1 280 aa8.35□□□□□ -1.07
CBWD1-228ENST00000619157 CERS4Q9HA82 394 aa8.35□□□□□ -1.07
CBWD1-228ENST00000619157 RGL1Q9NZL6 768 aa8.35□□□□□ -1.07
CBWD1-228ENST00000619157 NOC2LQ9Y3T9 749 aaKnown RBP8.35□□□□□ -1.07
CBWD1-228ENST00000619157 TRPV2Q9Y5S1 764 aa8.35□□□□□ -1.07
CBWD1-228ENST00000619157 IGKV6-21A0A0C4DH24 114 aa8.34□□□□□ -1.07
CBWD1-228ENST00000619157 LINC01553A4QN01 128 aa8.34□□□□□ -1.07
CBWD1-228ENST00000619157 ENPP3O14638 875 aa8.34□□□□□ -1.07
CBWD1-228ENST00000619157 TNFRSF10CO14798 259 aa8.34□□□□□ -1.07
CBWD1-228ENST00000619157 FGF10O15520 208 aaPredicted RBP8.34□□□□□ -1.07
CBWD1-228ENST00000619157 SUV39H1O43463 412 aa8.34□□□□□ -1.07
CBWD1-228ENST00000619157 MGEA5O60502 916 aa8.34□□□□□ -1.07
CBWD1-228ENST00000619157 LPXNO60711 386 aa8.34□□□□□ -1.07
CBWD1-228ENST00000619157 ITGB3P05106 788 aa8.34□□□□□ -1.07
CBWD1-228ENST00000619157 NCAM1P13591 858 aa8.34□□□□□ -1.07
CBWD1-228ENST00000619157 U2AF2P26368 475 aaKnown RBP eCLIP8.34□□□□□ -1.07
CBWD1-228ENST00000619157 KCNJ6P48051 423 aa8.34□□□□□ -1.07
CBWD1-228ENST00000619157 NPEPPSP55786 919 aa8.34□□□□□ -1.07
CBWD1-228ENST00000619157 HMGN5P82970 282 aaKnown RBP8.34□□□□□ -1.07
CBWD1-228ENST00000619157 HTRA4P83105 476 aaPredicted RBP8.34□□□□□ -1.07
CBWD1-228ENST00000619157 KIZQ2M2Z5 673 aa8.34□□□□□ -1.07
CBWD1-228ENST00000619157 TSHZ1Q6ZSZ6 1077 aa8.34□□□□□ -1.07
CBWD1-228ENST00000619157 FAM228AQ86W67 206 aa8.34□□□□□ -1.07
CBWD1-228ENST00000619157 CKAP2LQ8IYA6 745 aa8.34□□□□□ -1.07
CBWD1-228ENST00000619157 MYOCDQ8IZQ8 938 aa8.34□□□□□ -1.07
CBWD1-228ENST00000619157 SEPT8Q92599 483 aa8.34□□□□□ -1.07
CBWD1-228ENST00000619157 TOP1MTQ969P6 601 aa8.34□□□□□ -1.07
CBWD1-228ENST00000619157 DYDC2Q96IM9 177 aa8.34□□□□□ -1.07
CBWD1-228ENST00000619157 ZNF668Q96K58 619 aaPredicted RBP8.34□□□□□ -1.07
CBWD1-228ENST00000619157 PRR13Q9NZ81 148 aa8.34□□□□□ -1.07
CBWD1-228ENST00000619157 MSRAQ9UJ68 235 aa8.34□□□□□ -1.07
CBWD1-228ENST00000619157 PADI3Q9ULW8 664 aa8.34□□□□□ -1.07
CBWD1-228ENST00000619157 A0A087WWV3 80 aa8.33□□□□□ -1.08
CBWD1-228ENST00000619157 SLITRK3O94933 977 aa8.33□□□□□ -1.08
CBWD1-228ENST00000619157 FSHBP01225 129 aa8.33□□□□□ -1.08
CBWD1-228ENST00000619157 ATP2B1P20020 1258 aa8.33□□□□□ -1.08
CBWD1-228ENST00000619157 GJB2P29033 226 aa8.33□□□□□ -1.08
CBWD1-228ENST00000619157 PMLP29590 882 aa8.33□□□□□ -1.08
CBWD1-228ENST00000619157 MCM7P33993 719 aa8.33□□□□□ -1.08
CBWD1-228ENST00000619157 PSMC5P62195 406 aa8.33□□□□□ -1.08
CBWD1-228ENST00000619157 CUL4AQ13619 759 aa8.33□□□□□ -1.08
CBWD1-228ENST00000619157 CTTNQ14247 550 aaKnown RBP8.33□□□□□ -1.08
CBWD1-228ENST00000619157 EPHA7Q15375 998 aa8.33□□□□□ -1.08
CBWD1-228ENST00000619157 ZNF174Q15697 407 aa8.33□□□□□ -1.08
CBWD1-228ENST00000619157 CALCRLQ16602 461 aa8.33□□□□□ -1.08
CBWD1-228ENST00000619157 MTERF2Q49AM1 385 aa8.33□□□□□ -1.08
CBWD1-228ENST00000619157 XKR3Q5GH77 459 aa8.33□□□□□ -1.08
CBWD1-228ENST00000619157 NCAPH2Q6IBW4 605 aa8.33□□□□□ -1.08
CBWD1-228ENST00000619157 EFCAB12Q6NXP0 572 aa8.33□□□□□ -1.08
CBWD1-228ENST00000619157 CYP2R1Q6VVX0 501 aa8.33□□□□□ -1.08
CBWD1-228ENST00000619157 RSPH3Q86UC2 560 aa8.33□□□□□ -1.08
CBWD1-228ENST00000619157 NOSTRINQ8IVI9 506 aa8.33□□□□□ -1.08
CBWD1-228ENST00000619157 NME8Q8N427 588 aa8.33□□□□□ -1.08
CBWD1-228ENST00000619157 FAM167AQ96KS9 214 aa8.33□□□□□ -1.08
CBWD1-228ENST00000619157 NOX5Q96PH1 765 aa8.33□□□□□ -1.08
CBWD1-228ENST00000619157 HSD17B14Q9BPX1 270 aa8.33□□□□□ -1.08
CBWD1-228ENST00000619157 LXNQ9BS40 222 aa8.33□□□□□ -1.08
CBWD1-228ENST00000619157 FOXP1Q9H334 677 aaPredicted RBP8.33□□□□□ -1.08
CBWD1-228ENST00000619157 SLC28A3Q9HAS3 691 aa8.33□□□□□ -1.08
CBWD1-228ENST00000619157 ERVK-5Q9HDB9 667 aa8.33□□□□□ -1.08
CBWD1-228ENST00000619157 SUCOQ9UBS9 1254 aaKnown RBP8.33□□□□□ -1.08
CBWD1-228ENST00000619157 SQORQ9Y6N5 450 aa8.33□□□□□ -1.08
CBWD1-228ENST00000619157 COL4A4P53420 1690 aaPredicted RBP8.33□□□□□ -1.08
CBWD1-228ENST00000619157 KAT6AQ92794 2004 aa8.32□□□□□ -1.08
CBWD1-228ENST00000619157 NEMFO60524 1076 aa8.32□□□□□ -1.08
CBWD1-228ENST00000619157 EFCAB14O75071 495 aa8.32□□□□□ -1.08
CBWD1-228ENST00000619157 MAFO75444 373 aaPredicted RBP8.32□□□□□ -1.08
CBWD1-228ENST00000619157 CSDE1O75534 798 aaKnown RBP8.32□□□□□ -1.08
CBWD1-228ENST00000619157 AMHP03971 560 aa8.32□□□□□ -1.08
CBWD1-228ENST00000619157 FOSL2P15408 326 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms