RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 C19orf48Q6RUI8 117 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 NOSTRINQ8IVI9 506 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 OVCA2Q8WZ82 227 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 PIGKQ92643 395 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 RABGGTAQ92696 567 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 GJA10Q969M2 543 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 GABRG3Q99928 467 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 TTLL2Q9BWV7 592 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 SLC26A6Q9BXS9 759 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 CLMPQ9H6B4 373 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 DUS2Q9NX74 493 aaKnown RBP4.97□□□□□ -1.61
SNCA-213ENST00000618500 KCND2Q9NZV8 630 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 IGHV1OR15-9A0A0B4J2B8 117 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 OTOL1A6NHN0 477 aaPredicted RBP4.97□□□□□ -1.61
SNCA-213ENST00000618500 C10orf142B7Z368 130 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 PIRO00625 290 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 DCLK1O15075 740 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 ARHGAP6O43182 974 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 FAM189A1O60320 539 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 PCDHGA12O60330 932 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 CLTAP09496 248 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 FAM163BP0C2L3 166 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 XBP1P17861 261 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 HSPA4P34932 840 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 GRIA2P42262 883 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 RPL10AP62906 217 aaKnown RBP4.97□□□□□ -1.61
SNCA-213ENST00000618500 INF2Q27J81 1249 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 BMP2KLQ5H9B9 411 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 WDR45BQ5MNZ6 344 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 SPATA1Q5VX52 437 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 OVOS1Q6IE37 1185 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 CC2D1AQ6P1N0 951 aaPredicted RBP4.97□□□□□ -1.61
SNCA-213ENST00000618500 Q6ZUG5 572 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 RAB11FIP4Q86YS3 637 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 LURAP1LQ8IV03 231 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 DCP1BQ8IZD4 617 aaKnown RBP4.97□□□□□ -1.61
SNCA-213ENST00000618500 ERMNQ8TAM6 284 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 WASF1Q92558 559 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 BAP1Q92560 729 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 MRPS31Q92665 395 aaKnown RBP4.97□□□□□ -1.61
SNCA-213ENST00000618500 FUBP3Q96I24 572 aaKnown RBP eCLIP4.97□□□□□ -1.61
SNCA-213ENST00000618500 SH2D3AQ9BRG2 576 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 LRRC2Q9BYS8 371 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 TM6SF1Q9BZW5 370 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 SLITRK6Q9H5Y7 841 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 COMMD8Q9NX08 183 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 ORC3Q9UBD5 711 aaPredicted RBP4.97□□□□□ -1.61
SNCA-213ENST00000618500 NUB1Q9Y5A7 615 aa4.97□□□□□ -1.61
SNCA-213ENST00000618500 PTPRZ1P23471 2315 aaPredicted RBP4.96□□□□□ -1.61
SNCA-213ENST00000618500 SPEGQ15772 3267 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 A0A1B0GTW7 788 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 YKT6O15498 198 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 TNFSF14O43557 240 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 CCNT1O60563 726 aaKnown RBP4.96□□□□□ -1.62
SNCA-213ENST00000618500 TOM1L1O75674 476 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 GJA1P17302 382 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 PSMA5P28066 241 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 AVPR1AP37288 418 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 FAM193AP78312 1265 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 PDE4CQ08493 712 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 DUSP4Q13115 394 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 NOLC1Q14978 699 aaKnown RBP eCLIP4.96□□□□□ -1.62
SNCA-213ENST00000618500 CALCRLQ16602 461 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 ZNF568Q3ZCX4 644 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 TAS1R3Q7RTX0 852 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 LIMS2Q7Z4I7 341 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 TPH2Q8IWU9 490 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 RIN3Q8TB24 985 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 DRC1Q96MC2 740 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 CCDC43Q96MW1 224 aaKnown RBP4.96□□□□□ -1.62
SNCA-213ENST00000618500 PNKPQ96T60 521 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 GOLGA2P5Q9HBQ8 144 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 TMEM74BQ9NUR3 256 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 USP36Q9P275 1121 aaKnown RBP4.96□□□□□ -1.62
SNCA-213ENST00000618500 PCDHA12Q9UN75 941 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 GDAQ9Y2T3 454 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 PCDHB9Q9Y5E1 797 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 USO1O60763 962 aaKnown RBP4.96□□□□□ -1.62
SNCA-213ENST00000618500 APODP05090 189 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 HLA-EP13747 358 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 HNRNPLP14866 589 aaKnown RBP eCLIP4.96□□□□□ -1.62
SNCA-213ENST00000618500 GNSP15586 552 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 IGFBP6P24592 240 aaPredicted RBP4.96□□□□□ -1.62
SNCA-213ENST00000618500 GUCY2CP25092 1073 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 OXTRP30559 389 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 TUBP50607 506 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 CYP4F8P98187 520 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 BFSP1Q12934 665 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 SERINC3Q13530 473 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 ENPP2Q13822 863 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 NFE2Q16621 373 aaPredicted RBP4.96□□□□□ -1.62
SNCA-213ENST00000618500 SLC10A6Q3KNW5 377 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 UAP1L1Q3KQV9 507 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 SYCP2LQ5T4T6 812 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 HAUS3Q68CZ6 603 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 CPLX2Q6PUV4 134 aaKnown RBP4.96□□□□□ -1.62
SNCA-213ENST00000618500 PCSK4Q6UW60 755 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 ZNF605Q86T29 641 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 SLCO6A1Q86UG4 719 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 ETFBKMTQ8IXQ9 262 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms