RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 UNC13DQ70J99 1090 aa15.58■□□□□ 0.08
COL5A1-208ENST00000618395 CPXCR1Q8N123 301 aa15.58■□□□□ 0.08
COL5A1-208ENST00000618395 SEPT9Q9UHD8 586 aaPredicted RBP15.58■□□□□ 0.08
COL5A1-208ENST00000618395 FOXN3O00409 490 aaPredicted RBP15.58■□□□□ 0.08
COL5A1-208ENST00000618395 RAB15P59190 212 aa15.58■□□□□ 0.08
COL5A1-208ENST00000618395 TBCELQ5QJ74 424 aa15.58■□□□□ 0.08
COL5A1-208ENST00000618395 RBM20Q5T481 1227 aaKnown RBP15.58■□□□□ 0.08
COL5A1-208ENST00000618395 RGS18Q9NS28 235 aa15.58■□□□□ 0.08
COL5A1-208ENST00000618395 SYNPO2Q9UMS6 1093 aa15.58■□□□□ 0.08
COL5A1-208ENST00000618395 ABCG2Q9UNQ0 655 aa15.58■□□□□ 0.08
COL5A1-208ENST00000618395 SLC8A2Q9UPR5 921 aa15.58■□□□□ 0.08
COL5A1-208ENST00000618395 EIF2AK2P19525 551 aaKnown RBP15.58■□□□□ 0.08
COL5A1-208ENST00000618395 HPCAP84074 193 aa15.58■□□□□ 0.08
COL5A1-208ENST00000618395 TFDP1Q14186 410 aa15.58■□□□□ 0.08
COL5A1-208ENST00000618395 FAM98BQ52LJ0 330 aaKnown RBP15.58■□□□□ 0.08
COL5A1-208ENST00000618395 UTS2BQ765I0 119 aa15.58■□□□□ 0.08
COL5A1-208ENST00000618395 ARHGEF26Q96DR7 871 aa15.58■□□□□ 0.08
COL5A1-208ENST00000618395 MTG1Q9BT17 334 aaPredicted RBP15.58■□□□□ 0.08
COL5A1-208ENST00000618395 ANXA13P27216 316 aa15.58■□□□□ 0.08
COL5A1-208ENST00000618395 ALDH6A1Q02252 535 aaKnown RBP15.58■□□□□ 0.08
COL5A1-208ENST00000618395 SPIRE1Q08AE8 756 aa15.58■□□□□ 0.08
COL5A1-208ENST00000618395 SLC18A3Q16572 532 aa15.58■□□□□ 0.08
COL5A1-208ENST00000618395 PRMT9Q6P2P2 845 aa15.58■□□□□ 0.08
COL5A1-208ENST00000618395 MND1Q9BWT6 205 aa15.58■□□□□ 0.08
COL5A1-208ENST00000618395 SAR1AQ9NR31 198 aa15.58■□□□□ 0.08
COL5A1-208ENST00000618395 FRMPD2Q68DX3 1309 aaPredicted RBP15.57■□□□□ 0.08
COL5A1-208ENST00000618395 WDR17Q8IZU2 1322 aa15.57■□□□□ 0.08
COL5A1-208ENST00000618395 ITGA3P26006 1051 aa15.57■□□□□ 0.08
COL5A1-208ENST00000618395 SPRP35270 261 aaPredicted RBP15.57■□□□□ 0.08
COL5A1-208ENST00000618395 IREB2P48200 963 aaKnown RBP15.57■□□□□ 0.08
COL5A1-208ENST00000618395 RABL6Q3YEC7 729 aaPredicted RBP15.57■□□□□ 0.08
COL5A1-208ENST00000618395 FUT11Q495W5 492 aa15.57■□□□□ 0.08
COL5A1-208ENST00000618395 PYDC2Q56P42 97 aa15.57■□□□□ 0.08
COL5A1-208ENST00000618395 FBXO42Q6P3S6 717 aa15.57■□□□□ 0.08
COL5A1-208ENST00000618395 IFNL3Q8IZI9 196 aa15.57■□□□□ 0.08
COL5A1-208ENST00000618395 CENPIQ92674 756 aaPredicted RBP15.57■□□□□ 0.08
COL5A1-208ENST00000618395 METTL22Q9BUU2 404 aaPredicted RBP15.57■□□□□ 0.08
COL5A1-208ENST00000618395 CYP51A1Q16850 503 aa15.57■□□□□ 0.08
COL5A1-208ENST00000618395 OR8H3Q8N146 312 aa15.57■□□□□ 0.08
COL5A1-208ENST00000618395 SCAIQ8N9R8 606 aa15.57■□□□□ 0.08
COL5A1-208ENST00000618395 TRPV5Q9NQA5 729 aa15.57■□□□□ 0.08
COL5A1-208ENST00000618395 KDM5DQ9BY66 1539 aa15.57■□□□□ 0.08
COL5A1-208ENST00000618395 PRXQ9BXM0 1461 aa15.57■□□□□ 0.08
COL5A1-208ENST00000618395 CLRN2A0PK11 232 aa15.57■□□□□ 0.08
COL5A1-208ENST00000618395 KPNA1P52294 538 aaPredicted RBP15.57■□□□□ 0.08
COL5A1-208ENST00000618395 TNFAIP8L3Q5GJ75 292 aa15.57■□□□□ 0.08
COL5A1-208ENST00000618395 OLFML2AQ68BL7 652 aa15.57■□□□□ 0.08
COL5A1-208ENST00000618395 RCOR2Q8IZ40 523 aa15.57■□□□□ 0.08
COL5A1-208ENST00000618395 FMR1NBQ8N0W7 255 aaPredicted RBP15.57■□□□□ 0.08
COL5A1-208ENST00000618395 SUCLG2Q96I99 432 aa15.57■□□□□ 0.08
COL5A1-208ENST00000618395 OVGP1Q12889 678 aa15.57■□□□□ 0.08
COL5A1-208ENST00000618395 ITGA9Q13797 1035 aa15.57■□□□□ 0.08
COL5A1-208ENST00000618395 SEL1L3Q68CR1 1132 aa15.57■□□□□ 0.08
COL5A1-208ENST00000618395 OR8H1Q8NGG4 311 aa15.57■□□□□ 0.08
COL5A1-208ENST00000618395 HAVCR1Q96D42 359 aa15.57■□□□□ 0.08
COL5A1-208ENST00000618395 XKR8Q9H6D3 395 aa15.57■□□□□ 0.08
COL5A1-208ENST00000618395 NDFIP2Q9NV92 336 aa15.57■□□□□ 0.08
COL5A1-208ENST00000618395 MRPL11Q9Y3B7 192 aaKnown RBP15.57■□□□□ 0.08
COL5A1-208ENST00000618395 CYP2D7A0A087X1C5 515 aa15.57■□□□□ 0.08
COL5A1-208ENST00000618395 EPHB2P29323 1055 aa15.57■□□□□ 0.08
COL5A1-208ENST00000618395 BROXQ5VW32 411 aa15.57■□□□□ 0.08
COL5A1-208ENST00000618395 TMEM120AQ9BXJ8 343 aa15.57■□□□□ 0.08
COL5A1-208ENST00000618395 PUS7LQ9H0K6 701 aaKnown RBP15.57■□□□□ 0.08
COL5A1-208ENST00000618395 MROH5Q6ZUA9 1318 aa15.57■□□□□ 0.08
COL5A1-208ENST00000618395 PDK3Q15120 406 aa15.57■□□□□ 0.08
COL5A1-208ENST00000618395 TMEM237Q96Q45 408 aa15.57■□□□□ 0.08
COL5A1-208ENST00000618395 RTN2O75298 545 aa15.56■□□□□ 0.08
COL5A1-208ENST00000618395 ATP5BP06576 529 aaKnown RBP15.56■□□□□ 0.08
COL5A1-208ENST00000618395 SYTL3Q4VX76 610 aa15.56■□□□□ 0.08
COL5A1-208ENST00000618395 SLC25A41Q8N5S1 370 aa15.56■□□□□ 0.08
COL5A1-208ENST00000618395 PPP1R14AQ96A00 147 aa15.56■□□□□ 0.08
COL5A1-208ENST00000618395 TRMT13Q9NUP7 481 aaKnown RBP15.56■□□□□ 0.08
COL5A1-208ENST00000618395 ATG7O95352 703 aa15.56■□□□□ 0.08
COL5A1-208ENST00000618395 ETS2P15036 469 aa15.56■□□□□ 0.08
COL5A1-208ENST00000618395 CYP4Z2PQ8N1L4 340 aa15.56■□□□□ 0.08
COL5A1-208ENST00000618395 ZNF713Q8N859 430 aaPredicted RBP15.56■□□□□ 0.08
COL5A1-208ENST00000618395 AGAP11Q8TF27 550 aa15.56■□□□□ 0.08
COL5A1-208ENST00000618395 C9orf72Q96LT7 481 aa15.56■□□□□ 0.08
COL5A1-208ENST00000618395 DNAJC7Q99615 494 aa15.56■□□□□ 0.08
COL5A1-208ENST00000618395 MAGI1Q96QZ7 1491 aaPredicted RBP15.56■□□□□ 0.08
COL5A1-208ENST00000618395 EAPPQ56P03 285 aaPredicted RBP15.56■□□□□ 0.08
COL5A1-208ENST00000618395 PRR23CQ6ZRP0 262 aa15.56■□□□□ 0.08
COL5A1-208ENST00000618395 STOX2Q9P2F5 926 aaPredicted RBP15.56■□□□□ 0.08
COL5A1-208ENST00000618395 STK32CQ86UX6 486 aa15.56■□□□□ 0.08
COL5A1-208ENST00000618395 DLG3Q92796 817 aa15.56■□□□□ 0.08
COL5A1-208ENST00000618395 SPATA16Q9BXB7 569 aa15.56■□□□□ 0.08
COL5A1-208ENST00000618395 ADAM33Q9BZ11 813 aa15.56■□□□□ 0.08
COL5A1-208ENST00000618395 NUDT5Q9UKK9 219 aa15.56■□□□□ 0.08
COL5A1-208ENST00000618395 GDAQ9Y2T3 454 aa15.56■□□□□ 0.08
COL5A1-208ENST00000618395 WEE2P0C1S8 567 aa15.56■□□□□ 0.08
COL5A1-208ENST00000618395 NAA20P61599 178 aa15.56■□□□□ 0.08
COL5A1-208ENST00000618395 GTF2H3Q13889 308 aa15.56■□□□□ 0.08
COL5A1-208ENST00000618395 REXO1L1PQ8IX06 675 aa15.56■□□□□ 0.08
COL5A1-208ENST00000618395 DHRSXQ8N5I4 330 aa15.56■□□□□ 0.08
COL5A1-208ENST00000618395 KCTD14Q9BQ13 255 aaPredicted RBP15.56■□□□□ 0.08
COL5A1-208ENST00000618395 ZCWPW1Q9H0M4 648 aa15.56■□□□□ 0.08
COL5A1-208ENST00000618395 EPB41L1Q9H4G0 881 aa15.56■□□□□ 0.08
COL5A1-208ENST00000618395 PNPLA8Q9NP80 782 aa15.56■□□□□ 0.08
COL5A1-208ENST00000618395 ARHGEF38Q9NXL2 777 aa15.56■□□□□ 0.08
COL5A1-208ENST00000618395 ZNF879B4DU55 563 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms