RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 MAGEA9P43362 315 aa18.49■□□□□ 0.55
CNOT3-209ENST00000617930 CORO7P57737 925 aa18.49■□□□□ 0.55
CNOT3-209ENST00000617930 SNX1Q13596 522 aa18.49■□□□□ 0.55
CNOT3-209ENST00000617930 TTC19Q6DKK2 380 aaPredicted RBP18.49■□□□□ 0.55
CNOT3-209ENST00000617930 PPP1R2P3Q6NXS1 205 aa18.49■□□□□ 0.55
CNOT3-209ENST00000617930 NOTUMQ6P988 496 aa18.49■□□□□ 0.55
CNOT3-209ENST00000617930 TMC3Q7Z5M5 1100 aa18.49■□□□□ 0.55
CNOT3-209ENST00000617930 SERINC5Q86VE9 423 aa18.49■□□□□ 0.55
CNOT3-209ENST00000617930 SH2D3CQ8N5H7 860 aa18.49■□□□□ 0.55
CNOT3-209ENST00000617930 ARRDC4Q8NCT1 418 aa18.49■□□□□ 0.55
CNOT3-209ENST00000617930 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.49■□□□□ 0.55
CNOT3-209ENST00000617930 UBA3Q8TBC4 463 aa18.49■□□□□ 0.55
CNOT3-209ENST00000617930 ACSF2Q96CM8 615 aaPredicted RBP18.49■□□□□ 0.55
CNOT3-209ENST00000617930 MRPL45Q9BRJ2 306 aaKnown RBP18.49■□□□□ 0.55
CNOT3-209ENST00000617930 PLEKHA5Q9HAU0 1116 aa18.49■□□□□ 0.55
CNOT3-209ENST00000617930 BARX2Q9UMQ3 279 aaPredicted RBP18.49■□□□□ 0.55
CNOT3-209ENST00000617930 CITO14578 2027 aa18.49■□□□□ 0.55
CNOT3-209ENST00000617930 PI4K2BG5E9Z4 385 aa18.48■□□□□ 0.55
CNOT3-209ENST00000617930 GOLGA8SH3BPF8 625 aa18.48■□□□□ 0.55
CNOT3-209ENST00000617930 HCRTO43612 131 aa18.48■□□□□ 0.55
CNOT3-209ENST00000617930 PFKMP08237 780 aa18.48■□□□□ 0.55
CNOT3-209ENST00000617930 CTSHP09668 335 aa18.48■□□□□ 0.55
CNOT3-209ENST00000617930 ACLYP53396 1101 aa18.48■□□□□ 0.55
CNOT3-209ENST00000617930 DRG2P55039 364 aaKnown RBP18.48■□□□□ 0.55
CNOT3-209ENST00000617930 UBAP2Q5T6F2 1119 aaKnown RBP18.48■□□□□ 0.55
CNOT3-209ENST00000617930 FAM228AQ86W67 206 aa18.48■□□□□ 0.55
CNOT3-209ENST00000617930 XYLT1Q86Y38 959 aa18.48■□□□□ 0.55
CNOT3-209ENST00000617930 NT5DC4Q86YG4 428 aa18.48■□□□□ 0.55
CNOT3-209ENST00000617930 CD302Q8IX05 232 aa18.48■□□□□ 0.55
CNOT3-209ENST00000617930 SLAIN1Q8ND83 568 aa18.48■□□□□ 0.55
CNOT3-209ENST00000617930 OR2W6PQ8NHA6 318 aa18.48■□□□□ 0.55
CNOT3-209ENST00000617930 FBXO25Q8TCJ0 367 aa18.48■□□□□ 0.55
CNOT3-209ENST00000617930 RNF25Q96BH1 459 aaPredicted RBP18.48■□□□□ 0.55
CNOT3-209ENST00000617930 HEXIM2Q96MH2 286 aaKnown RBP18.48■□□□□ 0.55
CNOT3-209ENST00000617930 LPIN3Q9BQK8 851 aa18.48■□□□□ 0.55
CNOT3-209ENST00000617930 APOL6Q9BWW8 343 aa18.48■□□□□ 0.55
CNOT3-209ENST00000617930 RAB17Q9H0T7 212 aa18.48■□□□□ 0.55
CNOT3-209ENST00000617930 KLK14Q9P0G3 267 aa18.48■□□□□ 0.55
CNOT3-209ENST00000617930 EBAG9O00559 213 aa18.47■□□□□ 0.55
CNOT3-209ENST00000617930 CHRNA1P02708 482 aa18.47■□□□□ 0.55
CNOT3-209ENST00000617930 CDC42EP1Q00587 391 aa18.47■□□□□ 0.55
CNOT3-209ENST00000617930 MGAT3Q09327 533 aa18.47■□□□□ 0.55
CNOT3-209ENST00000617930 CNGA2Q16280 664 aa18.47■□□□□ 0.55
CNOT3-209ENST00000617930 SMYD5Q6GMV2 418 aa18.47■□□□□ 0.55
CNOT3-209ENST00000617930 SESTD1Q86VW0 696 aa18.47■□□□□ 0.55
CNOT3-209ENST00000617930 EMC1Q8N766 993 aa18.47■□□□□ 0.55
CNOT3-209ENST00000617930 EPB41L4BQ9H329 900 aa18.47■□□□□ 0.55
CNOT3-209ENST00000617930 RABEP2Q9H5N1 569 aa18.47■□□□□ 0.55
CNOT3-209ENST00000617930 TRMT13Q9NUP7 481 aaKnown RBP18.47■□□□□ 0.55
CNOT3-209ENST00000617930 CNTN3Q9P232 1028 aa18.47■□□□□ 0.55
CNOT3-209ENST00000617930 MTUS1Q9ULD2 1270 aa18.47■□□□□ 0.55
CNOT3-209ENST00000617930 PIN4Q9Y237 131 aaKnown RBP18.47■□□□□ 0.55
CNOT3-209ENST00000617930 CDY2AQ9Y6F7 541 aa18.47■□□□□ 0.55
CNOT3-209ENST00000617930 ANKRD65E5RJM6 399 aa18.47■□□□□ 0.55
CNOT3-209ENST00000617930 KRT10P13645 584 aa18.47■□□□□ 0.55
CNOT3-209ENST00000617930 IGFBP6P24592 240 aaPredicted RBP18.47■□□□□ 0.55
CNOT3-209ENST00000617930 SSR1P43307 286 aaKnown RBP18.47■□□□□ 0.55
CNOT3-209ENST00000617930 FNTAP49354 379 aa18.47■□□□□ 0.55
CNOT3-209ENST00000617930 ATP1A2P50993 1020 aa18.47■□□□□ 0.55
CNOT3-209ENST00000617930 PDCLQ13371 301 aa18.47■□□□□ 0.55
CNOT3-209ENST00000617930 SGO2Q562F6 1265 aa18.47■□□□□ 0.55
CNOT3-209ENST00000617930 DCUN1D2Q6PH85 259 aa18.47■□□□□ 0.55
CNOT3-209ENST00000617930 CCDC105Q8IYK2 499 aa18.47■□□□□ 0.55
CNOT3-209ENST00000617930 DCLK3Q9C098 648 aa18.47■□□□□ 0.55
CNOT3-209ENST00000617930 PLAAQ9Y263 795 aa18.47■□□□□ 0.55
CNOT3-209ENST00000617930 SCN1AP35498 2009 aa18.46■□□□□ 0.55
CNOT3-209ENST00000617930 SIGLEC16A6NMB1 481 aa18.46■□□□□ 0.55
CNOT3-209ENST00000617930 SPTLC1O15269 473 aa18.46■□□□□ 0.55
CNOT3-209ENST00000617930 MED7O43513 233 aa18.46■□□□□ 0.55
CNOT3-209ENST00000617930 MYCP01106 439 aaPredicted RBP18.46■□□□□ 0.55
CNOT3-209ENST00000617930 GNAT1P11488 350 aa18.46■□□□□ 0.55
CNOT3-209ENST00000617930 CRYBB1P53674 252 aaPredicted RBP18.46■□□□□ 0.55
CNOT3-209ENST00000617930 PLTPP55058 493 aa18.46■□□□□ 0.55
CNOT3-209ENST00000617930 MRPS6P82932 125 aaKnown RBP18.46■□□□□ 0.55
CNOT3-209ENST00000617930 SOX4Q06945 474 aaPredicted RBP18.46■□□□□ 0.55
CNOT3-209ENST00000617930 KDM7AQ6ZMT4 941 aa18.46■□□□□ 0.55
CNOT3-209ENST00000617930 DPH6Q7L8W6 267 aa18.46■□□□□ 0.55
CNOT3-209ENST00000617930 SMG8Q8ND04 991 aaKnown RBP18.46■□□□□ 0.55
CNOT3-209ENST00000617930 EXD1Q8NHP7 514 aa18.46■□□□□ 0.55
CNOT3-209ENST00000617930 RAPGEF5Q92565 580 aa18.46■□□□□ 0.55
CNOT3-209ENST00000617930 PIWIL1Q96J94 861 aaKnown RBP18.46■□□□□ 0.55
CNOT3-209ENST00000617930 DERAQ9Y315 318 aa18.46■□□□□ 0.55
CNOT3-209ENST00000617930 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.46■□□□□ 0.55
CNOT3-209ENST00000617930 SNX9Q9Y5X1 595 aa18.46■□□□□ 0.55
CNOT3-209ENST00000617930 RALGAPA2Q2PPJ7 1873 aa18.46■□□□□ 0.55
CNOT3-209ENST00000617930 SMIM28A0A1B0GU29 152 aa18.45■□□□□ 0.54
CNOT3-209ENST00000617930 GOLGA6L10A6NI86 522 aa18.45■□□□□ 0.54
CNOT3-209ENST00000617930 M0QYV0 167 aa18.45■□□□□ 0.54
CNOT3-209ENST00000617930 PIK3R2O00459 728 aa18.45■□□□□ 0.54
CNOT3-209ENST00000617930 GABBR2O75899 941 aa18.45■□□□□ 0.54
CNOT3-209ENST00000617930 VDRP11473 427 aa18.45■□□□□ 0.54
CNOT3-209ENST00000617930 IL1R2P27930 398 aa18.45■□□□□ 0.54
CNOT3-209ENST00000617930 PSMC1P62191 440 aaKnown RBP18.45■□□□□ 0.54
CNOT3-209ENST00000617930 DHX9Q08211 1270 aaKnown RBP18.45■□□□□ 0.54
CNOT3-209ENST00000617930 ITGA7Q13683 1181 aa18.45■□□□□ 0.54
CNOT3-209ENST00000617930 MTFR1Q15390 333 aa18.45■□□□□ 0.54
CNOT3-209ENST00000617930 C9orf57Q5W0N0 161 aa18.45■□□□□ 0.54
CNOT3-209ENST00000617930 TRNP1Q6NT89 227 aa18.45■□□□□ 0.54
CNOT3-209ENST00000617930 TAF2Q6P1X5 1199 aa18.45■□□□□ 0.54
CNOT3-209ENST00000617930 MFSD7Q6UXD7 560 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms