RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 CTC1Q2NKJ3 1217 aa14.05□□□□□ -0.16
PCDHA11-202ENST00000616325 RABGAP1LQ5R372 815 aa14.05□□□□□ -0.16
PCDHA11-202ENST00000616325 DCUN1D2Q6PH85 259 aa14.05□□□□□ -0.16
PCDHA11-202ENST00000616325 RBM44Q6ZP01 1051 aaKnown RBP14.05□□□□□ -0.16
PCDHA11-202ENST00000616325 C15orf52Q6ZUT6 534 aaKnown RBP14.05□□□□□ -0.16
PCDHA11-202ENST00000616325 PRPF39Q86UA1 669 aaKnown RBP14.05□□□□□ -0.16
PCDHA11-202ENST00000616325 CTAGE3PQ8IX95 158 aa14.05□□□□□ -0.16
PCDHA11-202ENST00000616325 FAM71AQ8IYT1 594 aa14.05□□□□□ -0.16
PCDHA11-202ENST00000616325 PYROXD1Q8WU10 500 aa14.05□□□□□ -0.16
PCDHA11-202ENST00000616325 UMODL1Q5DID0 1318 aa14.04□□□□□ -0.16
PCDHA11-202ENST00000616325 FSCN2O14926 492 aa14.04□□□□□ -0.16
PCDHA11-202ENST00000616325 P4HBP07237 508 aaKnown RBP14.04□□□□□ -0.16
PCDHA11-202ENST00000616325 ITGA2BP08514 1039 aa14.04□□□□□ -0.16
PCDHA11-202ENST00000616325 ADSSP30520 456 aa14.04□□□□□ -0.16
PCDHA11-202ENST00000616325 GAD2Q05329 585 aa14.04□□□□□ -0.16
PCDHA11-202ENST00000616325 LSAMPQ13449 338 aa14.04□□□□□ -0.16
PCDHA11-202ENST00000616325 PTK6Q13882 451 aa14.04□□□□□ -0.16
PCDHA11-202ENST00000616325 KCNT1Q5JUK3 1230 aa14.04□□□□□ -0.16
PCDHA11-202ENST00000616325 SH2D4BQ5SQS7 431 aa14.04□□□□□ -0.16
PCDHA11-202ENST00000616325 C3orf62Q6ZUJ4 267 aa14.04□□□□□ -0.16
PCDHA11-202ENST00000616325 ARID3BQ8IVW6 561 aaPredicted RBP14.04□□□□□ -0.16
PCDHA11-202ENST00000616325 GCNAQ96QF7 691 aa14.04□□□□□ -0.16
PCDHA11-202ENST00000616325 TCHPQ9BT92 498 aa14.04□□□□□ -0.16
PCDHA11-202ENST00000616325 SLC13A1Q9BZW2 595 aa14.04□□□□□ -0.16
PCDHA11-202ENST00000616325 DNPEPQ9ULA0 475 aa14.04□□□□□ -0.16
PCDHA11-202ENST00000616325 COL14A1Q05707 1796 aaKnown RBP14.04□□□□□ -0.16
PCDHA11-202ENST00000616325 MYOCOSA0A1B0GUC4 107 aa14.04□□□□□ -0.16
PCDHA11-202ENST00000616325 ZNF189O75820 626 aaPredicted RBP14.04□□□□□ -0.16
PCDHA11-202ENST00000616325 KRT1P04264 644 aa14.04□□□□□ -0.16
PCDHA11-202ENST00000616325 ATXN3P54252 364 aaPredicted RBP14.04□□□□□ -0.16
PCDHA11-202ENST00000616325 CAV1Q03135 178 aa14.04□□□□□ -0.16
PCDHA11-202ENST00000616325 WDR44Q5JSH3 913 aa14.04□□□□□ -0.16
PCDHA11-202ENST00000616325 ACAD10Q6JQN1 1059 aa14.04□□□□□ -0.16
PCDHA11-202ENST00000616325 ANKS1BQ7Z6G8 1248 aa14.04□□□□□ -0.16
PCDHA11-202ENST00000616325 LRRN4Q8WUT4 740 aa14.04□□□□□ -0.16
PCDHA11-202ENST00000616325 PPP2R3CQ969Q6 453 aa14.04□□□□□ -0.16
PCDHA11-202ENST00000616325 ZDHHC15Q96MV8 337 aa14.04□□□□□ -0.16
PCDHA11-202ENST00000616325 NR1H4Q96RI1 486 aaPredicted RBP14.04□□□□□ -0.16
PCDHA11-202ENST00000616325 MIS12Q9H081 205 aa14.04□□□□□ -0.16
PCDHA11-202ENST00000616325 TELO2Q9Y4R8 837 aa14.04□□□□□ -0.16
PCDHA11-202ENST00000616325 LAMB2P55268 1798 aa14.04□□□□□ -0.16
PCDHA11-202ENST00000616325 POTEJP0CG39 1038 aa14.03□□□□□ -0.16
PCDHA11-202ENST00000616325 RPL7AP62424 266 aaKnown RBP14.03□□□□□ -0.16
PCDHA11-202ENST00000616325 SLC25A3Q00325 362 aa14.03□□□□□ -0.16
PCDHA11-202ENST00000616325 DLG1Q12959 904 aa14.03□□□□□ -0.16
PCDHA11-202ENST00000616325 SPP2Q13103 211 aa14.03□□□□□ -0.16
PCDHA11-202ENST00000616325 NCOA4Q13772 614 aa14.03□□□□□ -0.16
PCDHA11-202ENST00000616325 TTLL12Q14166 644 aaPredicted RBP14.03□□□□□ -0.16
PCDHA11-202ENST00000616325 LENG1Q96BZ8 264 aaPredicted RBP14.03□□□□□ -0.16
PCDHA11-202ENST00000616325 OXNAD1Q96HP4 312 aaPredicted RBP14.03□□□□□ -0.16
PCDHA11-202ENST00000616325 PANX3Q96QZ0 392 aa14.03□□□□□ -0.16
PCDHA11-202ENST00000616325 MECRQ9BV79 373 aa14.03□□□□□ -0.16
PCDHA11-202ENST00000616325 ZNF341Q9BYN7 854 aa14.03□□□□□ -0.16
PCDHA11-202ENST00000616325 APPL1Q9UKG1 709 aa14.03□□□□□ -0.16
PCDHA11-202ENST00000616325 AGTPBP1Q9UPW5 1226 aa14.03□□□□□ -0.16
PCDHA11-202ENST00000616325 LOC100653049A0A140TA62 436 aa14.03□□□□□ -0.16
PCDHA11-202ENST00000616325 SPECC1L-ADORA2AF8WAN1 911 aa14.03□□□□□ -0.16
PCDHA11-202ENST00000616325 PIK3R2O00459 728 aa14.03□□□□□ -0.16
PCDHA11-202ENST00000616325 KRT34O76011 436 aa14.03□□□□□ -0.16
PCDHA11-202ENST00000616325 NPTX2P47972 431 aa14.03□□□□□ -0.16
PCDHA11-202ENST00000616325 ADARP55265 1226 aaKnown RBP14.03□□□□□ -0.16
PCDHA11-202ENST00000616325 CDK16Q00536 496 aa14.03□□□□□ -0.16
PCDHA11-202ENST00000616325 MXRA8Q9BRK3 442 aa14.03□□□□□ -0.16
PCDHA11-202ENST00000616325 GRIP2Q9C0E4 1043 aa14.03□□□□□ -0.16
PCDHA11-202ENST00000616325 PSMC3IPQ9P2W1 217 aaPredicted RBP14.03□□□□□ -0.16
PCDHA11-202ENST00000616325 SEPT9Q9UHD8 586 aaPredicted RBP14.03□□□□□ -0.16
PCDHA11-202ENST00000616325 TRAFD1O14545 582 aaPredicted RBP14.03□□□□□ -0.16
PCDHA11-202ENST00000616325 TMPRSS15P98073 1019 aa14.03□□□□□ -0.16
PCDHA11-202ENST00000616325 ORC1Q13415 861 aa14.03□□□□□ -0.16
PCDHA11-202ENST00000616325 MTERF2Q49AM1 385 aa14.03□□□□□ -0.16
PCDHA11-202ENST00000616325 BRDTQ58F21 947 aaPredicted RBP14.03□□□□□ -0.16
PCDHA11-202ENST00000616325 CMPK2Q5EBM0 449 aa14.03□□□□□ -0.16
PCDHA11-202ENST00000616325 RHPN2Q8IUC4 686 aa14.03□□□□□ -0.16
PCDHA11-202ENST00000616325 RNF168Q8IYW5 571 aaPredicted RBP14.03□□□□□ -0.16
PCDHA11-202ENST00000616325 CHURC1Q8WUH1 139 aa14.03□□□□□ -0.16
PCDHA11-202ENST00000616325 GMCL1Q96IK5 515 aa14.03□□□□□ -0.16
PCDHA11-202ENST00000616325 ACAP3Q96P50 834 aa14.03□□□□□ -0.16
PCDHA11-202ENST00000616325 TUBB6Q9BUF5 446 aa14.03□□□□□ -0.16
PCDHA11-202ENST00000616325 RANBP17Q9H2T7 1088 aaKnown RBP14.03□□□□□ -0.16
PCDHA11-202ENST00000616325 TMCO1Q9UM00 188 aa14.03□□□□□ -0.16
PCDHA11-202ENST00000616325 RREB1Q92766 1687 aa14.02□□□□□ -0.16
PCDHA11-202ENST00000616325 MAGEB2O15479 319 aa14.02□□□□□ -0.16
PCDHA11-202ENST00000616325 GCAP28676 217 aa14.02□□□□□ -0.16
PCDHA11-202ENST00000616325 AQP4P55087 323 aa14.02□□□□□ -0.16
PCDHA11-202ENST00000616325 OSTNP61366 133 aa14.02□□□□□ -0.16
PCDHA11-202ENST00000616325 GSTA3Q16772 222 aa14.02□□□□□ -0.16
PCDHA11-202ENST00000616325 PABPC1LQ4VXU2 614 aaKnown RBP14.02□□□□□ -0.16
PCDHA11-202ENST00000616325 SFT2D3Q587I9 215 aa14.02□□□□□ -0.16
PCDHA11-202ENST00000616325 SESTD1Q86VW0 696 aa14.02□□□□□ -0.16
PCDHA11-202ENST00000616325 ULK2Q8IYT8 1036 aa14.02□□□□□ -0.16
PCDHA11-202ENST00000616325 OR6Y1Q8NGX8 325 aa14.02□□□□□ -0.16
PCDHA11-202ENST00000616325 PTCD3Q96EY7 689 aaKnown RBP14.02□□□□□ -0.16
PCDHA11-202ENST00000616325 TAAR1Q96RJ0 339 aa14.02□□□□□ -0.16
PCDHA11-202ENST00000616325 BLOC1S6Q9UL45 172 aa14.02□□□□□ -0.16
PCDHA11-202ENST00000616325 ACTL7BQ9Y614 415 aa14.02□□□□□ -0.16
PCDHA11-202ENST00000616325 STK24Q9Y6E0 443 aa14.02□□□□□ -0.16
PCDHA11-202ENST00000616325 LRRIQ4A6NIV6 560 aa14.02□□□□□ -0.17
PCDHA11-202ENST00000616325 DKC1O60832 514 aaKnown RBP eCLIP14.02□□□□□ -0.17
PCDHA11-202ENST00000616325 SORBS2O94875 1100 aaKnown RBP14.02□□□□□ -0.17
PCDHA11-202ENST00000616325 TMCC1O94876 653 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms