RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 LMO3Q8TAP4 145 aa6.98□□□□□ -1.29
LMO3-235ENST00000616247 E2F7Q96AV8 911 aa6.98□□□□□ -1.29
LMO3-235ENST00000616247 IFT43Q96FT9 208 aa6.98□□□□□ -1.29
LMO3-235ENST00000616247 PRPF18Q99633 342 aaKnown RBP6.98□□□□□ -1.29
LMO3-235ENST00000616247 FAM213AQ9BRX8 229 aa6.98□□□□□ -1.29
LMO3-235ENST00000616247 CALN1Q9BXU9 219 aa6.98□□□□□ -1.29
LMO3-235ENST00000616247 PHACTR1Q9C0D0 580 aa6.98□□□□□ -1.29
LMO3-235ENST00000616247 NYXQ9GZU5 481 aa6.98□□□□□ -1.29
LMO3-235ENST00000616247 WWP1Q9H0M0 922 aa6.98□□□□□ -1.29
LMO3-235ENST00000616247 XPO7Q9UIA9 1087 aaKnown RBP6.98□□□□□ -1.29
LMO3-235ENST00000616247 RPL26L1Q9UNX3 145 aaKnown RBP6.98□□□□□ -1.29
LMO3-235ENST00000616247 CCDC88AQ3V6T2 1871 aa6.98□□□□□ -1.29
LMO3-235ENST00000616247 ROBO3Q96MS0 1386 aa6.98□□□□□ -1.29
LMO3-235ENST00000616247 F5H6K3 240 aa6.98□□□□□ -1.29
LMO3-235ENST00000616247 STAMBPO95630 424 aa6.98□□□□□ -1.29
LMO3-235ENST00000616247 WEE2P0C1S8 567 aa6.98□□□□□ -1.29
LMO3-235ENST00000616247 RAG1P15918 1043 aa6.98□□□□□ -1.29
LMO3-235ENST00000616247 PMLP29590 882 aa6.98□□□□□ -1.29
LMO3-235ENST00000616247 PRELPP51888 382 aa6.98□□□□□ -1.29
LMO3-235ENST00000616247 HADHBP55084 474 aaKnown RBP6.98□□□□□ -1.29
LMO3-235ENST00000616247 RPL7AP62424 266 aaKnown RBP6.98□□□□□ -1.29
LMO3-235ENST00000616247 AP3B2Q13367 1082 aa6.98□□□□□ -1.29
LMO3-235ENST00000616247 LSAMPQ13449 338 aa6.98□□□□□ -1.29
LMO3-235ENST00000616247 DOK7Q18PE1 504 aa6.98□□□□□ -1.29
LMO3-235ENST00000616247 CLEC16AQ2KHT3 1053 aa6.98□□□□□ -1.29
LMO3-235ENST00000616247 KLHL38Q2WGJ6 581 aa6.98□□□□□ -1.29
LMO3-235ENST00000616247 KBTBD12Q3ZCT8 623 aa6.98□□□□□ -1.29
LMO3-235ENST00000616247 Q4G0T1 1027 aa6.98□□□□□ -1.29
LMO3-235ENST00000616247 XKR9Q5GH70 373 aa6.98□□□□□ -1.29
LMO3-235ENST00000616247 BSPRYQ5W0U4 402 aa6.98□□□□□ -1.29
LMO3-235ENST00000616247 PAOXQ6QHF9 649 aa6.98□□□□□ -1.29
LMO3-235ENST00000616247 ANKS1BQ7Z6G8 1248 aa6.98□□□□□ -1.29
LMO3-235ENST00000616247 SESTD1Q86VW0 696 aa6.98□□□□□ -1.29
LMO3-235ENST00000616247 TRIM42Q8IWZ5 723 aa6.98□□□□□ -1.29
LMO3-235ENST00000616247 FAM71DQ8N9W8 422 aa6.98□□□□□ -1.29
LMO3-235ENST00000616247 PLEKHO2Q8TD55 490 aa6.98□□□□□ -1.29
LMO3-235ENST00000616247 SIKE1Q9BRV8 207 aa6.98□□□□□ -1.29
LMO3-235ENST00000616247 DDX4Q9NQI0 724 aaKnown RBP6.98□□□□□ -1.29
LMO3-235ENST00000616247 TAGLN3Q9UI15 199 aa6.98□□□□□ -1.29
LMO3-235ENST00000616247 SLC24A2Q9UI40 661 aa6.98□□□□□ -1.29
LMO3-235ENST00000616247 TMCO1Q9UM00 188 aa6.98□□□□□ -1.29
LMO3-235ENST00000616247 DAGLAQ9Y4D2 1042 aa6.98□□□□□ -1.29
LMO3-235ENST00000616247 IVNS1ABPQ9Y6Y0 642 aa6.98□□□□□ -1.29
LMO3-235ENST00000616247 NOP56O00567 594 aaKnown RBP6.97□□□□□ -1.29
LMO3-235ENST00000616247 HNRNPDLO14979 420 aaKnown RBP6.97□□□□□ -1.29
LMO3-235ENST00000616247 LIASO43766 372 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 ZNF862O60290 1169 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 ZNF189O75820 626 aaPredicted RBP6.97□□□□□ -1.29
LMO3-235ENST00000616247 FOSP01100 380 aaPredicted RBP6.97□□□□□ -1.29
LMO3-235ENST00000616247 CFHP08603 1231 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 ARP10275 920 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 MAGEA10P43363 369 aaPredicted RBP6.97□□□□□ -1.29
LMO3-235ENST00000616247 SOX10P56693 466 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 RHBDL3P58872 404 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 GPX6P59796 221 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 CYLC2Q14093 348 aaPredicted RBP6.97□□□□□ -1.29
LMO3-235ENST00000616247 DNAL1Q4LDG9 190 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 MSS51Q4VC12 460 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 FNBP1LQ5T0N5 605 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 MROH9Q5TGP6 573 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 POLNQ7Z5Q5 900 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 DHDDSQ86SQ9 333 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 TRIML2Q8N7C3 387 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 LRRN4Q8WUT4 740 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 ERLEC1Q96DZ1 483 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 SERAC1Q96JX3 654 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 FAM81BQ96LP2 452 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 MCEEQ96PE7 176 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 EBF4Q9BQW3 602 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 TRIM56Q9BRZ2 755 aaKnown RBP6.97□□□□□ -1.29
LMO3-235ENST00000616247 POLR3CQ9BUI4 534 aaPredicted RBP6.97□□□□□ -1.29
LMO3-235ENST00000616247 MRPL1Q9BYD6 325 aaKnown RBP6.97□□□□□ -1.29
LMO3-235ENST00000616247 VPS11Q9H270 941 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 TLE6Q9H808 572 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 TMEM206Q9H813 350 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 MRPL47Q9HD33 250 aaKnown RBP6.97□□□□□ -1.29
LMO3-235ENST00000616247 ARHGEF38Q9NXL2 777 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 WRAP73Q9P2S5 460 aaPredicted RBP6.97□□□□□ -1.29
LMO3-235ENST00000616247 GGA1Q9UJY5 639 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 PHF24Q9UPV7 400 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 DTNAQ9Y4J8 743 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 MROH7Q68CQ1 1323 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 TRPM3Q9HCF6 1732 aaPredicted RBP6.97□□□□□ -1.29
LMO3-235ENST00000616247 F8VP50 259 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 ALOX15BO15296 676 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 CST8O60676 142 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 AVILO75366 819 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 TM7SF2O76062 418 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 ASLP04424 464 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 ABHD2P08910 425 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 ELK3P41970 407 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 CMPK2Q5EBM0 449 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 CASC4Q6P4E1 433 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 C1orf228Q6PIY5 440 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 SV2AQ7L0J3 742 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 NET1Q7Z628 596 aaPredicted RBP6.97□□□□□ -1.29
LMO3-235ENST00000616247 RFX6Q8HWS3 928 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 DEFB107AQ8IZN7 70 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 ACTL9Q8TC94 416 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 SHC3Q92529 594 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms