RNA–Protein interactions for RNA: ENST00000615901.4

SPTBN1-207, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 5 BASIC

Gene SPTBN1, Length 10,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-207ENST00000615901 FAM107AO95990 144 aa9.51□□□□□ -0.89
SPTBN1-207ENST00000615901 GCNT1Q02742 428 aa9.51□□□□□ -0.89
SPTBN1-207ENST00000615901 C3orf67Q6ZVT6 689 aa9.51□□□□□ -0.89
SPTBN1-207ENST00000615901 PABPC5Q96DU9 382 aaKnown RBP9.51□□□□□ -0.89
SPTBN1-207ENST00000615901 AIPL1Q9NZN9 384 aa9.51□□□□□ -0.89
SPTBN1-207ENST00000615901 ZNF197O14709 1029 aa9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 NCAM2O15394 837 aa9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 NCAM1P13591 858 aa9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 TMEM62Q0P6H9 643 aa9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 CAPRIN1Q14444 709 aaKnown RBP9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 YAF2Q8IY57 180 aa9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 TGM2P21980 687 aa9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 HSD17B3P37058 310 aa9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 CTCFP49711 727 aaPredicted RBP9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 LAMTOR4Q0VGL1 99 aa9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 RABGAP1LQ5R372 815 aa9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 PCSK9Q8NBP7 692 aaKnown RBP9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 ZNF473Q8WTR7 871 aaKnown RBP9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 FAR2Q96K12 515 aa9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 NAT9Q9BTE0 207 aa9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 SPATC1LQ9H0A9 340 aa9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 ABCF3Q9NUQ8 709 aa9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 FRMD3A2A2Y4 597 aa9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 UBE2Q2LH0YL09 131 aa9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 MYCP01106 439 aaPredicted RBP9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 RBP3P10745 1247 aa9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 AARSP49588 968 aaKnown RBP eCLIP9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 ALDH18A1P54886 795 aaKnown RBP9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 VCPIP1Q96JH7 1222 aa9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 TRAF3IP3Q9Y228 551 aa9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 ARID1BQ8NFD5 2236 aaPredicted RBP9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 H0Y3Z8 333 aa9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 NDUFS3O75489 264 aa9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 NAA30Q147X3 362 aaPredicted RBP9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 PCBP1Q15365 356 aaKnown RBP eCLIP9.5□□□□□ -0.892e-6■■■□□ 14.6
SPTBN1-207ENST00000615901 TDRD10Q5VZ19 366 aaKnown RBP9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 CASKIN2Q8WXE0 1202 aa9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 EIF2AQ9BY44 585 aaKnown RBP9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 UBE2OQ9C0C9 1292 aaKnown RBP9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 TRPC5OSA6NMA1 111 aa9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 ATP9BO43861 1147 aa9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 EPHX2P34913 555 aa9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 PGM1P36871 562 aa9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 ZNF410Q86VK4 478 aa9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 ATP6V0D2Q8N8Y2 350 aa9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 OTUB1Q96FW1 271 aaPredicted RBP9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 FAM167BQ9BTA0 163 aa9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 CINPQ9BW66 212 aaPredicted RBP9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 CAMTA1Q9Y6Y1 1673 aa9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 PIK3CDO00329 1044 aa9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 NFIBO00712 420 aa9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 RGS4P49798 205 aa9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 SERPINB8P50452 374 aa9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 MEI1Q5TIA1 1274 aa9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 APOBEC3HQ6NTF7 200 aaKnown RBP9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 SH3KBP1Q96B97 665 aa9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 CYFIP2Q96F07 1278 aa9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 C20orf96Q9NUD7 363 aaPredicted RBP9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 CSPG5O95196 566 aa9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 CYP2B6P20813 491 aa9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 EEF1DP29692 281 aaKnown RBP9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 LHX1P48742 406 aa9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 PDE1CQ14123 709 aaPredicted RBP9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 CUL3Q13618 768 aa9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 GPC2Q8N158 579 aa9.5□□□□□ -0.89
SPTBN1-207ENST00000615901 ZNF263O14978 683 aa9.49□□□□□ -0.89
SPTBN1-207ENST00000615901 NPM3O75607 178 aaKnown RBP9.49□□□□□ -0.89
SPTBN1-207ENST00000615901 RPSAP08865 295 aaKnown RBP9.49□□□□□ -0.89
SPTBN1-207ENST00000615901 PAEPP09466 180 aa9.49□□□□□ -0.89
SPTBN1-207ENST00000615901 HERVK_113P62684 666 aa9.49□□□□□ -0.89
SPTBN1-207ENST00000615901 BST2Q10589 180 aaKnown RBP9.49□□□□□ -0.89
SPTBN1-207ENST00000615901 ATXN7L3BQ96GX2 97 aa9.49□□□□□ -0.89
SPTBN1-207ENST00000615901 FAM237AA0A1B0GTK4 181 aa9.49□□□□□ -0.89
SPTBN1-207ENST00000615901 CNTFP26441 200 aa9.49□□□□□ -0.89
SPTBN1-207ENST00000615901 PTGER2P43116 358 aa9.49□□□□□ -0.89
SPTBN1-207ENST00000615901 KPNA1P52294 538 aaPredicted RBP9.49□□□□□ -0.89
SPTBN1-207ENST00000615901 PRAMEF18Q5VWM3 479 aa9.49□□□□□ -0.89
SPTBN1-207ENST00000615901 TIGD7Q6NT04 549 aaPredicted RBP9.49□□□□□ -0.89
SPTBN1-207ENST00000615901 ZDHHC17Q8IUH5 632 aa9.49□□□□□ -0.89
SPTBN1-207ENST00000615901 ZNF507Q8TCN5 953 aa9.49□□□□□ -0.89
SPTBN1-207ENST00000615901 MANSC1Q9H8J5 431 aa9.49□□□□□ -0.89
SPTBN1-207ENST00000615901 KLC4Q9NSK0 619 aa9.49□□□□□ -0.89
SPTBN1-207ENST00000615901 GOLGA8TH3BQL2 631 aa9.49□□□□□ -0.89
SPTBN1-207ENST00000615901 HIST1H2AGP0C0S8 130 aaPredicted RBP9.49□□□□□ -0.89
SPTBN1-207ENST00000615901 HIST1H2ADP20671 130 aa9.49□□□□□ -0.89
SPTBN1-207ENST00000615901 THPOP40225 353 aa9.49□□□□□ -0.89
SPTBN1-207ENST00000615901 ST8SIA6P61647 398 aa9.49□□□□□ -0.89
SPTBN1-207ENST00000615901 C10orf120Q5SQS8 335 aa9.49□□□□□ -0.89
SPTBN1-207ENST00000615901 C3orf62Q6ZUJ4 267 aa9.49□□□□□ -0.89
SPTBN1-207ENST00000615901 ANKS3Q6ZW76 656 aa9.49□□□□□ -0.89
SPTBN1-207ENST00000615901 CAVIN3Q969G5 261 aa9.49□□□□□ -0.89
SPTBN1-207ENST00000615901 HIST1H2AHQ96KK5 128 aa9.49□□□□□ -0.89
SPTBN1-207ENST00000615901 HIST1H2AJQ99878 128 aa9.49□□□□□ -0.89
SPTBN1-207ENST00000615901 H2AFJQ9BTM1 129 aa9.49□□□□□ -0.89
SPTBN1-207ENST00000615901 NPHS2Q9NP85 383 aa9.49□□□□□ -0.89
SPTBN1-207ENST00000615901 SDR42E2A6NKP2 422 aa9.49□□□□□ -0.89
SPTBN1-207ENST00000615901 PROSCO94903 275 aa9.49□□□□□ -0.89
SPTBN1-207ENST00000615901 ARHGAP15Q53QZ3 475 aa9.49□□□□□ -0.89
SPTBN1-207ENST00000615901 TRIML2Q8N7C3 387 aa9.49□□□□□ -0.89
SPTBN1-207ENST00000615901 HIPK4Q8NE63 616 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms