RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 ERLEC1Q96DZ1 483 aa6.09□□□□□ -1.43
CPNE3-208ENST00000614678 CHFRQ96EP1 664 aa6.09□□□□□ -1.43
CPNE3-208ENST00000614678 TIGD1Q96MW7 591 aa6.09□□□□□ -1.43
CPNE3-208ENST00000614678 ATXN3LQ9H3M9 355 aa6.09□□□□□ -1.43
CPNE3-208ENST00000614678 HEBP1Q9NRV9 189 aa6.09□□□□□ -1.43
CPNE3-208ENST00000614678 GTSE1Q9NYZ3 720 aa6.09□□□□□ -1.43
CPNE3-208ENST00000614678 CHORDC1Q9UHD1 332 aaPredicted RBP6.09□□□□□ -1.43
CPNE3-208ENST00000614678 FRMD4BQ9Y2L6 1034 aa6.09□□□□□ -1.43
CPNE3-208ENST00000614678 UBE4BO95155 1302 aa6.09□□□□□ -1.43
CPNE3-208ENST00000614678 XPOTO43592 962 aaKnown RBP6.09□□□□□ -1.44
CPNE3-208ENST00000614678 TBX18O95935 607 aa6.09□□□□□ -1.44
CPNE3-208ENST00000614678 ASS1P00966 412 aaKnown RBP6.09□□□□□ -1.44
CPNE3-208ENST00000614678 SRGAP2BP0DMP2 458 aa6.09□□□□□ -1.44
CPNE3-208ENST00000614678 ADORA2BP29275 332 aa6.09□□□□□ -1.44
CPNE3-208ENST00000614678 KLK7P49862 253 aa6.09□□□□□ -1.44
CPNE3-208ENST00000614678 NOP14P78316 857 aaKnown RBP6.09□□□□□ -1.44
CPNE3-208ENST00000614678 KYAT1Q16773 422 aa6.09□□□□□ -1.44
CPNE3-208ENST00000614678 VITQ6UXI7 678 aa6.09□□□□□ -1.44
CPNE3-208ENST00000614678 TRIM67Q6ZTA4 783 aa6.09□□□□□ -1.44
CPNE3-208ENST00000614678 FUKQ8N0W3 1084 aa6.09□□□□□ -1.44
CPNE3-208ENST00000614678 TMEM105Q8N8V8 129 aa6.09□□□□□ -1.44
CPNE3-208ENST00000614678 CMASQ8NFW8 434 aaPredicted RBP6.09□□□□□ -1.44
CPNE3-208ENST00000614678 FAM200AQ8TCP9 573 aa6.09□□□□□ -1.44
CPNE3-208ENST00000614678 RNF38Q9H0F5 515 aa6.09□□□□□ -1.44
CPNE3-208ENST00000614678 CLSTN2Q9H4D0 955 aa6.09□□□□□ -1.44
CPNE3-208ENST00000614678 ZDHHC4Q9NPG8 344 aa6.09□□□□□ -1.44
CPNE3-208ENST00000614678 SSX2IPQ9Y2D8 614 aa6.09□□□□□ -1.44
CPNE3-208ENST00000614678 SPTBN2O15020 2390 aa6.09□□□□□ -1.44
CPNE3-208ENST00000614678 LAMA5O15230 3695 aa6.08□□□□□ -1.44
CPNE3-208ENST00000614678 H7C4K7 107 aa6.08□□□□□ -1.44
CPNE3-208ENST00000614678 CCNE1P24864 410 aa6.08□□□□□ -1.44
CPNE3-208ENST00000614678 PSMC2P35998 433 aaKnown RBP6.08□□□□□ -1.44
CPNE3-208ENST00000614678 PDZD4Q76G19 769 aaPredicted RBP6.08□□□□□ -1.44
CPNE3-208ENST00000614678 ARID3BQ8IVW6 561 aaPredicted RBP6.08□□□□□ -1.44
CPNE3-208ENST00000614678 LMO3Q8TAP4 145 aa6.08□□□□□ -1.44
CPNE3-208ENST00000614678 SLC2A14Q8TDB8 520 aa6.08□□□□□ -1.44
CPNE3-208ENST00000614678 PBXIP1Q96AQ6 731 aa6.08□□□□□ -1.44
CPNE3-208ENST00000614678 ZNF560Q96MR9 790 aa6.08□□□□□ -1.44
CPNE3-208ENST00000614678 OSER1Q9NX31 292 aa6.08□□□□□ -1.44
CPNE3-208ENST00000614678 CDH7Q9ULB5 785 aa6.08□□□□□ -1.44
CPNE3-208ENST00000614678 PIEZO1Q92508 2521 aa6.08□□□□□ -1.44
CPNE3-208ENST00000614678 ZNF292O60281 2723 aa6.08□□□□□ -1.44
CPNE3-208ENST00000614678 GABBR2O75899 941 aa6.08□□□□□ -1.44
CPNE3-208ENST00000614678 MYL1P05976 194 aa6.08□□□□□ -1.44
CPNE3-208ENST00000614678 PTPN2P17706 415 aa6.08□□□□□ -1.44
CPNE3-208ENST00000614678 PTPN1P18031 435 aaKnown RBP6.08□□□□□ -1.44
CPNE3-208ENST00000614678 NUMBP49757 651 aa6.08□□□□□ -1.44
CPNE3-208ENST00000614678 CWF19L1Q69YN2 538 aaKnown RBP6.08□□□□□ -1.44
CPNE3-208ENST00000614678 TXNDC11Q6PKC3 985 aa6.08□□□□□ -1.44
CPNE3-208ENST00000614678 B3GALNT2Q8NCR0 500 aa6.08□□□□□ -1.44
CPNE3-208ENST00000614678 PSMG2Q969U7 264 aa6.08□□□□□ -1.44
CPNE3-208ENST00000614678 SMOQ99835 787 aa6.08□□□□□ -1.44
CPNE3-208ENST00000614678 ACBD6Q9BR61 282 aa6.08□□□□□ -1.44
CPNE3-208ENST00000614678 FBRSL1Q9HCM7 1045 aaKnown RBP6.08□□□□□ -1.44
CPNE3-208ENST00000614678 TMEM221A6NGB7 291 aa6.08□□□□□ -1.44
CPNE3-208ENST00000614678 ANHXE9PGG2 379 aa6.08□□□□□ -1.44
CPNE3-208ENST00000614678 M0R296 226 aa6.08□□□□□ -1.44
CPNE3-208ENST00000614678 MDM4O15151 490 aa6.08□□□□□ -1.44
CPNE3-208ENST00000614678 ABL1P00519 1130 aa6.08□□□□□ -1.44
CPNE3-208ENST00000614678 SLC9A1P19634 815 aa6.08□□□□□ -1.44
CPNE3-208ENST00000614678 GRIK1P39086 918 aa6.08□□□□□ -1.44
CPNE3-208ENST00000614678 TNNC1P63316 161 aa6.08□□□□□ -1.44
CPNE3-208ENST00000614678 MYO1EQ12965 1108 aa6.08□□□□□ -1.44
CPNE3-208ENST00000614678 PUS10Q3MIT2 529 aaKnown RBP6.08□□□□□ -1.44
CPNE3-208ENST00000614678 PPP1R26Q5T8A7 1209 aaPredicted RBP6.08□□□□□ -1.44
CPNE3-208ENST00000614678 ZC3H3Q8IXZ2 948 aaKnown RBP6.08□□□□□ -1.44
CPNE3-208ENST00000614678 TOP6BLQ8N6T0 577 aa6.08□□□□□ -1.44
CPNE3-208ENST00000614678 ZNF512Q96ME7 567 aaPredicted RBP6.08□□□□□ -1.44
CPNE3-208ENST00000614678 ASB16Q96NS5 453 aa6.08□□□□□ -1.44
CPNE3-208ENST00000614678 SMPD4Q9NXE4 827 aa6.08□□□□□ -1.44
CPNE3-208ENST00000614678 OR6C75A6NL08 312 aa6.07□□□□□ -1.44
CPNE3-208ENST00000614678 F11P03951 625 aa6.07□□□□□ -1.44
CPNE3-208ENST00000614678 MAP3K7CLP57077 242 aa6.07□□□□□ -1.44
CPNE3-208ENST00000614678 ZNF667Q5HYK9 610 aa6.07□□□□□ -1.44
CPNE3-208ENST00000614678 GPR158Q5T848 1215 aa6.07□□□□□ -1.44
CPNE3-208ENST00000614678 TPGS2Q68CL5 300 aa6.07□□□□□ -1.44
CPNE3-208ENST00000614678 METTL23Q86XA0 190 aa6.07□□□□□ -1.44
CPNE3-208ENST00000614678 ARL14EPQ8N8R7 260 aaPredicted RBP6.07□□□□□ -1.44
CPNE3-208ENST00000614678 TFAP2BQ92481 460 aa6.07□□□□□ -1.44
CPNE3-208ENST00000614678 NECTIN4Q96NY8 510 aa6.07□□□□□ -1.44
CPNE3-208ENST00000614678 LINC00597Q9H2U6 94 aa6.07□□□□□ -1.44
CPNE3-208ENST00000614678 KIAA1586Q9HCI6 787 aa6.07□□□□□ -1.44
CPNE3-208ENST00000614678 TRPC7Q9HCX4 862 aa6.07□□□□□ -1.44
CPNE3-208ENST00000614678 ASAH2Q9NR71 780 aa6.07□□□□□ -1.44
CPNE3-208ENST00000614678 RBM12Q9NTZ6 932 aaKnown RBP6.07□□□□□ -1.44
CPNE3-208ENST00000614678 TJP2Q9UDY2 1190 aa6.07□□□□□ -1.44
CPNE3-208ENST00000614678 SORCS3Q9UPU3 1222 aa6.07□□□□□ -1.44
CPNE3-208ENST00000614678 MYO18AQ92614 2054 aaKnown RBP6.07□□□□□ -1.44
CPNE3-208ENST00000614678 SLC38A8A6NNN8 435 aa6.07□□□□□ -1.44
CPNE3-208ENST00000614678 CETN3O15182 167 aa6.07□□□□□ -1.44
CPNE3-208ENST00000614678 SMC2O95347 1197 aa6.07□□□□□ -1.44
CPNE3-208ENST00000614678 PAPLNO95428 1278 aa6.07□□□□□ -1.44
CPNE3-208ENST00000614678 HNRNPA1P09651 372 aaKnown RBP eCLIP6.07□□□□□ -1.44
CPNE3-208ENST00000614678 WARSP23381 471 aaKnown RBP6.07□□□□□ -1.44
CPNE3-208ENST00000614678 ALDH1A3P47895 512 aa6.07□□□□□ -1.44
CPNE3-208ENST00000614678 MXI1P50539 228 aa6.07□□□□□ -1.44
CPNE3-208ENST00000614678 FKBP3Q00688 224 aaKnown RBP6.07□□□□□ -1.44
CPNE3-208ENST00000614678 UVSSAQ2YD98 709 aa6.07□□□□□ -1.44
CPNE3-208ENST00000614678 EDRF1Q3B7T1 1238 aa6.07□□□□□ -1.44
CPNE3-208ENST00000614678 TMEM31Q5JXX7 168 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms