RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 BFSP2Q13515 415 aa11.37□□□□□ -0.59
FAM3A-221ENST00000612856 FAM171A1Q5VUB5 890 aa11.37□□□□□ -0.59
FAM3A-221ENST00000612856 C1orf228Q6PIY5 440 aa11.37□□□□□ -0.59
FAM3A-221ENST00000612856 PRRT2Q7Z6L0 340 aaPredicted RBP11.37□□□□□ -0.59
FAM3A-221ENST00000612856 TRIM74Q86UV6 250 aa11.37□□□□□ -0.59
FAM3A-221ENST00000612856 TRIM73Q86UV7 250 aa11.37□□□□□ -0.59
FAM3A-221ENST00000612856 MAP7D3Q8IWC1 876 aa11.37□□□□□ -0.59
FAM3A-221ENST00000612856 DAAM1Q9Y4D1 1078 aa11.37□□□□□ -0.59
FAM3A-221ENST00000612856 BCORQ6W2J9 1755 aa11.37□□□□□ -0.59
FAM3A-221ENST00000612856 ZC3H4Q9UPT8 1303 aaKnown RBP11.37□□□□□ -0.59
FAM3A-221ENST00000612856 POC1B-GALNT4F8VUJ3 575 aa11.37□□□□□ -0.59
FAM3A-221ENST00000612856 CYB561D2O14569 222 aa11.37□□□□□ -0.59
FAM3A-221ENST00000612856 NDC80O14777 642 aa11.37□□□□□ -0.59
FAM3A-221ENST00000612856 RASGRF2O14827 1237 aa11.37□□□□□ -0.59
FAM3A-221ENST00000612856 ALDH3A1P30838 453 aa11.37□□□□□ -0.59
FAM3A-221ENST00000612856 PBX1P40424 430 aa11.37□□□□□ -0.59
FAM3A-221ENST00000612856 NAMPTP43490 491 aa11.37□□□□□ -0.59
FAM3A-221ENST00000612856 KCNT1Q5JUK3 1230 aa11.37□□□□□ -0.59
FAM3A-221ENST00000612856 SDHAF4Q5VUM1 108 aa11.37□□□□□ -0.59
FAM3A-221ENST00000612856 NOP9Q86U38 636 aaKnown RBP11.37□□□□□ -0.59
FAM3A-221ENST00000612856 ZNF784Q8NCA9 323 aaPredicted RBP11.37□□□□□ -0.59
FAM3A-221ENST00000612856 MTMR14Q8NCE2 650 aa11.37□□□□□ -0.59
FAM3A-221ENST00000612856 SEPT8Q92599 483 aa11.37□□□□□ -0.59
FAM3A-221ENST00000612856 EZH1Q92800 747 aaPredicted RBP11.37□□□□□ -0.59
FAM3A-221ENST00000612856 ZNF560Q96MR9 790 aa11.37□□□□□ -0.59
FAM3A-221ENST00000612856 NAP1L3Q99457 506 aaPredicted RBP11.37□□□□□ -0.59
FAM3A-221ENST00000612856 R3HDMLQ9H3Y0 253 aa11.37□□□□□ -0.59
FAM3A-221ENST00000612856 CREBZFQ9NS37 354 aa11.37□□□□□ -0.59
FAM3A-221ENST00000612856 CEP72Q9P209 647 aa11.37□□□□□ -0.59
FAM3A-221ENST00000612856 UBIAD1Q9Y5Z9 338 aa11.37□□□□□ -0.59
FAM3A-221ENST00000612856 FARP2O94887 1054 aaPredicted RBP11.36□□□□□ -0.59
FAM3A-221ENST00000612856 ZBTB48P10074 688 aaPredicted RBP11.36□□□□□ -0.59
FAM3A-221ENST00000612856 SCNN1BP51168 640 aa11.36□□□□□ -0.59
FAM3A-221ENST00000612856 EPHB1P54762 984 aa11.36□□□□□ -0.59
FAM3A-221ENST00000612856 YWHAGP61981 247 aaKnown RBP eCLIP11.36□□□□□ -0.59
FAM3A-221ENST00000612856 GRIK3Q13003 919 aa11.36□□□□□ -0.59
FAM3A-221ENST00000612856 XRCC4Q13426 336 aa11.36□□□□□ -0.59
FAM3A-221ENST00000612856 RNF220Q5VTB9 566 aa11.36□□□□□ -0.59
FAM3A-221ENST00000612856 CENPPQ6IPU0 288 aa11.36□□□□□ -0.59
FAM3A-221ENST00000612856 MPZL3Q6UWV2 235 aa11.36□□□□□ -0.59
FAM3A-221ENST00000612856 BTNL9Q6UXG8 535 aa11.36□□□□□ -0.59
FAM3A-221ENST00000612856 ARHGAP22Q7Z5H3 698 aa11.36□□□□□ -0.59
FAM3A-221ENST00000612856 DNAJC19Q96DA6 116 aa11.36□□□□□ -0.59
FAM3A-221ENST00000612856 KDM4CQ9H3R0 1056 aa11.36□□□□□ -0.59
FAM3A-221ENST00000612856 MRPL47Q9HD33 250 aaKnown RBP11.36□□□□□ -0.59
FAM3A-221ENST00000612856 BZW2Q9Y6E2 419 aaKnown RBP11.36□□□□□ -0.59
FAM3A-221ENST00000612856 NHSQ6T4R5 1651 aa11.36□□□□□ -0.59
FAM3A-221ENST00000612856 SPATA31C1P0DKV0 1188 aa11.36□□□□□ -0.59
FAM3A-221ENST00000612856 CUL1Q13616 776 aa11.36□□□□□ -0.59
FAM3A-221ENST00000612856 VEPH1Q14D04 833 aa11.36□□□□□ -0.59
FAM3A-221ENST00000612856 ZNF564Q8TBZ8 553 aaPredicted RBP11.36□□□□□ -0.59
FAM3A-221ENST00000612856 EDEM1Q92611 657 aa11.36□□□□□ -0.59
FAM3A-221ENST00000612856 P3H4Q92791 437 aa11.36□□□□□ -0.59
FAM3A-221ENST00000612856 MCEEQ96PE7 176 aa11.36□□□□□ -0.59
FAM3A-221ENST00000612856 ARAP2Q8WZ64 1704 aa11.36□□□□□ -0.59
FAM3A-221ENST00000612856 CASZ1Q86V15 1759 aa11.36□□□□□ -0.59
FAM3A-221ENST00000612856 NEMP1O14524 444 aa11.36□□□□□ -0.59
FAM3A-221ENST00000612856 CKMP06732 381 aa11.36□□□□□ -0.59
FAM3A-221ENST00000612856 KRT16P08779 473 aa11.36□□□□□ -0.59
FAM3A-221ENST00000612856 FLT3P36888 993 aa11.36□□□□□ -0.59
FAM3A-221ENST00000612856 IFI35P80217 286 aaPredicted RBP11.36□□□□□ -0.59
FAM3A-221ENST00000612856 SP2Q02086 613 aa11.36□□□□□ -0.59
FAM3A-221ENST00000612856 INPP4AQ96PE3 977 aaPredicted RBP11.36□□□□□ -0.59
FAM3A-221ENST00000612856 PACSIN1Q9BY11 444 aa11.36□□□□□ -0.59
FAM3A-221ENST00000612856 NXF3Q9H4D5 531 aaKnown RBP11.36□□□□□ -0.59
FAM3A-221ENST00000612856 GTF3C4Q9UKN8 822 aa11.36□□□□□ -0.59
FAM3A-221ENST00000612856 ST3GAL5Q9UNP4 418 aa11.36□□□□□ -0.59
FAM3A-221ENST00000612856 KNTC1P50748 2209 aa11.36□□□□□ -0.59
FAM3A-221ENST00000612856 EXTL3O43909 919 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 NPM3O75607 178 aaKnown RBP11.35□□□□□ -0.59
FAM3A-221ENST00000612856 KRT3P12035 628 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 CYP2C18P33260 490 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 SOX5P35711 763 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 CDH6P55285 790 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 BBS9Q3SYG4 887 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 FRMD5Q7Z6J6 570 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 ZNF296Q8WUU4 475 aaPredicted RBP11.35□□□□□ -0.59
FAM3A-221ENST00000612856 C1orf54Q8WWF1 131 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 C18orf8Q96DM3 657 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 TNIP3Q96KP6 325 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 ZNF570Q96NI8 536 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 NT5C1AQ9BXI3 368 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 RAB17Q9H0T7 212 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 CYP4F11Q9HBI6 524 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 SLC12A6Q9UHW9 1150 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 PASKQ96RG2 1323 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 A0A1W2PQC6 194 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 WDR91A4D1P6 747 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 SGPL1O95470 568 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 APLP1P51693 650 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 GALCP54803 685 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 CAPSQ13938 189 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 SGSM1Q2NKQ1 1148 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 ARSHQ5FYA8 562 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 MYLK4Q86YV6 388 aaPredicted RBP11.35□□□□□ -0.59
FAM3A-221ENST00000612856 PALM2Q8IXS6 379 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 C7orf61Q8IZ16 206 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 MCUQ8NE86 351 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 HELQQ8TDG4 1101 aa11.35□□□□□ -0.59
FAM3A-221ENST00000612856 DNAJC9Q8WXX5 260 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms