RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 KPNA7A9QM74 516 aa25.24■■□□□ 1.63
MMP28-203ENST00000612672 PRPF40AO75400 957 aaKnown RBP25.24■■□□□ 1.63
MMP28-203ENST00000612672 PROS1P07225 676 aa25.24■■□□□ 1.63
MMP28-203ENST00000612672 PLCG1P19174 1290 aa25.24■■□□□ 1.63
MMP28-203ENST00000612672 ACAT1P24752 427 aaKnown RBP25.24■■□□□ 1.63
MMP28-203ENST00000612672 CYP2F1P24903 491 aa25.24■■□□□ 1.63
MMP28-203ENST00000612672 ADSSP30520 456 aa25.24■■□□□ 1.63
MMP28-203ENST00000612672 KARSQ15046 597 aaKnown RBP25.24■■□□□ 1.63
MMP28-203ENST00000612672 EML3Q32P44 896 aa25.24■■□□□ 1.63
MMP28-203ENST00000612672 OSTM1Q86WC4 334 aa25.24■■□□□ 1.63
MMP28-203ENST00000612672 PDCL2Q8N4E4 241 aa25.24■■□□□ 1.63
MMP28-203ENST00000612672 MRPS31Q92665 395 aaKnown RBP25.24■■□□□ 1.63
MMP28-203ENST00000612672 ZHX3Q9H4I2 956 aa25.24■■□□□ 1.63
MMP28-203ENST00000612672 AGO2Q9UKV8 859 aaKnown RBP25.24■■□□□ 1.63
MMP28-203ENST00000612672 NOL4O94818 638 aa25.23■■□□□ 1.63
MMP28-203ENST00000612672 APBB3O95704 486 aa25.23■■□□□ 1.63
MMP28-203ENST00000612672 BCKDHBP21953 392 aa25.23■■□□□ 1.63
MMP28-203ENST00000612672 NOVA1P51513 510 aaKnown RBP25.23■■□□□ 1.63
MMP28-203ENST00000612672 SMARCB1Q12824 385 aa25.23■■□□□ 1.63
MMP28-203ENST00000612672 PDGFRLQ15198 375 aa25.23■■□□□ 1.63
MMP28-203ENST00000612672 ARL6IP4Q66PJ3 421 aaKnown RBP25.23■■□□□ 1.63
MMP28-203ENST00000612672 DCP1BQ8IZD4 617 aaKnown RBP25.23■■□□□ 1.63
MMP28-203ENST00000612672 TTC16Q8NEE8 873 aa25.23■■□□□ 1.63
MMP28-203ENST00000612672 OSCP1Q8WVF1 389 aa25.23■■□□□ 1.63
MMP28-203ENST00000612672 RAD54LQ92698 747 aa25.23■■□□□ 1.63
MMP28-203ENST00000612672 CD101Q93033 1021 aa25.23■■□□□ 1.63
MMP28-203ENST00000612672 TMEM121BQ9BXQ6 578 aaPredicted RBP25.23■■□□□ 1.63
MMP28-203ENST00000612672 TPSD1Q9BZJ3 242 aa25.23■■□□□ 1.63
MMP28-203ENST00000612672 TRPC7Q9HCX4 862 aa25.23■■□□□ 1.63
MMP28-203ENST00000612672 EBF1Q9UH73 591 aa25.23■■□□□ 1.63
MMP28-203ENST00000612672 FREM2Q5SZK8 3169 aa25.23■■□□□ 1.63
MMP28-203ENST00000612672 PATE3B3GLJ2 98 aa25.22■■□□□ 1.63
MMP28-203ENST00000612672 CAVIN2O95810 425 aa25.22■■□□□ 1.63
MMP28-203ENST00000612672 CSH1P0DML2 217 aa25.22■■□□□ 1.63
MMP28-203ENST00000612672 CSH2P0DML3 217 aa25.22■■□□□ 1.63
MMP28-203ENST00000612672 SV2CQ496J9 727 aa25.22■■□□□ 1.63
MMP28-203ENST00000612672 CC2D1AQ6P1N0 951 aaPredicted RBP25.22■■□□□ 1.63
MMP28-203ENST00000612672 CPA6Q8N4T0 437 aa25.22■■□□□ 1.63
MMP28-203ENST00000612672 CXorf38Q8TB03 319 aa25.22■■□□□ 1.63
MMP28-203ENST00000612672 DUS2Q9NX74 493 aaKnown RBP25.22■■□□□ 1.63
MMP28-203ENST00000612672 MYOFQ9NZM1 2061 aa25.21■■□□□ 1.63
MMP28-203ENST00000612672 C2orf78A6NCI8 922 aa25.21■■□□□ 1.63
MMP28-203ENST00000612672 POLR2BP30876 1174 aaKnown RBP25.21■■□□□ 1.63
MMP28-203ENST00000612672 ZXDBP98169 803 aa25.21■■□□□ 1.63
MMP28-203ENST00000612672 FAM160A1Q05DH4 1040 aa25.21■■□□□ 1.63
MMP28-203ENST00000612672 KCNA1Q09470 495 aa25.21■■□□□ 1.63
MMP28-203ENST00000612672 ZNF252P-AS1Q0IIN9 211 aa25.21■■□□□ 1.63
MMP28-203ENST00000612672 ELF2Q15723 593 aa25.21■■□□□ 1.63
MMP28-203ENST00000612672 GAB4Q2WGN9 574 aa25.21■■□□□ 1.63
MMP28-203ENST00000612672 FBXO43Q4G163 708 aa25.21■■□□□ 1.63
MMP28-203ENST00000612672 PMS2CLQ68D20 193 aa25.21■■□□□ 1.63
MMP28-203ENST00000612672 UNQ6494/PRO21346Q6UXR6 183 aa25.21■■□□□ 1.63
MMP28-203ENST00000612672 C1orf127Q8N9H9 656 aa25.21■■□□□ 1.63
MMP28-203ENST00000612672 LEO1Q8WVC0 666 aaPredicted RBP25.21■■□□□ 1.63
MMP28-203ENST00000612672 LINC00597Q9H2U6 94 aa25.21■■□□□ 1.63
MMP28-203ENST00000612672 GCNT4Q9P109 453 aa25.21■■□□□ 1.63
MMP28-203ENST00000612672 PPP1R37O75864 691 aa25.2■■□□□ 1.62
MMP28-203ENST00000612672 HOXB3P14651 431 aaPredicted RBP25.2■■□□□ 1.62
MMP28-203ENST00000612672 HNRNPLP14866 589 aaKnown RBP eCLIP25.2■■□□□ 1.62
MMP28-203ENST00000612672 SCP2P22307 547 aa25.2■■□□□ 1.62
MMP28-203ENST00000612672 DGKEP52429 567 aa25.2■■□□□ 1.62
MMP28-203ENST00000612672 TSPY1Q01534 308 aa25.2■■□□□ 1.62
MMP28-203ENST00000612672 PSMD2Q13200 908 aa25.2■■□□□ 1.62
MMP28-203ENST00000612672 INTS6LQ5JSJ4 861 aaKnown RBP25.2■■□□□ 1.62
MMP28-203ENST00000612672 SFTPA1Q8IWL2 248 aa25.2■■□□□ 1.62
MMP28-203ENST00000612672 TRMT2BQ96GJ1 504 aaKnown RBP25.2■■□□□ 1.62
MMP28-203ENST00000612672 MYRFLQ96LU7 910 aa25.2■■□□□ 1.62
MMP28-203ENST00000612672 DDX43Q9NXZ2 648 aaKnown RBP25.2■■□□□ 1.62
MMP28-203ENST00000612672 GTF3C4Q9UKN8 822 aa25.2■■□□□ 1.62
MMP28-203ENST00000612672 ZMIZ1Q9ULJ6 1067 aa25.2■■□□□ 1.62
MMP28-203ENST00000612672 CACNA1EQ15878 2313 aa25.19■■□□□ 1.62
MMP28-203ENST00000612672 SOBPA7XYQ1 873 aa25.19■■□□□ 1.62
MMP28-203ENST00000612672 CDX4O14627 284 aaPredicted RBP25.19■■□□□ 1.62
MMP28-203ENST00000612672 RHOBTB1O94844 696 aa25.19■■□□□ 1.62
MMP28-203ENST00000612672 ITGB3P05106 788 aa25.19■■□□□ 1.62
MMP28-203ENST00000612672 KRT18P05783 430 aaKnown RBP25.19■■□□□ 1.62
MMP28-203ENST00000612672 CHRM1P11229 460 aaPredicted RBP25.19■■□□□ 1.62
MMP28-203ENST00000612672 FOXC1Q12948 553 aa25.19■■□□□ 1.62
MMP28-203ENST00000612672 SH3PXD2AQ5TCZ1 1133 aa25.19■■□□□ 1.62
MMP28-203ENST00000612672 SFR1Q86XK3 245 aa25.19■■□□□ 1.62
MMP28-203ENST00000612672 ARL14EPQ8N8R7 260 aaPredicted RBP25.19■■□□□ 1.62
MMP28-203ENST00000612672 CALML4Q96GE6 196 aa25.19■■□□□ 1.62
MMP28-203ENST00000612672 AK8Q96MA6 479 aa25.19■■□□□ 1.62
MMP28-203ENST00000612672 ZNF560Q96MR9 790 aa25.19■■□□□ 1.62
MMP28-203ENST00000612672 ST6GALNAC4Q9H4F1 302 aa25.19■■□□□ 1.62
MMP28-203ENST00000612672 ITPR1Q14643 2758 aa25.19■■□□□ 1.62
MMP28-203ENST00000612672 K7EQS6 105 aa25.18■■□□□ 1.62
MMP28-203ENST00000612672 TBCAO75347 108 aaKnown RBP25.18■■□□□ 1.62
MMP28-203ENST00000612672 CKMP06732 381 aa25.18■■□□□ 1.62
MMP28-203ENST00000612672 GBP1P32455 592 aa25.18■■□□□ 1.62
MMP28-203ENST00000612672 OPRD1P41143 372 aa25.18■■□□□ 1.62
MMP28-203ENST00000612672 UBA7P41226 1012 aa25.18■■□□□ 1.62
MMP28-203ENST00000612672 IFNAR2P48551 515 aa25.18■■□□□ 1.62
MMP28-203ENST00000612672 SEC13P55735 322 aa25.18■■□□□ 1.62
MMP28-203ENST00000612672 AMPD2Q01433 879 aa25.18■■□□□ 1.62
MMP28-203ENST00000612672 MESP2Q0VG99 397 aa25.18■■□□□ 1.62
MMP28-203ENST00000612672 NFE2Q16621 373 aaPredicted RBP25.18■■□□□ 1.62
MMP28-203ENST00000612672 SH3RF2Q8TEC5 729 aa25.18■■□□□ 1.62
MMP28-203ENST00000612672 USP33Q8TEY7 942 aa25.18■■□□□ 1.62
MMP28-203ENST00000612672 ACDQ96AP0 544 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms