RNA–Protein interactions for RNA: ENST00000611733.4

CLK4-215, Transcript of CDC like kinase 4, humanhuman

TSL 5 BASIC

Gene CLK4, Length 2,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-215ENST00000611733 SMC1AQ14683 1233 aaKnown RBP12.8□□□□□ -0.36
CLK4-215ENST00000611733 SGO2Q562F6 1265 aa12.8□□□□□ -0.36
CLK4-215ENST00000611733 DENND1BQ6P3S1 775 aa12.8□□□□□ -0.36
CLK4-215ENST00000611733 RBM23Q86U06 439 aaKnown RBP12.8□□□□□ -0.36
CLK4-215ENST00000611733 TMEM139Q8IV31 216 aa12.8□□□□□ -0.36
CLK4-215ENST00000611733 PASD1Q8IV76 773 aa12.8□□□□□ -0.36
CLK4-215ENST00000611733 ZNF830Q96NB3 372 aaPredicted RBP12.8□□□□□ -0.36
CLK4-215ENST00000611733 TSPAN16Q9UKR8 245 aa12.8□□□□□ -0.36
CLK4-215ENST00000611733 IRAK3Q9Y616 596 aa12.8□□□□□ -0.36
CLK4-215ENST00000611733 MYO7AQ13402 2215 aa12.8□□□□□ -0.36
CLK4-215ENST00000611733 TULP2O00295 520 aa12.8□□□□□ -0.36
CLK4-215ENST00000611733 SOAT2O75908 522 aa12.8□□□□□ -0.36
CLK4-215ENST00000611733 MICAL2O94851 1124 aa12.8□□□□□ -0.36
CLK4-215ENST00000611733 SEC24AO95486 1093 aa12.8□□□□□ -0.36
CLK4-215ENST00000611733 BDNFP23560 247 aa12.8□□□□□ -0.36
CLK4-215ENST00000611733 EIF4A3P38919 411 aaKnown RBP12.8□□□□□ -0.36
CLK4-215ENST00000611733 RBM10P98175 930 aaKnown RBP12.8□□□□□ -0.36
CLK4-215ENST00000611733 FMO1Q01740 532 aa12.8□□□□□ -0.36
CLK4-215ENST00000611733 CNGA2Q16280 664 aa12.8□□□□□ -0.36
CLK4-215ENST00000611733 MEA1Q16626 185 aa12.8□□□□□ -0.36
CLK4-215ENST00000611733 TTC30AQ86WT1 665 aa12.8□□□□□ -0.36
CLK4-215ENST00000611733 WDTC1Q8N5D0 677 aa12.8□□□□□ -0.36
CLK4-215ENST00000611733 PANX2Q96RD6 677 aa12.8□□□□□ -0.36
CLK4-215ENST00000611733 PPP1R9BQ96SB3 815 aa12.8□□□□□ -0.36
CLK4-215ENST00000611733 AGPAT1Q99943 283 aa12.8□□□□□ -0.36
CLK4-215ENST00000611733 MED10Q9BTT4 135 aa12.8□□□□□ -0.36
CLK4-215ENST00000611733 NUCKS1Q9H1E3 243 aaKnown RBP12.8□□□□□ -0.36
CLK4-215ENST00000611733 NGRNQ9NPE2 291 aaKnown RBP12.8□□□□□ -0.36
CLK4-215ENST00000611733 ABI2Q9NYB9 513 aaPredicted RBP12.8□□□□□ -0.36
CLK4-215ENST00000611733 FNIP2Q9P278 1114 aa12.8□□□□□ -0.36
CLK4-215ENST00000611733 MTMR11A4FU01 709 aa12.79□□□□□ -0.36
CLK4-215ENST00000611733 ABLIM3O94929 683 aa12.79□□□□□ -0.36
CLK4-215ENST00000611733 SERPING1P05155 500 aa12.79□□□□□ -0.36
CLK4-215ENST00000611733 GTF2F1P35269 517 aaKnown RBP eCLIP12.79□□□□□ -0.36
CLK4-215ENST00000611733 GPR15P49685 360 aa12.79□□□□□ -0.36
CLK4-215ENST00000611733 PDE6CP51160 858 aa12.79□□□□□ -0.36
CLK4-215ENST00000611733 BPIFB4P59827 614 aa12.79□□□□□ -0.36
CLK4-215ENST00000611733 CDR2Q01850 454 aa12.79□□□□□ -0.36
CLK4-215ENST00000611733 ADCY1Q08828 1119 aa12.79□□□□□ -0.36
CLK4-215ENST00000611733 RAB33AQ14088 237 aa12.79□□□□□ -0.36
CLK4-215ENST00000611733 GOLGA7BQ2TAP0 167 aa12.79□□□□□ -0.36
CLK4-215ENST00000611733 TDRD12Q587J7 1177 aaKnown RBP12.79□□□□□ -0.36
CLK4-215ENST00000611733 ARHGAP17Q68EM7 881 aa12.79□□□□□ -0.36
CLK4-215ENST00000611733 DCP1BQ8IZD4 617 aaKnown RBP12.79□□□□□ -0.36
CLK4-215ENST00000611733 KCNK16Q96T55 309 aa12.79□□□□□ -0.36
CLK4-215ENST00000611733 HNRNPABQ99729 332 aaKnown RBP12.79□□□□□ -0.36
CLK4-215ENST00000611733 STK39Q9UEW8 545 aa12.79□□□□□ -0.36
CLK4-215ENST00000611733 CYTH4Q9UIA0 394 aa12.79□□□□□ -0.36
CLK4-215ENST00000611733 KIAA1257Q9ULG3 409 aa12.79□□□□□ -0.36
CLK4-215ENST00000611733 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.79□□□□□ -0.36
CLK4-215ENST00000611733 SZT2Q5T011 3432 aa12.79□□□□□ -0.36
CLK4-215ENST00000611733 DDX3XO00571 662 aaKnown RBP eCLIP12.79□□□□□ -0.36
CLK4-215ENST00000611733 TGM5O43548 720 aa12.79□□□□□ -0.36
CLK4-215ENST00000611733 KLRC2P26717 231 aa12.79□□□□□ -0.36
CLK4-215ENST00000611733 DUSP4Q13115 394 aa12.79□□□□□ -0.36
CLK4-215ENST00000611733 ADGRE1Q14246 886 aa12.79□□□□□ -0.36
CLK4-215ENST00000611733 MTF1Q14872 753 aa12.79□□□□□ -0.36
CLK4-215ENST00000611733 TSR1Q2NL82 804 aaKnown RBP12.79□□□□□ -0.36
CLK4-215ENST00000611733 SDHAF4Q5VUM1 108 aa12.79□□□□□ -0.36
CLK4-215ENST00000611733 LCLAT1Q6UWP7 414 aa12.79□□□□□ -0.36
CLK4-215ENST00000611733 FAM35AQ86V20 835 aa12.79□□□□□ -0.36
CLK4-215ENST00000611733 LRRC8AQ8IWT6 810 aa12.79□□□□□ -0.36
CLK4-215ENST00000611733 GPR65Q8IYL9 337 aa12.79□□□□□ -0.36
CLK4-215ENST00000611733 STKLD1Q8NE28 680 aa12.79□□□□□ -0.36
CLK4-215ENST00000611733 ZNF461Q8TAF7 563 aa12.79□□□□□ -0.36
CLK4-215ENST00000611733 SMOQ99835 787 aa12.79□□□□□ -0.36
CLK4-215ENST00000611733 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.79□□□□□ -0.36
CLK4-215ENST00000611733 ADAMTS1Q9UHI8 967 aa12.79□□□□□ -0.36
CLK4-215ENST00000611733 SOWAHDA6NJG2 315 aa12.78□□□□□ -0.36
CLK4-215ENST00000611733 CLASP2O75122 1294 aaKnown RBP12.78□□□□□ -0.36
CLK4-215ENST00000611733 NDUFV1P49821 464 aa12.78□□□□□ -0.36
CLK4-215ENST00000611733 CCDC173Q0VFZ6 552 aa12.78□□□□□ -0.36
CLK4-215ENST00000611733 ASTE1Q2TB18 679 aaPredicted RBP12.78□□□□□ -0.36
CLK4-215ENST00000611733 PKDCCQ504Y2 493 aa12.78□□□□□ -0.36
CLK4-215ENST00000611733 LILRA6Q6PI73 481 aa12.78□□□□□ -0.36
CLK4-215ENST00000611733 Q7L0L9 218 aa12.78□□□□□ -0.36
CLK4-215ENST00000611733 SPATA2LQ8IUW3 424 aaPredicted RBP12.78□□□□□ -0.36
CLK4-215ENST00000611733 ZMIZ2Q8NF64 920 aa12.78□□□□□ -0.36
CLK4-215ENST00000611733 FEZF2Q8TBJ5 459 aa12.78□□□□□ -0.36
CLK4-215ENST00000611733 GPR152Q8TDT2 470 aa12.78□□□□□ -0.36
CLK4-215ENST00000611733 NHEJ1Q9H9Q4 299 aaPredicted RBP12.78□□□□□ -0.36
CLK4-215ENST00000611733 ZNHIT6Q9NWK9 470 aaKnown RBP12.78□□□□□ -0.36
CLK4-215ENST00000611733 TAS2R14Q9NYV8 317 aa12.78□□□□□ -0.36
CLK4-215ENST00000611733 SSX2IPQ9Y2D8 614 aa12.78□□□□□ -0.36
CLK4-215ENST00000611733 TRANK1O15050 2925 aa12.78□□□□□ -0.36
CLK4-215ENST00000611733 A0A087X0T9 212 aa12.77□□□□□ -0.36
CLK4-215ENST00000611733 M0QYV0 167 aa12.77□□□□□ -0.36
CLK4-215ENST00000611733 GABBR2O75899 941 aa12.77□□□□□ -0.36
CLK4-215ENST00000611733 FAM228BP0C875 321 aa12.77□□□□□ -0.36
CLK4-215ENST00000611733 TNFAIP3P21580 790 aa12.77□□□□□ -0.36
CLK4-215ENST00000611733 FECHP22830 423 aa12.77□□□□□ -0.36
CLK4-215ENST00000611733 MAP3K7CLP57077 242 aa12.77□□□□□ -0.36
CLK4-215ENST00000611733 GSDMDP57764 484 aa12.77□□□□□ -0.36
CLK4-215ENST00000611733 PDE4CQ08493 712 aa12.77□□□□□ -0.36
CLK4-215ENST00000611733 DDR2Q16832 855 aa12.77□□□□□ -0.36
CLK4-215ENST00000611733 RAD9BQ6WBX8 426 aa12.77□□□□□ -0.36
CLK4-215ENST00000611733 ANKRD52Q8NB46 1076 aa12.77□□□□□ -0.36
CLK4-215ENST00000611733 SLC30A5Q8TAD4 765 aa12.77□□□□□ -0.36
CLK4-215ENST00000611733 CPA5Q8WXQ8 436 aa12.77□□□□□ -0.36
CLK4-215ENST00000611733 SECISBP2LQ93073 1101 aaKnown RBP12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms