RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 ICAM3P32942 547 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 GRM1Q13255 1194 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 C1orf228Q6PIY5 440 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 POLNQ7Z5Q5 900 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 CCDC125Q86Z20 511 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 FBXO36Q8NEA4 188 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 CFAP61Q8NHU2 1237 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 AFG1LQ8WV93 481 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 COPS5Q92905 334 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 MAFBQ9Y5Q3 323 aaPredicted RBP6.68□□□□□ -1.34
SNX13-213ENST00000611725 APOC4-APOC2K7ER74 178 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 O00370 1275 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 CIB2O75838 187 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 ATP5HO75947 161 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 APOC2P02655 101 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 PTGIRP43119 386 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 ZNF354CQ86Y25 554 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 PDCD7Q8N8D1 485 aaKnown RBP6.68□□□□□ -1.34
SNX13-213ENST00000611725 TMEM176AQ96HP8 235 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 MYCBPQ99417 103 aaPredicted RBP6.68□□□□□ -1.34
SNX13-213ENST00000611725 SYT11Q9BT88 431 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 NIFKQ9BYG3 293 aaKnown RBP6.68□□□□□ -1.34
SNX13-213ENST00000611725 UBN1Q9NPG3 1134 aa6.68□□□□□ -1.34
SNX13-213ENST00000611725 ADARB2Q9NS39 739 aaKnown RBP6.68□□□□□ -1.34
SNX13-213ENST00000611725 UBQLN1Q9UMX0 589 aaKnown RBP6.68□□□□□ -1.34
SNX13-213ENST00000611725 MAP3K6O95382 1288 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 CHKAP35790 457 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 ARL2P36404 184 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 GHRHRQ02643 423 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 PTP4A2Q12974 167 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 PTPN20Q4JDL3 420 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 FUKQ8N0W3 1084 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 KIF2BQ8N4N8 673 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 ZCCHC9Q8N567 271 aaKnown RBP6.67□□□□□ -1.34
SNX13-213ENST00000611725 RXFP2Q8WXD0 754 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 PAFAH2Q99487 392 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 FRMD8P1Q9BZ68 369 aaPredicted RBP6.67□□□□□ -1.34
SNX13-213ENST00000611725 SPON1Q9HCB6 807 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 C10orf71Q711Q0 1435 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 RGPD5Q99666 1765 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 C4BPAP04003 597 aaKnown RBP6.67□□□□□ -1.34
SNX13-213ENST00000611725 HMGCRP04035 888 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 ESRRAP11474 423 aaPredicted RBP6.67□□□□□ -1.34
SNX13-213ENST00000611725 ECHS1P30084 290 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 MIPP30301 263 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 GEMIN4P57678 1058 aaKnown RBP6.67□□□□□ -1.34
SNX13-213ENST00000611725 LMNTD2Q8IXW0 634 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.67□□□□□ -1.34
SNX13-213ENST00000611725 ATXN2LQ8WWM7 1075 aaKnown RBP6.67□□□□□ -1.34
SNX13-213ENST00000611725 CFAP36Q96G28 342 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 GPATCH2LQ9NWQ4 482 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 PIN4Q9Y237 131 aaKnown RBP6.67□□□□□ -1.34
SNX13-213ENST00000611725 DRG1Q9Y295 367 aaKnown RBP6.67□□□□□ -1.34
SNX13-213ENST00000611725 ADM5C9JUS6 153 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 KCNN4O15554 427 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 CST3P01034 146 aaPredicted RBP6.67□□□□□ -1.34
SNX13-213ENST00000611725 RARBP10826 455 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 DRD4P21917 467 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 ENPEPQ07075 957 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 ACOT1Q86TX2 421 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 NKD2Q969F2 451 aaPredicted RBP6.67□□□□□ -1.34
SNX13-213ENST00000611725 XPO7Q9UIA9 1087 aaKnown RBP6.67□□□□□ -1.34
SNX13-213ENST00000611725 ACTL7BQ9Y614 415 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 TRIM49D1C9J1S8 452 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 H0Y3Z8 333 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 H0YGN5 161 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 LIASO43766 372 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 UBOX5O94941 541 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 SETSIPP0DME0 302 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 KRT4P19013 534 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 SSTR1P30872 391 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 CDC42EP1Q00587 391 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 TMEM62Q0P6H9 643 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 RCN2Q14257 317 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 CNGA2Q16280 664 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 CYP1B1Q16678 543 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 GLRA4Q5JXX5 417 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 FAXCQ5TGI0 409 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 MON1BQ7L1V2 547 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 WDR75Q8IWA0 830 aaKnown RBP6.67□□□□□ -1.34
SNX13-213ENST00000611725 PLCD3Q8N3E9 789 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 PIK3R5Q8WYR1 880 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 SAE1Q9UBE0 346 aaPredicted RBP6.67□□□□□ -1.34
SNX13-213ENST00000611725 PPARGC1AQ9UBK2 798 aaKnown RBP6.67□□□□□ -1.34
SNX13-213ENST00000611725 NFS1Q9Y697 457 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 APOL1O14791 398 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 PDGFRBP09619 1106 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 CYP2C8P10632 490 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 ATICP31939 592 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 PTK7Q13308 1070 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 ITIH4Q14624 930 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 ATG16L1Q676U5 607 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 DPY19L2P1Q6NXN4 242 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 RSPH3Q86UC2 560 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 SLITRK1Q96PX8 696 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 XAB2Q9HCS7 855 aaKnown RBP6.67□□□□□ -1.34
SNX13-213ENST00000611725 CPSF3Q9UKF6 684 aaKnown RBP6.67□□□□□ -1.34
SNX13-213ENST00000611725 TSPAN16Q9UKR8 245 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 TJP1Q07157 1748 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 ATXN2Q99700 1313 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms