RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 ESRRAP11474 423 aaPredicted RBP21.42■■□□□ 1.02
SSBP3-216ENST00000610401 VCPP55072 806 aaKnown RBP21.42■■□□□ 1.02
SSBP3-216ENST00000610401 SHKBP1Q8TBC3 707 aa21.42■■□□□ 1.02
SSBP3-216ENST00000610401 FAM151AQ8WW52 585 aa21.42■■□□□ 1.02
SSBP3-216ENST00000610401 TFAP2BQ92481 460 aa21.42■■□□□ 1.02
SSBP3-216ENST00000610401 SERAC1Q96JX3 654 aa21.42■■□□□ 1.02
SSBP3-216ENST00000610401 ACAP3Q96P50 834 aa21.42■■□□□ 1.02
SSBP3-216ENST00000610401 IMPG2Q9BZV3 1241 aa21.42■■□□□ 1.02
SSBP3-216ENST00000610401 IP6K2Q9UHH9 426 aa21.42■■□□□ 1.02
SSBP3-216ENST00000610401 E5RJQ4 531 aa21.42■■□□□ 1.02
SSBP3-216ENST00000610401 TYROBPO43914 113 aa21.42■■□□□ 1.02
SSBP3-216ENST00000610401 KBTBD12Q3ZCT8 623 aa21.42■■□□□ 1.02
SSBP3-216ENST00000610401 ACSBG2Q5FVE4 666 aa21.42■■□□□ 1.02
SSBP3-216ENST00000610401 TFDP3Q5H9I0 405 aa21.42■■□□□ 1.02
SSBP3-216ENST00000610401 SNX30Q5VWJ9 437 aa21.42■■□□□ 1.02
SSBP3-216ENST00000610401 CPT1BQ92523 772 aa21.42■■□□□ 1.02
SSBP3-216ENST00000610401 WDR83Q9BRX9 315 aaKnown RBP21.42■■□□□ 1.02
SSBP3-216ENST00000610401 RPAP3Q9H6T3 665 aaPredicted RBP21.42■■□□□ 1.02
SSBP3-216ENST00000610401 CYP26B1Q9NR63 512 aa21.42■■□□□ 1.02
SSBP3-216ENST00000610401 SLC9A2Q9UBY0 812 aa21.42■■□□□ 1.02
SSBP3-216ENST00000610401 GJB1P08034 283 aa21.41■■□□□ 1.02
SSBP3-216ENST00000610401 GNAZP19086 355 aa21.41■■□□□ 1.02
SSBP3-216ENST00000610401 RPL22P35268 128 aaKnown RBP21.41■■□□□ 1.02
SSBP3-216ENST00000610401 ELK3P41970 407 aa21.41■■□□□ 1.02
SSBP3-216ENST00000610401 PTGER2P43116 358 aa21.41■■□□□ 1.02
SSBP3-216ENST00000610401 BPIFB4P59827 614 aa21.41■■□□□ 1.02
SSBP3-216ENST00000610401 LMNTD2Q8IXW0 634 aa21.41■■□□□ 1.02
SSBP3-216ENST00000610401 RCOR2Q8IZ40 523 aa21.41■■□□□ 1.02
SSBP3-216ENST00000610401 BATF3Q9NR55 127 aa21.41■■□□□ 1.02
SSBP3-216ENST00000610401 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.41■■□□□ 1.02
SSBP3-216ENST00000610401 HEY1Q9Y5J3 304 aa21.41■■□□□ 1.02
SSBP3-216ENST00000610401 EXTL3O43909 919 aa21.41■■□□□ 1.02
SSBP3-216ENST00000610401 APBA3O96018 575 aa21.41■■□□□ 1.02
SSBP3-216ENST00000610401 MUTP22033 750 aa21.41■■□□□ 1.02
SSBP3-216ENST00000610401 MCF2L2Q86YR7 1114 aa21.41■■□□□ 1.02
SSBP3-216ENST00000610401 EFCAB3Q8N7B9 438 aa21.41■■□□□ 1.02
SSBP3-216ENST00000610401 KCTD6Q8NC69 237 aa21.41■■□□□ 1.02
SSBP3-216ENST00000610401 ZNF483Q8TF39 744 aaPredicted RBP21.41■■□□□ 1.02
SSBP3-216ENST00000610401 TRIM11Q96F44 468 aa21.41■■□□□ 1.02
SSBP3-216ENST00000610401 TRIM55Q9BYV6 548 aa21.41■■□□□ 1.02
SSBP3-216ENST00000610401 IQCGQ9H095 443 aaKnown RBP21.41■■□□□ 1.02
SSBP3-216ENST00000610401 hCG_1818297A0A087WSY0 165 aa21.4■■□□□ 1.02
SSBP3-216ENST00000610401 AP1G2O75843 785 aa21.4■■□□□ 1.02
SSBP3-216ENST00000610401 PTK7Q13308 1070 aa21.4■■□□□ 1.02
SSBP3-216ENST00000610401 SCYL2Q6P3W7 929 aa21.4■■□□□ 1.02
SSBP3-216ENST00000610401 KCTD17Q8N5Z5 321 aa21.4■■□□□ 1.02
SSBP3-216ENST00000610401 SCG3Q8WXD2 468 aaKnown RBP21.4■■□□□ 1.02
SSBP3-216ENST00000610401 JDP2Q8WYK2 163 aa21.4■■□□□ 1.02
SSBP3-216ENST00000610401 STMN2Q93045 179 aa21.4■■□□□ 1.02
SSBP3-216ENST00000610401 RBM41Q96IZ5 413 aaKnown RBP21.4■■□□□ 1.02
SSBP3-216ENST00000610401 SIPA1L1O43166 1804 aa21.4■■□□□ 1.02
SSBP3-216ENST00000610401 MEI4A8MW99 385 aa21.4■■□□□ 1.02
SSBP3-216ENST00000610401 UGT1A9O60656 530 aa21.4■■□□□ 1.02
SSBP3-216ENST00000610401 ITGBL1O95965 494 aaPredicted RBP21.4■■□□□ 1.02
SSBP3-216ENST00000610401 F7P08709 466 aaPredicted RBP21.4■■□□□ 1.02
SSBP3-216ENST00000610401 AMPD1P23109 780 aa21.4■■□□□ 1.02
SSBP3-216ENST00000610401 PTPN4P29074 926 aa21.4■■□□□ 1.02
SSBP3-216ENST00000610401 SNRNP48Q6IEG0 339 aaKnown RBP21.4■■□□□ 1.02
SSBP3-216ENST00000610401 PLEKHA7Q6IQ23 1121 aa21.4■■□□□ 1.02
SSBP3-216ENST00000610401 PRPF39Q86UA1 669 aaKnown RBP21.4■■□□□ 1.02
SSBP3-216ENST00000610401 KIAA0319LQ8IZA0 1049 aa21.4■■□□□ 1.02
SSBP3-216ENST00000610401 UGT1A7Q9HAW7 530 aa21.4■■□□□ 1.02
SSBP3-216ENST00000610401 UGT1A10Q9HAW8 530 aa21.4■■□□□ 1.02
SSBP3-216ENST00000610401 UGT1A8Q9HAW9 530 aa21.4■■□□□ 1.02
SSBP3-216ENST00000610401 GPATCH2LQ9NWQ4 482 aa21.4■■□□□ 1.02
SSBP3-216ENST00000610401 PPARGC1AQ9UBK2 798 aaKnown RBP21.4■■□□□ 1.02
SSBP3-216ENST00000610401 POLIQ9UNA4 740 aa21.4■■□□□ 1.02
SSBP3-216ENST00000610401 SMG5Q9UPR3 1016 aaKnown RBP21.4■■□□□ 1.02
SSBP3-216ENST00000610401 SCINQ9Y6U3 715 aa21.4■■□□□ 1.02
SSBP3-216ENST00000610401 TMEM191CA6NGB0 347 aa21.4■■□□□ 1.02
SSBP3-216ENST00000610401 NVLO15381 856 aaKnown RBP21.4■■□□□ 1.02
SSBP3-216ENST00000610401 USP1O94782 785 aa21.4■■□□□ 1.02
SSBP3-216ENST00000610401 TMEM191BP0C7N4 346 aa21.4■■□□□ 1.02
SSBP3-216ENST00000610401 ACTR2P61160 394 aa21.4■■□□□ 1.02
SSBP3-216ENST00000610401 ACVR2BQ13705 512 aa21.4■■□□□ 1.02
SSBP3-216ENST00000610401 CEP120Q8N960 986 aa21.4■■□□□ 1.02
SSBP3-216ENST00000610401 NRG4Q8WWG1 115 aa21.4■■□□□ 1.02
SSBP3-216ENST00000610401 RILPQ96NA2 401 aa21.4■■□□□ 1.02
SSBP3-216ENST00000610401 NMUR2Q9GZQ4 415 aa21.4■■□□□ 1.02
SSBP3-216ENST00000610401 TCEA3O75764 348 aa21.39■■□□□ 1.02
SSBP3-216ENST00000610401 STAM2O75886 525 aa21.39■■□□□ 1.02
SSBP3-216ENST00000610401 ASNSP08243 561 aa21.39■■□□□ 1.02
SSBP3-216ENST00000610401 JAK3P52333 1124 aa21.39■■□□□ 1.02
SSBP3-216ENST00000610401 ALDH18A1P54886 795 aaKnown RBP21.39■■□□□ 1.02
SSBP3-216ENST00000610401 KRT76Q01546 638 aa21.39■■□□□ 1.02
SSBP3-216ENST00000610401 EMC2Q15006 297 aa21.39■■□□□ 1.02
SSBP3-216ENST00000610401 CDHR3Q6ZTQ4 885 aa21.39■■□□□ 1.02
SSBP3-216ENST00000610401 TTLL6Q8N841 843 aa21.39■■□□□ 1.02
SSBP3-216ENST00000610401 KBTBD13C9JR72 458 aa21.39■■□□□ 1.01
SSBP3-216ENST00000610401 ALOX15BO15296 676 aa21.39■■□□□ 1.01
SSBP3-216ENST00000610401 INHBAP08476 426 aa21.39■■□□□ 1.01
SSBP3-216ENST00000610401 ARL4CP56559 192 aa21.39■■□□□ 1.01
SSBP3-216ENST00000610401 TSNAXIP1Q2TAA8 658 aa21.39■■□□□ 1.01
SSBP3-216ENST00000610401 JPH1Q9HDC5 661 aaPredicted RBP21.39■■□□□ 1.01
SSBP3-216ENST00000610401 CISHQ9NSE2 258 aa21.39■■□□□ 1.01
SSBP3-216ENST00000610401 CDKN2BP42772 138 aa21.38■■□□□ 1.01
SSBP3-216ENST00000610401 PTP4A2Q12974 167 aa21.38■■□□□ 1.01
SSBP3-216ENST00000610401 BIRC2Q13490 618 aa21.38■■□□□ 1.01
SSBP3-216ENST00000610401 BSPRYQ5W0U4 402 aa21.38■■□□□ 1.01
SSBP3-216ENST00000610401 DENND1BQ6P3S1 775 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms