RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 ATP1A2P50993 1020 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 NDST1P52848 882 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 MFSD10Q14728 455 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 TAZQ16635 292 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 MFSD5Q6N075 450 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 GSTA5Q7RTV2 222 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 TLK2Q86UE8 772 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 UNC93AQ86WB7 457 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 NME8Q8N427 588 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 BCAS4Q8TDM0 211 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 KAT2BQ92831 832 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 TWNKQ96RR1 684 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 EPN3Q9H201 632 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 CNTN3Q9P232 1028 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 BCCIPQ9P287 314 aaKnown RBP eCLIP12.59□□□□□ -0.39
USP6NL-206ENST00000609853 CYTH4Q9UIA0 394 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 NOVA2Q9UNW9 492 aaKnown RBP12.59□□□□□ -0.39
USP6NL-206ENST00000609853 LRRD1A4D1F6 860 aa12.58□□□□□ -0.4
USP6NL-206ENST00000609853 GOLGA8SH3BPF8 625 aa12.58□□□□□ -0.4
USP6NL-206ENST00000609853 RGS16O15492 202 aaPredicted RBP12.58□□□□□ -0.4
USP6NL-206ENST00000609853 LRCH4O75427 683 aa12.58□□□□□ -0.4
USP6NL-206ENST00000609853 CD4P01730 458 aa12.58□□□□□ -0.4
USP6NL-206ENST00000609853 ZNF865P0CJ78 1059 aaPredicted RBP12.58□□□□□ -0.4
USP6NL-206ENST00000609853 GNAT1P11488 350 aa12.58□□□□□ -0.4
USP6NL-206ENST00000609853 KLRC2P26717 231 aa12.58□□□□□ -0.4
USP6NL-206ENST00000609853 RDXP35241 583 aaKnown RBP12.58□□□□□ -0.4
USP6NL-206ENST00000609853 ITGA8P53708 1063 aa12.58□□□□□ -0.4
USP6NL-206ENST00000609853 INHBEP58166 350 aa12.58□□□□□ -0.4
USP6NL-206ENST00000609853 MAGOHP61326 146 aaKnown RBP12.58□□□□□ -0.4
USP6NL-206ENST00000609853 ADAM17P78536 824 aa12.58□□□□□ -0.4
USP6NL-206ENST00000609853 SLC25A11Q02978 314 aaKnown RBP12.58□□□□□ -0.4
USP6NL-206ENST00000609853 LLGL1Q15334 1064 aa12.58□□□□□ -0.4
USP6NL-206ENST00000609853 ALKAL1Q6UXT8 129 aa12.58□□□□□ -0.4
USP6NL-206ENST00000609853 SPATS2Q86XZ4 545 aaKnown RBP12.58□□□□□ -0.4
USP6NL-206ENST00000609853 USP6NLQ92738 828 aa12.58□□□□□ -0.4
USP6NL-206ENST00000609853 CENPTQ96BT3 561 aa12.58□□□□□ -0.4
USP6NL-206ENST00000609853 FAM107BQ9H098 131 aa12.58□□□□□ -0.4
USP6NL-206ENST00000609853 FAM49AQ9H0Q0 323 aaPredicted RBP12.58□□□□□ -0.4
USP6NL-206ENST00000609853 AP5M1Q9H0R1 490 aa12.58□□□□□ -0.4
USP6NL-206ENST00000609853 SLC12A6Q9UHW9 1150 aa12.58□□□□□ -0.4
USP6NL-206ENST00000609853 CPA4Q9UI42 421 aa12.58□□□□□ -0.4
USP6NL-206ENST00000609853 UBQLN1Q9UMX0 589 aaKnown RBP12.58□□□□□ -0.4
USP6NL-206ENST00000609853 ADCY6O43306 1168 aa12.57□□□□□ -0.4
USP6NL-206ENST00000609853 TCEA3O75764 348 aa12.57□□□□□ -0.4
USP6NL-206ENST00000609853 TTC4O95801 387 aa12.57□□□□□ -0.4
USP6NL-206ENST00000609853 ERBB2P04626 1255 aa12.57□□□□□ -0.4
USP6NL-206ENST00000609853 DESP17661 470 aa12.57□□□□□ -0.4
USP6NL-206ENST00000609853 ATP5DP30049 168 aa12.57□□□□□ -0.4
USP6NL-206ENST00000609853 HPDP32754 393 aaPredicted RBP12.57□□□□□ -0.4
USP6NL-206ENST00000609853 RGS2P41220 211 aa12.57□□□□□ -0.4
USP6NL-206ENST00000609853 PNPLA4P41247 253 aa12.57□□□□□ -0.4
USP6NL-206ENST00000609853 PSEN2P49810 448 aa12.57□□□□□ -0.4
USP6NL-206ENST00000609853 ZNF143P52747 638 aaPredicted RBP12.57□□□□□ -0.4
USP6NL-206ENST00000609853 VCPP55072 806 aaKnown RBP12.57□□□□□ -0.4
USP6NL-206ENST00000609853 HUNKP57058 714 aa12.57□□□□□ -0.4
USP6NL-206ENST00000609853 ATP13A4Q4VNC1 1196 aa12.57□□□□□ -0.4
USP6NL-206ENST00000609853 ZDHHC17Q8IUH5 632 aa12.57□□□□□ -0.4
USP6NL-206ENST00000609853 ALLCQ8N6M5 410 aa12.57□□□□□ -0.4
USP6NL-206ENST00000609853 CMASQ8NFW8 434 aaPredicted RBP12.57□□□□□ -0.4
USP6NL-206ENST00000609853 STK32AQ8WU08 396 aa12.57□□□□□ -0.4
USP6NL-206ENST00000609853 SOCS4Q8WXH5 440 aa12.57□□□□□ -0.4
USP6NL-206ENST00000609853 RAPGEF5Q92565 580 aa12.57□□□□□ -0.4
USP6NL-206ENST00000609853 SERPINB12Q96P63 405 aa12.57□□□□□ -0.4
USP6NL-206ENST00000609853 CNPY3Q9BT09 278 aa12.57□□□□□ -0.4
USP6NL-206ENST00000609853 TRIM6Q9C030 488 aaPredicted RBP12.57□□□□□ -0.4
USP6NL-206ENST00000609853 AAASQ9NRG9 546 aa12.57□□□□□ -0.4
USP6NL-206ENST00000609853 SNTG2Q9NY99 539 aa12.57□□□□□ -0.4
USP6NL-206ENST00000609853 HMGXB4Q9UGU5 601 aa12.57□□□□□ -0.4
USP6NL-206ENST00000609853 ZNF148Q9UQR1 794 aa12.57□□□□□ -0.4
USP6NL-206ENST00000609853 SCN1AP35498 2009 aa12.57□□□□□ -0.4
USP6NL-206ENST00000609853 C3orf70A6NLC5 250 aaPredicted RBP12.57□□□□□ -0.4
USP6NL-206ENST00000609853 PI4K2BG5E9Z4 385 aa12.57□□□□□ -0.4
USP6NL-206ENST00000609853 EBAG9O00559 213 aa12.57□□□□□ -0.4
USP6NL-206ENST00000609853 RASGRF2O14827 1237 aa12.57□□□□□ -0.4
USP6NL-206ENST00000609853 KPNA6O60684 536 aa12.57□□□□□ -0.4
USP6NL-206ENST00000609853 CAND2O75155 1236 aa12.57□□□□□ -0.4
USP6NL-206ENST00000609853 SHBGP04278 402 aa12.57□□□□□ -0.4
USP6NL-206ENST00000609853 KRT10P13645 584 aa12.57□□□□□ -0.4
USP6NL-206ENST00000609853 TCF4P15884 667 aa12.57□□□□□ -0.4
USP6NL-206ENST00000609853 GUCY1A3Q02108 690 aa12.57□□□□□ -0.4
USP6NL-206ENST00000609853 TAF1CQ15572 869 aaPredicted RBP12.57□□□□□ -0.4
USP6NL-206ENST00000609853 OASLQ15646 514 aaKnown RBP12.57□□□□□ -0.4
USP6NL-206ENST00000609853 PTGISQ16647 500 aa12.57□□□□□ -0.4
USP6NL-206ENST00000609853 KAZNQ674X7 775 aa12.57□□□□□ -0.4
USP6NL-206ENST00000609853 BBS12Q6ZW61 710 aa12.57□□□□□ -0.4
USP6NL-206ENST00000609853 B4GALNT4Q76KP1 1039 aa12.57□□□□□ -0.4
USP6NL-206ENST00000609853 TAOK1Q7L7X3 1001 aa12.57□□□□□ -0.4
USP6NL-206ENST00000609853 ANKS1BQ7Z6G8 1248 aa12.57□□□□□ -0.4
USP6NL-206ENST00000609853 PCGF5Q86SE9 256 aa12.57□□□□□ -0.4
USP6NL-206ENST00000609853 CCDC25Q86WR0 208 aa12.57□□□□□ -0.4
USP6NL-206ENST00000609853 ZCCHC9Q8N567 271 aaKnown RBP12.57□□□□□ -0.4
USP6NL-206ENST00000609853 JOSD2Q8TAC2 188 aa12.57□□□□□ -0.4
USP6NL-206ENST00000609853 CDC42EP4Q9H3Q1 356 aaKnown RBP12.57□□□□□ -0.4
USP6NL-206ENST00000609853 RRAGCQ9HB90 399 aa12.57□□□□□ -0.4
USP6NL-206ENST00000609853 CYLDQ9NQC7 956 aa12.57□□□□□ -0.4
USP6NL-206ENST00000609853 METTL5Q9NRN9 209 aaKnown RBP12.57□□□□□ -0.4
USP6NL-206ENST00000609853 TSPAN16Q9UKR8 245 aa12.57□□□□□ -0.4
USP6NL-206ENST00000609853 DNPEPQ9ULA0 475 aa12.57□□□□□ -0.4
USP6NL-206ENST00000609853 SMAPO00193 183 aa12.56□□□□□ -0.4
USP6NL-206ENST00000609853 NDUFAB1O14561 156 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms