RNA–Protein interactions for RNA: ENST00000603633.2

LINC00221-201, long intergenic non-protein coding RNA 221, humanhuman

TSL 2 BASIC

Gene LINC00221, Length 1,656 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00221-201ENST00000603633 USP15Q9Y4E8 981 aaPredicted RBP16.68■□□□□ 0.26
LINC00221-201ENST00000603633 ANK1P16157 1881 aa16.67■□□□□ 0.26
LINC00221-201ENST00000603633 TRIM66O15016 1216 aa16.67■□□□□ 0.26
LINC00221-201ENST00000603633 SERPINC1P01008 464 aa16.67■□□□□ 0.26
LINC00221-201ENST00000603633 PTPN2P17706 415 aa16.67■□□□□ 0.26
LINC00221-201ENST00000603633 CBX2Q14781 532 aaPredicted RBP16.67■□□□□ 0.26
LINC00221-201ENST00000603633 SMAD2Q15796 467 aaKnown RBP16.67■□□□□ 0.26
LINC00221-201ENST00000603633 ARHGEF19Q8IW93 802 aa16.67■□□□□ 0.26
LINC00221-201ENST00000603633 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.67■□□□□ 0.26
LINC00221-201ENST00000603633 WHAMMQ8TF30 809 aa16.67■□□□□ 0.26
LINC00221-201ENST00000603633 HEXIM2Q96MH2 286 aaKnown RBP16.67■□□□□ 0.26
LINC00221-201ENST00000603633 MED10Q9BTT4 135 aa16.67■□□□□ 0.26
LINC00221-201ENST00000603633 CRISPLD1Q9H336 500 aa16.67■□□□□ 0.26
LINC00221-201ENST00000603633 PLCB1Q9NQ66 1216 aa16.67■□□□□ 0.26
LINC00221-201ENST00000603633 PCDHB4Q9Y5E5 795 aa16.67■□□□□ 0.26
LINC00221-201ENST00000603633 TRIP11Q15643 1979 aa16.67■□□□□ 0.26
LINC00221-201ENST00000603633 PAEPP09466 180 aa16.66■□□□□ 0.26
LINC00221-201ENST00000603633 ACO1P21399 889 aaKnown RBP16.66■□□□□ 0.26
LINC00221-201ENST00000603633 CYP2F1P24903 491 aa16.66■□□□□ 0.26
LINC00221-201ENST00000603633 GRIK1P39086 918 aa16.66■□□□□ 0.26
LINC00221-201ENST00000603633 KCNMA1Q12791 1236 aa16.66■□□□□ 0.26
LINC00221-201ENST00000603633 ZNF394Q53GI3 561 aa16.66■□□□□ 0.26
LINC00221-201ENST00000603633 TMEM270Q6UE05 265 aa16.66■□□□□ 0.26
LINC00221-201ENST00000603633 APTXQ7Z2E3 356 aaKnown RBP16.66■□□□□ 0.26
LINC00221-201ENST00000603633 UBR7Q8N806 425 aa16.66■□□□□ 0.26
LINC00221-201ENST00000603633 SMARCD1Q96GM5 515 aa16.66■□□□□ 0.26
LINC00221-201ENST00000603633 HNRNPABQ99729 332 aaKnown RBP16.66■□□□□ 0.26
LINC00221-201ENST00000603633 B3GNT5Q9BYG0 378 aa16.66■□□□□ 0.26
LINC00221-201ENST00000603633 WDR6Q9NNW5 1121 aaKnown RBP16.66■□□□□ 0.26
LINC00221-201ENST00000603633 EHD2Q9NZN4 543 aa16.66■□□□□ 0.26
LINC00221-201ENST00000603633 HMGXB4Q9UGU5 601 aa16.66■□□□□ 0.26
LINC00221-201ENST00000603633 MYO7AQ13402 2215 aa16.66■□□□□ 0.26
LINC00221-201ENST00000603633 FGF19O95750 216 aa16.65■□□□□ 0.26
LINC00221-201ENST00000603633 BDNFP23560 247 aa16.65■□□□□ 0.26
LINC00221-201ENST00000603633 ANXA13P27216 316 aa16.65■□□□□ 0.26
LINC00221-201ENST00000603633 RAD23BP54727 409 aa16.65■□□□□ 0.26
LINC00221-201ENST00000603633 TAF12Q16514 161 aa16.65■□□□□ 0.26
LINC00221-201ENST00000603633 KLHDC7AQ5VTJ3 777 aa16.65■□□□□ 0.26
LINC00221-201ENST00000603633 PSMG2Q969U7 264 aa16.65■□□□□ 0.26
LINC00221-201ENST00000603633 CYFIP2Q96F07 1278 aa16.65■□□□□ 0.26
LINC00221-201ENST00000603633 KREMEN1Q96MU8 473 aa16.65■□□□□ 0.26
LINC00221-201ENST00000603633 ERGIC2Q96RQ1 377 aa16.65■□□□□ 0.26
LINC00221-201ENST00000603633 TWNKQ96RR1 684 aa16.65■□□□□ 0.26
LINC00221-201ENST00000603633 RTN4Q9NQC3 1192 aaKnown RBP16.65■□□□□ 0.26
LINC00221-201ENST00000603633 AVENQ9NQS1 362 aaPredicted RBP16.65■□□□□ 0.26
LINC00221-201ENST00000603633 PRKAG3Q9UGI9 489 aa16.65■□□□□ 0.26
LINC00221-201ENST00000603633 CNTN6Q9UQ52 1028 aa16.65■□□□□ 0.26
LINC00221-201ENST00000603633 ZNF197O14709 1029 aa16.65■□□□□ 0.26
LINC00221-201ENST00000603633 CSH1P0DML2 217 aa16.65■□□□□ 0.26
LINC00221-201ENST00000603633 CSH2P0DML3 217 aa16.65■□□□□ 0.26
LINC00221-201ENST00000603633 VDRP11473 427 aa16.65■□□□□ 0.26
LINC00221-201ENST00000603633 STILQ15468 1287 aa16.65■□□□□ 0.26
LINC00221-201ENST00000603633 CYP4A22Q5TCH4 519 aa16.65■□□□□ 0.26
LINC00221-201ENST00000603633 SCN4BQ8IWT1 228 aa16.65■□□□□ 0.26
LINC00221-201ENST00000603633 TTC9BQ8N6N2 239 aa16.65■□□□□ 0.26
LINC00221-201ENST00000603633 C12orf29Q8N999 325 aa16.65■□□□□ 0.26
LINC00221-201ENST00000603633 SLC4A11Q8NBS3 891 aa16.65■□□□□ 0.26
LINC00221-201ENST00000603633 SLC2A14Q8TDB8 520 aa16.65■□□□□ 0.26
LINC00221-201ENST00000603633 SPATA17Q96L03 361 aa16.65■□□□□ 0.26
LINC00221-201ENST00000603633 C8orf48Q96LL4 319 aa16.65■□□□□ 0.26
LINC00221-201ENST00000603633 PCMTD1Q96MG8 357 aaPredicted RBP16.65■□□□□ 0.26
LINC00221-201ENST00000603633 PHF7Q9BWX1 381 aaPredicted RBP16.65■□□□□ 0.26
LINC00221-201ENST00000603633 LSM14BQ9BX40 385 aaKnown RBP16.65■□□□□ 0.26
LINC00221-201ENST00000603633 DNAJC12Q9UKB3 198 aa16.65■□□□□ 0.26
LINC00221-201ENST00000603633 SCN1AP35498 2009 aa16.65■□□□□ 0.26
LINC00221-201ENST00000603633 TPM3P06753 285 aa16.64■□□□□ 0.25
LINC00221-201ENST00000603633 FAM200BP0CF97 657 aa16.64■□□□□ 0.25
LINC00221-201ENST00000603633 KRT5P13647 590 aa16.64■□□□□ 0.25
LINC00221-201ENST00000603633 UCHL3P15374 230 aa16.64■□□□□ 0.25
LINC00221-201ENST00000603633 SLC8A3P57103 927 aa16.64■□□□□ 0.25
LINC00221-201ENST00000603633 ORC1Q13415 861 aa16.64■□□□□ 0.25
LINC00221-201ENST00000603633 PABPC1LQ4VXU2 614 aaKnown RBP16.64■□□□□ 0.25
LINC00221-201ENST00000603633 SGO2Q562F6 1265 aa16.64■□□□□ 0.25
LINC00221-201ENST00000603633 TJAP1Q5JTD0 557 aa16.64■□□□□ 0.25
LINC00221-201ENST00000603633 ARHGAP17Q68EM7 881 aa16.64■□□□□ 0.25
LINC00221-201ENST00000603633 GRASPQ7Z6J2 395 aaPredicted RBP16.64■□□□□ 0.25
LINC00221-201ENST00000603633 DNAJB7Q7Z6W7 309 aaPredicted RBP16.64■□□□□ 0.25
LINC00221-201ENST00000603633 FAM35AQ86V20 835 aa16.64■□□□□ 0.25
LINC00221-201ENST00000603633 FUKQ8N0W3 1084 aa16.64■□□□□ 0.25
LINC00221-201ENST00000603633 KAT5Q92993 513 aa16.64■□□□□ 0.25
LINC00221-201ENST00000603633 ZNF518BQ9C0D4 1074 aa16.64■□□□□ 0.25
LINC00221-201ENST00000603633 SIX2Q9NPC8 291 aa16.64■□□□□ 0.25
LINC00221-201ENST00000603633 DMAP1Q9NPF5 467 aaPredicted RBP16.64■□□□□ 0.25
LINC00221-201ENST00000603633 ASAH2Q9NR71 780 aa16.64■□□□□ 0.25
LINC00221-201ENST00000603633 CEP72Q9P209 647 aa16.64■□□□□ 0.25
LINC00221-201ENST00000603633 DNMT3BQ9UBC3 853 aaKnown RBP16.64■□□□□ 0.25
LINC00221-201ENST00000603633 USTQ9Y2C2 406 aa16.64■□□□□ 0.25
LINC00221-201ENST00000603633 NR2E1Q9Y466 385 aa16.64■□□□□ 0.25
LINC00221-201ENST00000603633 CLUHO75153 1309 aa16.63■□□□□ 0.25
LINC00221-201ENST00000603633 A0A1B0GTH6 734 aa16.63■□□□□ 0.25
LINC00221-201ENST00000603633 MICAL2O94851 1124 aa16.63■□□□□ 0.25
LINC00221-201ENST00000603633 CCDC130P13994 396 aa16.63■□□□□ 0.25
LINC00221-201ENST00000603633 CD19P15391 556 aa16.63■□□□□ 0.25
LINC00221-201ENST00000603633 ATF6P18850 670 aa16.63■□□□□ 0.25
LINC00221-201ENST00000603633 FANCCQ00597 558 aa16.63■□□□□ 0.25
LINC00221-201ENST00000603633 SYCP1Q15431 976 aa16.63■□□□□ 0.25
LINC00221-201ENST00000603633 DDR2Q16832 855 aa16.63■□□□□ 0.25
LINC00221-201ENST00000603633 ARHGAP44Q17R89 818 aa16.63■□□□□ 0.25
LINC00221-201ENST00000603633 CCDC142Q17RM4 750 aa16.63■□□□□ 0.25
LINC00221-201ENST00000603633 PDZD4Q76G19 769 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms