RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 WDR91A4D1P6 747 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 H0Y858 1186 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 hCG_2039718K7EN88 272 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 KRIT1O00522 736 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 ZBTB39O15060 712 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 ZNF185O15231 689 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 EPN2O95208 641 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 ZBTB11O95625 1053 aaPredicted RBP9.25□□□□□ -0.93
COMMD3-215ENST00000602574 CD4P01730 458 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 KRT10P13645 584 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 PTX3P26022 381 aaPredicted RBP9.25□□□□□ -0.93
COMMD3-215ENST00000602574 EPHB2P29323 1055 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 HARS2P49590 506 aaKnown RBP9.25□□□□□ -0.93
COMMD3-215ENST00000602574 SELENBP1Q13228 472 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 DGKDQ16760 1214 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 ADCK5Q3MIX3 580 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 IFFO2Q5TF58 517 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 OTOP3Q7RTS5 596 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 VSIG1Q86XK7 387 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 IFNL3Q8IZI9 196 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 METTL25Q8N6Q8 603 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 TEX47Q8TBZ9 253 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 TAMM41Q96BW9 452 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 MAP6Q96JE9 813 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 MEIS3Q99687 375 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 MRM3Q9HC36 420 aaKnown RBP9.25□□□□□ -0.93
COMMD3-215ENST00000602574 ZFYVE28Q9HCC9 887 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 SNRKQ9NRH2 765 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 PCDHB13Q9Y5F0 798 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 ALKQ9UM73 1620 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 TRPC5OSA6NMA1 111 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 ATP6V1G2-DDX39BF2Z307 99 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 IFRD1O00458 451 aaPredicted RBP9.25□□□□□ -0.93
COMMD3-215ENST00000602574 NUAK1O60285 661 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 MICAL2O94851 1124 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 ZWINTO95229 277 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 TNFAIP8O95379 198 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 C8BP07358 591 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 NCAM1P13591 858 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 RAC2P15153 192 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 HPGDP15428 266 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 PLCG1P19174 1290 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 RRM2P31350 389 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 CAP2P40123 477 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 SCNN1DP51172 638 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 HERVK_113P62684 666 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 GHRHRQ02643 423 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 GRSF1Q12849 480 aaKnown RBP eCLIP9.25□□□□□ -0.93
COMMD3-215ENST00000602574 PDE1CQ14123 709 aaPredicted RBP9.25□□□□□ -0.93
COMMD3-215ENST00000602574 PDK3Q15120 406 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 HP1BP3Q5SSJ5 553 aaPredicted RBP9.25□□□□□ -0.93
COMMD3-215ENST00000602574 DRICH1Q6PGQ1 229 aaPredicted RBP9.25□□□□□ -0.93
COMMD3-215ENST00000602574 BTNL9Q6UXG8 535 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 TMC5Q6UXY8 1006 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 PIK3AP1Q6ZUJ8 805 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 RHOUQ7L0Q8 258 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 TAS2R42Q7RTR8 314 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 CDR2LQ86X02 465 aaPredicted RBP9.25□□□□□ -0.93
COMMD3-215ENST00000602574 UNC45BQ8IWX7 931 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 RTKN2Q8IZC4 609 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 FAM109AQ8N4B1 249 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 RFWD2Q8NHY2 731 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 KBTBD7Q8WVZ9 684 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 SLC44A1Q8WWI5 657 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 TRIB2Q92519 343 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 FATE1Q969F0 183 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 TP53INP1Q96A56 240 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 C17orf75Q9HAS0 396 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 CYP26B1Q9NR63 512 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 NDE1Q9NXR1 346 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 SENP1Q9P0U3 644 aa9.25□□□□□ -0.93
COMMD3-215ENST00000602574 ADD3Q9UEY8 706 aaKnown RBP9.25□□□□□ -0.93
COMMD3-215ENST00000602574 C15orf38-AP3S2A0A0A6YYH1 394 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 SH3D21A4FU49 640 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 SFI1A8K8P3 1242 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 H3BRJ5 948 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 DENRO43583 198 aaKnown RBP9.24□□□□□ -0.93
COMMD3-215ENST00000602574 RANBP6O60518 1105 aaKnown RBP9.24□□□□□ -0.93
COMMD3-215ENST00000602574 TCEA3O75764 348 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 GAS8O95995 478 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 DLATP10515 647 aaKnown RBP9.24□□□□□ -0.93
COMMD3-215ENST00000602574 MUTP22033 750 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 SHMT1P34896 483 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 CASP2P42575 452 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 CAP1Q01518 475 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 RNASELQ05823 741 aaKnown RBP9.24□□□□□ -0.93
COMMD3-215ENST00000602574 CFAP221Q4G0U5 840 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 TNFAIP8L3Q5GJ75 292 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 NANOGP8Q6NSW7 305 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 PLBD1Q6P4A8 553 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 AAGABQ6PD74 315 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 ABRAXAS1Q6UWZ7 409 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 USP51Q70EK9 711 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 IKBIPQ70UQ0 350 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 RTL10Q7L3V2 364 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 EPM2AIP1Q7L775 607 aaPredicted RBP9.24□□□□□ -0.93
COMMD3-215ENST00000602574 ARPINQ7Z6K5 226 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 ECHDC2Q86YB7 292 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 TRIM59Q8IWR1 403 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 ADGRG5Q8IZF4 528 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 674.1 ms