RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 CCDC78A2IDD5 438 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 PHGDHO43175 533 aaKnown RBP9.05□□□□□ -0.96
CSMD1-216ENST00000602557 ARIH2O95376 493 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 PTGS2P35354 604 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 FXR1P51114 621 aaKnown RBP eCLIP9.05□□□□□ -0.96
CSMD1-216ENST00000602557 EPB41L4AQ9HCS5 686 aaPredicted RBP9.05□□□□□ -0.96
CSMD1-216ENST00000602557 MPP6Q9NZW5 540 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 AGO2Q9UKV8 859 aaKnown RBP9.05□□□□□ -0.96
CSMD1-216ENST00000602557 TBC1D12O60347 775 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 TPI1P60174 286 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 KCNJ2P63252 427 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 FASTKD5Q7L8L6 764 aaKnown RBP9.05□□□□□ -0.96
CSMD1-216ENST00000602557 UBE2Q1Q7Z7E8 422 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 GPD1LQ8N335 351 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 TTLL6Q8N841 843 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 SUN5Q8TC36 379 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 MYL2P10916 166 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 KCNJ6P48051 423 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 ITGA8P53708 1063 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 FRMD5Q7Z6J6 570 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 SLC35G2Q8TBE7 412 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 AGPAT5Q9NUQ2 364 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 ZNF335Q9H4Z2 1342 aaPredicted RBP9.04□□□□□ -0.96
CSMD1-216ENST00000602557 COL15A1P39059 1388 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 RAD51BO15315 384 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 PAX3P23760 479 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 SFNP31947 248 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 MYLK2Q9H1R3 596 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 CLEC4MQ9H2X3 399 aaPredicted RBP9.04□□□□□ -0.96
CSMD1-216ENST00000602557 MBD2Q9UBB5 411 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 GRAP2O75791 330 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 VIL1P09327 827 aaKnown RBP9.04□□□□□ -0.96
CSMD1-216ENST00000602557 PSMB9P28065 219 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 FOXP4Q8IVH2 680 aaPredicted RBP9.04□□□□□ -0.96
CSMD1-216ENST00000602557 TRIM45Q9H8W5 580 aaPredicted RBP9.04□□□□□ -0.96
CSMD1-216ENST00000602557 ATF4P18848 351 aaPredicted RBP9.04□□□□□ -0.96
CSMD1-216ENST00000602557 TFE3P19532 575 aaPredicted RBP9.04□□□□□ -0.96
CSMD1-216ENST00000602557 PSMC5P62195 406 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 FCHO2Q0JRZ9 810 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 SLC29A2Q14542 456 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 DUOXA2Q1HG44 320 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 ZNF467Q7Z7K2 595 aaPredicted RBP9.04□□□□□ -0.96
CSMD1-216ENST00000602557 RTL3Q8N8U3 475 aaKnown RBP9.04□□□□□ -0.96
CSMD1-216ENST00000602557 DMAP1Q9NPF5 467 aaPredicted RBP9.04□□□□□ -0.96
CSMD1-216ENST00000602557 IGKV5-2P06315 115 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 NDUFA5Q16718 116 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 AARS2Q5JTZ9 985 aaKnown RBP9.04□□□□□ -0.96
CSMD1-216ENST00000602557 TRAPPC11Q7Z392 1133 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 NDNQ99608 321 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 ZC3H13Q5T200 1668 aaKnown RBP9.04□□□□□ -0.96
CSMD1-216ENST00000602557 ABCA6Q8N139 1617 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 TRIM43BA6NCK2 446 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 CDH16O75309 829 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 PTDSS1P48651 473 aaKnown RBP9.04□□□□□ -0.96
CSMD1-216ENST00000602557 ABATP80404 500 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 TTLL4Q14679 1199 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 C12orf60Q5U649 245 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 FAM20AQ96MK3 541 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 FAM111AQ96PZ2 611 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 ISCUQ9H1K1 167 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 TMEM161AQ9NX61 479 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 ATP9BO43861 1147 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 ZNF862O60290 1169 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 RTN2O75298 545 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 ATP2C1P98194 919 aaPredicted RBP9.04□□□□□ -0.96
CSMD1-216ENST00000602557 RALGDSQ12967 914 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 WASHC2DQ5SRD0 308 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 ATPAF2Q8N5M1 289 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 AGAP3Q96P47 875 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 ABCA8O94911 1581 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 C5orf58C9J3I9 102 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 PLEKP08567 350 aaPredicted RBP9.04□□□□□ -0.96
CSMD1-216ENST00000602557 SLC34A1Q06495 639 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 COL23A1Q86Y22 540 aaPredicted RBP9.04□□□□□ -0.96
CSMD1-216ENST00000602557 GUF1Q8N442 669 aaKnown RBP9.04□□□□□ -0.96
CSMD1-216ENST00000602557 STK32AQ8WU08 396 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 CEP44Q9C0F1 390 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 POLR1BQ9H9Y6 1135 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 PLEKHA5Q9HAU0 1116 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 RFX7Q2KHR2 1363 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 SUPT3HB4E1H0 165 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 TRIQKQ629K1 86 aa9.04□□□□□ -0.96
CSMD1-216ENST00000602557 SLC16A3O15427 465 aaKnown RBP9.03□□□□□ -0.96
CSMD1-216ENST00000602557 RPS6KA3P51812 740 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 CDK17Q00537 523 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 RBM44Q6ZP01 1051 aaKnown RBP9.03□□□□□ -0.96
CSMD1-216ENST00000602557 ZSCAN18Q8TBC5 510 aaPredicted RBP9.03□□□□□ -0.96
CSMD1-216ENST00000602557 BTN2A2Q8WVV5 523 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 NPHP4O75161 1426 aaPredicted RBP9.03□□□□□ -0.96
CSMD1-216ENST00000602557 GOLGA8TH3BQL2 631 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 BNC2Q6ZN30 1099 aaPredicted RBP9.03□□□□□ -0.96
CSMD1-216ENST00000602557 FUKQ8N0W3 1084 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 GIPC3Q8TF64 312 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 MMP19Q99542 508 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 OSBPL10Q9BXB5 764 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 AFDNP55196 1824 aaKnown RBP9.03□□□□□ -0.96
CSMD1-216ENST00000602557 MAGEA4P43358 317 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 RCAN1P53805 252 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 EFHC1Q5JVL4 640 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 ARID3BQ8IVW6 561 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms