RNA–Protein interactions for RNA: ENST00000600499.5

LTBP4-228, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-228ENST00000600499 LRRC3Q9BY71 257 aa15.55■□□□□ 0.08
LTBP4-228ENST00000600499 B3GNT5Q9BYG0 378 aa15.55■□□□□ 0.08
LTBP4-228ENST00000600499 ELOVL4Q9GZR5 314 aa15.55■□□□□ 0.08
LTBP4-228ENST00000600499 POMKQ9H5K3 350 aa15.55■□□□□ 0.08
LTBP4-228ENST00000600499 SIX2Q9NPC8 291 aa15.55■□□□□ 0.08
LTBP4-228ENST00000600499 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.55■□□□□ 0.081e-6■■■■□ 22.4
LTBP4-228ENST00000600499 ABI2Q9NYB9 513 aaPredicted RBP15.55■□□□□ 0.08
LTBP4-228ENST00000600499 DNMT3BQ9UBC3 853 aaKnown RBP15.55■□□□□ 0.08
LTBP4-228ENST00000600499 APEX2Q9UBZ4 518 aa15.55■□□□□ 0.08
LTBP4-228ENST00000600499 USTQ9Y2C2 406 aa15.55■□□□□ 0.08
LTBP4-228ENST00000600499 C19orf67A6NJJ6 358 aa15.54■□□□□ 0.08
LTBP4-228ENST00000600499 SPDYE4A6NLX3 237 aa15.54■□□□□ 0.08
LTBP4-228ENST00000600499 CCL16O15467 120 aa15.54■□□□□ 0.08
LTBP4-228ENST00000600499 PTPN2P17706 415 aa15.54■□□□□ 0.08
LTBP4-228ENST00000600499 ATF6P18850 670 aa15.54■□□□□ 0.08
LTBP4-228ENST00000600499 CYP2F1P24903 491 aa15.54■□□□□ 0.08
LTBP4-228ENST00000600499 ALDH1A3P47895 512 aa15.54■□□□□ 0.08
LTBP4-228ENST00000600499 EPHB3P54753 998 aa15.54■□□□□ 0.08
LTBP4-228ENST00000600499 ZNF445P59923 1031 aa15.54■□□□□ 0.08
LTBP4-228ENST00000600499 LRMPQ12912 555 aa15.54■□□□□ 0.08
LTBP4-228ENST00000600499 ACOT1Q86TX2 421 aa15.54■□□□□ 0.08
LTBP4-228ENST00000600499 FUKQ8N0W3 1084 aa15.54■□□□□ 0.08
LTBP4-228ENST00000600499 PPM1KQ8N3J5 372 aa15.54■□□□□ 0.08
LTBP4-228ENST00000600499 SLC4A11Q8NBS3 891 aa15.54■□□□□ 0.08
LTBP4-228ENST00000600499 ANKRD20A12PQ8NF67 263 aa15.54■□□□□ 0.08
LTBP4-228ENST00000600499 FAM200AQ8TCP9 573 aa15.54■□□□□ 0.08
LTBP4-228ENST00000600499 PSMG2Q969U7 264 aa15.54■□□□□ 0.08
LTBP4-228ENST00000600499 TMEM176AQ96HP8 235 aa15.54■□□□□ 0.08
LTBP4-228ENST00000600499 SPATA17Q96L03 361 aa15.54■□□□□ 0.08
LTBP4-228ENST00000600499 C8orf48Q96LL4 319 aa15.54■□□□□ 0.08
LTBP4-228ENST00000600499 HNRNPABQ99729 332 aaKnown RBP15.54■□□□□ 0.08
LTBP4-228ENST00000600499 CRACR2AQ9BSW2 395 aa15.54■□□□□ 0.08
LTBP4-228ENST00000600499 APOL5Q9BWW9 433 aa15.54■□□□□ 0.08
LTBP4-228ENST00000600499 DNAI2Q9GZS0 605 aa15.54■□□□□ 0.08
LTBP4-228ENST00000600499 PLCB1Q9NQ66 1216 aa15.54■□□□□ 0.08
LTBP4-228ENST00000600499 TAB2Q9NYJ8 693 aa15.54■□□□□ 0.08
LTBP4-228ENST00000600499 CDH22Q9UJ99 828 aa15.54■□□□□ 0.08
LTBP4-228ENST00000600499 KIAA1257Q9ULG3 409 aa15.54■□□□□ 0.08
LTBP4-228ENST00000600499 CLUHO75153 1309 aa15.53■□□□□ 0.08
LTBP4-228ENST00000600499 LGALS16A8MUM7 142 aa15.53■□□□□ 0.08
LTBP4-228ENST00000600499 PAEPP09466 180 aa15.53■□□□□ 0.08
LTBP4-228ENST00000600499 ATP1A3P13637 1013 aa15.53■□□□□ 0.08
LTBP4-228ENST00000600499 CD58P19256 250 aa15.53■□□□□ 0.08
LTBP4-228ENST00000600499 TRIM21P19474 475 aaKnown RBP15.53■□□□□ 0.08
LTBP4-228ENST00000600499 ZNF132P52740 706 aa15.53■□□□□ 0.08
LTBP4-228ENST00000600499 RPL10AP62906 217 aaKnown RBP15.53■□□□□ 0.08
LTBP4-228ENST00000600499 MGAT5BQ3V5L5 792 aa15.53■□□□□ 0.08
LTBP4-228ENST00000600499 ARHGAP17Q68EM7 881 aa15.53■□□□□ 0.08
LTBP4-228ENST00000600499 ITIH5Q86UX2 942 aa15.53■□□□□ 0.08
LTBP4-228ENST00000600499 ADHFE1Q8IWW8 467 aa15.53■□□□□ 0.08
LTBP4-228ENST00000600499 KAT5Q92993 513 aa15.53■□□□□ 0.08
LTBP4-228ENST00000600499 ZNF512Q96ME7 567 aaPredicted RBP15.53■□□□□ 0.08
LTBP4-228ENST00000600499 ERGIC2Q96RQ1 377 aa15.53■□□□□ 0.08
LTBP4-228ENST00000600499 LPIN3Q9BQK8 851 aa15.53■□□□□ 0.08
LTBP4-228ENST00000600499 VPS16Q9H269 839 aa15.53■□□□□ 0.08
LTBP4-228ENST00000600499 CSNK1G1Q9HCP0 422 aa15.53■□□□□ 0.08
LTBP4-228ENST00000600499 DAAM1Q9Y4D1 1078 aa15.53■□□□□ 0.08
LTBP4-228ENST00000600499 BECN2A8MW95 431 aa15.52■□□□□ 0.08
LTBP4-228ENST00000600499 LOC730098B7Z3J9 87 aa15.52■□□□□ 0.08
LTBP4-228ENST00000600499 NOL4O94818 638 aa15.52■□□□□ 0.08
LTBP4-228ENST00000600499 CLSTN1O94985 981 aa15.52■□□□□ 0.08
LTBP4-228ENST00000600499 TPM2P07951 284 aa15.52■□□□□ 0.08
LTBP4-228ENST00000600499 RHOP08100 348 aa15.52■□□□□ 0.08
LTBP4-228ENST00000600499 HMGA1P17096 107 aaKnown RBP15.52■□□□□ 0.08
LTBP4-228ENST00000600499 CDK11BP21127 795 aaKnown RBP15.52■□□□□ 0.08
LTBP4-228ENST00000600499 RFX1P22670 979 aa15.52■□□□□ 0.08
LTBP4-228ENST00000600499 BDNFP23560 247 aa15.52■□□□□ 0.08
LTBP4-228ENST00000600499 MFAP3P55082 362 aa15.52■□□□□ 0.08
LTBP4-228ENST00000600499 ZP2Q05996 745 aa15.52■□□□□ 0.08
LTBP4-228ENST00000600499 PRSS36Q5K4E3 855 aa15.52■□□□□ 0.08
LTBP4-228ENST00000600499 RRAGAQ7L523 313 aa15.52■□□□□ 0.08
LTBP4-228ENST00000600499 GRASPQ7Z6J2 395 aaPredicted RBP15.52■□□□□ 0.08
LTBP4-228ENST00000600499 DNAJB7Q7Z6W7 309 aaPredicted RBP15.52■□□□□ 0.08
LTBP4-228ENST00000600499 TMC8Q8IU68 726 aa15.52■□□□□ 0.08
LTBP4-228ENST00000600499 ELMOD1Q8N336 334 aa15.52■□□□□ 0.08
LTBP4-228ENST00000600499 C12orf29Q8N999 325 aa15.52■□□□□ 0.08
LTBP4-228ENST00000600499 SHC3Q92529 594 aa15.52■□□□□ 0.08
LTBP4-228ENST00000600499 TRMT2BQ96GJ1 504 aaKnown RBP15.52■□□□□ 0.08
LTBP4-228ENST00000600499 MYRFLQ96LU7 910 aa15.52■□□□□ 0.08
LTBP4-228ENST00000600499 SEPT5Q99719 369 aaPredicted RBP15.52■□□□□ 0.08
LTBP4-228ENST00000600499 NAA15Q9BXJ9 866 aaKnown RBP15.52■□□□□ 0.08
LTBP4-228ENST00000600499 ZNF518BQ9C0D4 1074 aa15.52■□□□□ 0.08
LTBP4-228ENST00000600499 PIDD1Q9HB75 910 aa15.52■□□□□ 0.08
LTBP4-228ENST00000600499 UBE2TQ9NPD8 197 aaPredicted RBP15.52■□□□□ 0.08
LTBP4-228ENST00000600499 TMEM30AQ9NV96 361 aa15.52■□□□□ 0.08
LTBP4-228ENST00000600499 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.52■□□□□ 0.08
LTBP4-228ENST00000600499 SIK3Q9Y2K2 1263 aa15.52■□□□□ 0.08
LTBP4-228ENST00000600499 GREB1Q4ZG55 1949 aa15.52■□□□□ 0.07
LTBP4-228ENST00000600499 DOCK8Q8NF50 2099 aa15.52■□□□□ 0.07
LTBP4-228ENST00000600499 ATP8B3O60423 1300 aa15.51■□□□□ 0.07
LTBP4-228ENST00000600499 RNF225M0QZC1 329 aaPredicted RBP15.51■□□□□ 0.07
LTBP4-228ENST00000600499 TRIM66O15016 1216 aa15.51■□□□□ 0.07
LTBP4-228ENST00000600499 SOAT2O75908 522 aa15.51■□□□□ 0.07
LTBP4-228ENST00000600499 CSH1P0DML2 217 aa15.51■□□□□ 0.07
LTBP4-228ENST00000600499 CSH2P0DML3 217 aa15.51■□□□□ 0.07
LTBP4-228ENST00000600499 CYP27A1Q02318 531 aa15.51■□□□□ 0.07
LTBP4-228ENST00000600499 PABPC1LQ4VXU2 614 aaKnown RBP15.51■□□□□ 0.07
LTBP4-228ENST00000600499 KLHDC7AQ5VTJ3 777 aa15.51■□□□□ 0.07
LTBP4-228ENST00000600499 IQCEQ6IPM2 695 aa15.51■□□□□ 0.07
LTBP4-228ENST00000600499 FAM35AQ86V20 835 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms