RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 CALCRLQ16602 461 aa19.1■□□□□ 0.65
SSBP4-207ENST00000600244 GAB4Q2WGN9 574 aa19.1■□□□□ 0.65
SSBP4-207ENST00000600244 DSTYKQ6XUX3 929 aa19.1■□□□□ 0.65
SSBP4-207ENST00000600244 TAS1R3Q7RTX0 852 aa19.1■□□□□ 0.65
SSBP4-207ENST00000600244 ALLCQ8N6M5 410 aa19.1■□□□□ 0.65
SSBP4-207ENST00000600244 IL17RCQ8NAC3 791 aa19.1■□□□□ 0.65
SSBP4-207ENST00000600244 TARS2Q9BW92 718 aaKnown RBP19.1■□□□□ 0.65
SSBP4-207ENST00000600244 MRPL4Q9BYD3 311 aaKnown RBP19.1■□□□□ 0.65
SSBP4-207ENST00000600244 GOLGA4Q13439 2230 aaKnown RBP19.1■□□□□ 0.65
SSBP4-207ENST00000600244 TXKP42681 527 aa19.09■□□□□ 0.65
SSBP4-207ENST00000600244 IFNAR2P48551 515 aa19.09■□□□□ 0.65
SSBP4-207ENST00000600244 ZNF33AQ06730 810 aa19.09■□□□□ 0.65
SSBP4-207ENST00000600244 DMP1Q13316 513 aaPredicted RBP19.09■□□□□ 0.65
SSBP4-207ENST00000600244 MARCH9Q86YJ5 346 aa19.09■□□□□ 0.65
SSBP4-207ENST00000600244 EFCAB13Q8IY85 973 aa19.09■□□□□ 0.65
SSBP4-207ENST00000600244 DEFB119Q8N690 84 aa19.09■□□□□ 0.65
SSBP4-207ENST00000600244 TXNDC5Q8NBS9 432 aaKnown RBP19.09■□□□□ 0.65
SSBP4-207ENST00000600244 MRPS31Q92665 395 aaKnown RBP19.09■□□□□ 0.65
SSBP4-207ENST00000600244 MTMR9Q96QG7 549 aa19.09■□□□□ 0.65
SSBP4-207ENST00000600244 LINC00597Q9H2U6 94 aa19.09■□□□□ 0.65
SSBP4-207ENST00000600244 TMEM134Q9H6X4 195 aa19.09■□□□□ 0.65
SSBP4-207ENST00000600244 PCOLCE2Q9UKZ9 415 aa19.09■□□□□ 0.65
SSBP4-207ENST00000600244 CEP192Q8TEP8 1941 aa19.09■□□□□ 0.65
SSBP4-207ENST00000600244 UNC79Q9P2D8 2635 aa19.09■□□□□ 0.65
SSBP4-207ENST00000600244 A0A1W2PQD8 194 aa19.08■□□□□ 0.64
SSBP4-207ENST00000600244 ARHGEF35A5YM69 484 aa19.08■□□□□ 0.64
SSBP4-207ENST00000600244 HAPLN1P10915 354 aaPredicted RBP19.08■□□□□ 0.64
SSBP4-207ENST00000600244 CDR1P51861 262 aa19.08■□□□□ 0.64
SSBP4-207ENST00000600244 RPL6Q02878 288 aaKnown RBP19.08■□□□□ 0.64
SSBP4-207ENST00000600244 USP4Q13107 963 aa19.08■□□□□ 0.64
SSBP4-207ENST00000600244 TOB2Q14106 344 aaPredicted RBP19.08■□□□□ 0.64
SSBP4-207ENST00000600244 HSF5Q4G112 596 aaPredicted RBP19.08■□□□□ 0.64
SSBP4-207ENST00000600244 SLC39A12Q504Y0 691 aa19.08■□□□□ 0.64
SSBP4-207ENST00000600244 MPZL3Q6UWV2 235 aa19.08■□□□□ 0.64
SSBP4-207ENST00000600244 PIP4K2CQ8TBX8 421 aa19.08■□□□□ 0.64
SSBP4-207ENST00000600244 KIFAP3Q92845 792 aa19.08■□□□□ 0.64
SSBP4-207ENST00000600244 TCHPQ9BT92 498 aa19.08■□□□□ 0.64
SSBP4-207ENST00000600244 ZCWPW1Q9H0M4 648 aa19.08■□□□□ 0.64
SSBP4-207ENST00000600244 GJB4Q9NTQ9 266 aa19.08■□□□□ 0.64
SSBP4-207ENST00000600244 TOR4AQ9NXH8 423 aa19.08■□□□□ 0.64
SSBP4-207ENST00000600244 HELZP42694 1942 aaKnown RBP19.08■□□□□ 0.64
SSBP4-207ENST00000600244 OBSL1O75147 1896 aa19.07■□□□□ 0.64
SSBP4-207ENST00000600244 PHLPP2Q6ZVD8 1323 aa19.07■□□□□ 0.64
SSBP4-207ENST00000600244 KLF8O95600 359 aaPredicted RBP19.07■□□□□ 0.64
SSBP4-207ENST00000600244 CYP3A5P20815 502 aa19.07■□□□□ 0.64
SSBP4-207ENST00000600244 SEZ6Q53EL9 994 aa19.07■□□□□ 0.64
SSBP4-207ENST00000600244 SLC36A4Q6YBV0 504 aa19.07■□□□□ 0.64
SSBP4-207ENST00000600244 SLC41A1Q8IVJ1 513 aa19.07■□□□□ 0.64
SSBP4-207ENST00000600244 SFTPA1Q8IWL2 248 aa19.07■□□□□ 0.64
SSBP4-207ENST00000600244 HMGB4Q8WW32 186 aa19.07■□□□□ 0.64
SSBP4-207ENST00000600244 ZBTB45Q96K62 511 aaPredicted RBP19.07■□□□□ 0.64
SSBP4-207ENST00000600244 SLC22A12Q96S37 553 aa19.07■□□□□ 0.64
SSBP4-207ENST00000600244 CYP2S1Q96SQ9 504 aa19.07■□□□□ 0.64
SSBP4-207ENST00000600244 BCCIPQ9P287 314 aaKnown RBP eCLIP19.07■□□□□ 0.64
SSBP4-207ENST00000600244 PTPRQQ9UMZ3 2332 aa19.07■□□□□ 0.64
SSBP4-207ENST00000600244 CPLX1O14810 134 aa19.06■□□□□ 0.64
SSBP4-207ENST00000600244 ADAM23O75077 832 aa19.06■□□□□ 0.64
SSBP4-207ENST00000600244 TADA3O75528 432 aa19.06■□□□□ 0.64
SSBP4-207ENST00000600244 ITPKBP27987 946 aa19.06■□□□□ 0.64
SSBP4-207ENST00000600244 SPAG1Q07617 926 aa19.06■□□□□ 0.64
SSBP4-207ENST00000600244 EOGTQ5NDL2 527 aa19.06■□□□□ 0.64
SSBP4-207ENST00000600244 LRRTM3Q86VH5 581 aa19.06■□□□□ 0.64
SSBP4-207ENST00000600244 C2orf15Q8WU43 125 aaKnown RBP19.06■□□□□ 0.64
SSBP4-207ENST00000600244 SENP8Q96LD8 212 aa19.06■□□□□ 0.64
SSBP4-207ENST00000600244 TMEM206Q9H813 350 aa19.06■□□□□ 0.64
SSBP4-207ENST00000600244 PLEKHA5Q9HAU0 1116 aa19.06■□□□□ 0.64
SSBP4-207ENST00000600244 PDRG1Q9NUG6 133 aa19.06■□□□□ 0.64
SSBP4-207ENST00000600244 A0A0A0MRY4 1105 aa19.05■□□□□ 0.64
SSBP4-207ENST00000600244 PPEF2O14830 753 aa19.05■□□□□ 0.64
SSBP4-207ENST00000600244 CYP11A1P05108 521 aa19.05■□□□□ 0.64
SSBP4-207ENST00000600244 HARSP12081 509 aaKnown RBP19.05■□□□□ 0.64
SSBP4-207ENST00000600244 TIE1P35590 1138 aa19.05■□□□□ 0.64
SSBP4-207ENST00000600244 KIR2DL1P43626 348 aaPredicted RBP19.05■□□□□ 0.64
SSBP4-207ENST00000600244 NPTX2P47972 431 aa19.05■□□□□ 0.64
SSBP4-207ENST00000600244 LILRA4P59901 499 aa19.05■□□□□ 0.64
SSBP4-207ENST00000600244 MESP2Q0VG99 397 aa19.05■□□□□ 0.64
SSBP4-207ENST00000600244 EMC10Q5UCC4 262 aa19.05■□□□□ 0.64
SSBP4-207ENST00000600244 BAHD1Q8TBE0 780 aaPredicted RBP19.05■□□□□ 0.64
SSBP4-207ENST00000600244 SPPL2BQ8TCT7 592 aa19.05■□□□□ 0.64
SSBP4-207ENST00000600244 TNFRSF25Q93038 417 aa19.05■□□□□ 0.64
SSBP4-207ENST00000600244 DCBLD2Q96PD2 775 aa19.05■□□□□ 0.64
SSBP4-207ENST00000600244 ARHGAP28Q9P2N2 729 aa19.05■□□□□ 0.64
SSBP4-207ENST00000600244 UBQLN1Q9UMX0 589 aaKnown RBP19.05■□□□□ 0.64
SSBP4-207ENST00000600244 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.05■□□□□ 0.64
SSBP4-207ENST00000600244 TCRBV21S2A2A0A5A6 115 aa19.04■□□□□ 0.64
SSBP4-207ENST00000600244 TTC26A0AVF1 554 aa19.04■□□□□ 0.64
SSBP4-207ENST00000600244 WNT7AO00755 349 aa19.04■□□□□ 0.64
SSBP4-207ENST00000600244 ARHGAP6O43182 974 aa19.04■□□□□ 0.64
SSBP4-207ENST00000600244 NFATC1O95644 943 aa19.04■□□□□ 0.64
SSBP4-207ENST00000600244 USP17L7P0C7H9 530 aa19.04■□□□□ 0.64
SSBP4-207ENST00000600244 ODC1P11926 461 aa19.04■□□□□ 0.64
SSBP4-207ENST00000600244 TCF3P15923 654 aa19.04■□□□□ 0.64
SSBP4-207ENST00000600244 GUCY2FP51841 1108 aa19.04■□□□□ 0.64
SSBP4-207ENST00000600244 NEK4P51957 841 aa19.04■□□□□ 0.64
SSBP4-207ENST00000600244 SCRN1Q12765 414 aa19.04■□□□□ 0.64
SSBP4-207ENST00000600244 SMARCB1Q12824 385 aa19.04■□□□□ 0.64
SSBP4-207ENST00000600244 RABEP1Q15276 862 aa19.04■□□□□ 0.64
SSBP4-207ENST00000600244 PLEKHG6Q3KR16 790 aa19.04■□□□□ 0.64
SSBP4-207ENST00000600244 PGBD3Q8N328 593 aa19.04■□□□□ 0.64
SSBP4-207ENST00000600244 PDCD7Q8N8D1 485 aaKnown RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms