RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 DNAJB7Q7Z6W7 309 aaPredicted RBP20.79■□□□□ 0.92
SHKBP1-221ENST00000599833 TMEM150AQ86TG1 271 aa20.79■□□□□ 0.92
SHKBP1-221ENST00000599833 NPAS3Q8IXF0 933 aa20.79■□□□□ 0.92
SHKBP1-221ENST00000599833 GPR152Q8TDT2 470 aa20.79■□□□□ 0.92
SHKBP1-221ENST00000599833 FGF13Q92913 245 aa20.79■□□□□ 0.92
SHKBP1-221ENST00000599833 CORO1BQ9BR76 489 aa20.79■□□□□ 0.92
SHKBP1-221ENST00000599833 IMPG2Q9BZV3 1241 aa20.79■□□□□ 0.92
SHKBP1-221ENST00000599833 ZNF518BQ9C0D4 1074 aa20.79■□□□□ 0.92
SHKBP1-221ENST00000599833 NR2E1Q9Y466 385 aa20.79■□□□□ 0.92
SHKBP1-221ENST00000599833 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.79■□□□□ 0.92
SHKBP1-221ENST00000599833 TNFRSF10AO00220 468 aa20.78■□□□□ 0.92
SHKBP1-221ENST00000599833 CLDN5O00501 218 aa20.78■□□□□ 0.92
SHKBP1-221ENST00000599833 MICAL2O94851 1124 aa20.78■□□□□ 0.92
SHKBP1-221ENST00000599833 BDNFP23560 247 aa20.78■□□□□ 0.92
SHKBP1-221ENST00000599833 ALDH1A3P47895 512 aa20.78■□□□□ 0.92
SHKBP1-221ENST00000599833 MTMR3Q13615 1198 aa20.78■□□□□ 0.92
SHKBP1-221ENST00000599833 DDR2Q16832 855 aa20.78■□□□□ 0.92
SHKBP1-221ENST00000599833 GAREM2Q75VX8 874 aa20.78■□□□□ 0.92
SHKBP1-221ENST00000599833 OTOP3Q7RTS5 596 aa20.78■□□□□ 0.92
SHKBP1-221ENST00000599833 ACOT1Q86TX2 421 aa20.78■□□□□ 0.92
SHKBP1-221ENST00000599833 SPATA2LQ8IUW3 424 aaPredicted RBP20.78■□□□□ 0.92
SHKBP1-221ENST00000599833 FUKQ8N0W3 1084 aa20.78■□□□□ 0.92
SHKBP1-221ENST00000599833 TDRD5Q8NAT2 981 aaKnown RBP20.78■□□□□ 0.92
SHKBP1-221ENST00000599833 KAT5Q92993 513 aa20.78■□□□□ 0.92
SHKBP1-221ENST00000599833 CISHQ9NSE2 258 aa20.78■□□□□ 0.92
SHKBP1-221ENST00000599833 ANO10Q9NW15 660 aa20.78■□□□□ 0.92
SHKBP1-221ENST00000599833 NFE2L3Q9Y4A8 694 aa20.78■□□□□ 0.92
SHKBP1-221ENST00000599833 ASB3Q9Y575 518 aa20.78■□□□□ 0.92
SHKBP1-221ENST00000599833 DLL1O00548 723 aa20.77■□□□□ 0.92
SHKBP1-221ENST00000599833 LAMP2P13473 410 aa20.77■□□□□ 0.92
SHKBP1-221ENST00000599833 ACO1P21399 889 aaKnown RBP20.77■□□□□ 0.92
SHKBP1-221ENST00000599833 SSTR3P32745 418 aaPredicted RBP20.77■□□□□ 0.92
SHKBP1-221ENST00000599833 EPHB3P54753 998 aa20.77■□□□□ 0.92
SHKBP1-221ENST00000599833 CUL2Q13617 745 aa20.77■□□□□ 0.92
SHKBP1-221ENST00000599833 MAPRE1Q15691 268 aaKnown RBP20.77■□□□□ 0.92
SHKBP1-221ENST00000599833 HSP90AA4PQ58FG1 418 aa20.77■□□□□ 0.92
SHKBP1-221ENST00000599833 SASS6Q6UVJ0 657 aa20.77■□□□□ 0.92
SHKBP1-221ENST00000599833 C4orf50Q6ZRC1 276 aa20.77■□□□□ 0.92
SHKBP1-221ENST00000599833 ARHGEF19Q8IW93 802 aa20.77■□□□□ 0.92
SHKBP1-221ENST00000599833 C12orf29Q8N999 325 aa20.77■□□□□ 0.92
SHKBP1-221ENST00000599833 EHBP1Q8NDI1 1231 aa20.77■□□□□ 0.92
SHKBP1-221ENST00000599833 SHKBP1Q8TBC3 707 aa20.77■□□□□ 0.92
SHKBP1-221ENST00000599833 GIPC2Q8TF65 315 aa20.77■□□□□ 0.92
SHKBP1-221ENST00000599833 ZNF512Q96ME7 567 aaPredicted RBP20.77■□□□□ 0.92
SHKBP1-221ENST00000599833 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.77■□□□□ 0.921e-8■■■■■ 45.1
SHKBP1-221ENST00000599833 MAGEC2Q9UBF1 373 aaPredicted RBP20.77■□□□□ 0.92
SHKBP1-221ENST00000599833 CDH7Q9ULB5 785 aa20.77■□□□□ 0.92
SHKBP1-221ENST00000599833 TECTAO75443 2155 aa20.76■□□□□ 0.91
SHKBP1-221ENST00000599833 ANHXE9PGG2 379 aa20.76■□□□□ 0.91
SHKBP1-221ENST00000599833 TADA3O75528 432 aa20.76■□□□□ 0.91
SHKBP1-221ENST00000599833 NOL4O94818 638 aa20.76■□□□□ 0.91
SHKBP1-221ENST00000599833 CD58P19256 250 aa20.76■□□□□ 0.91
SHKBP1-221ENST00000599833 PHLDB3Q6NSJ2 640 aa20.76■□□□□ 0.91
SHKBP1-221ENST00000599833 VSTM1Q6UX27 236 aa20.76■□□□□ 0.91
SHKBP1-221ENST00000599833 FAM35AQ86V20 835 aa20.76■□□□□ 0.91
SHKBP1-221ENST00000599833 SLC4A11Q8NBS3 891 aa20.76■□□□□ 0.91
SHKBP1-221ENST00000599833 ZMIZ2Q8NF64 920 aa20.76■□□□□ 0.91
SHKBP1-221ENST00000599833 FAM124BQ9H5Z6 455 aaPredicted RBP20.76■□□□□ 0.91
SHKBP1-221ENST00000599833 MUTYHQ9UIF7 546 aa20.76■□□□□ 0.91
SHKBP1-221ENST00000599833 NUP210Q8TEM1 1887 aaPredicted RBP20.75■□□□□ 0.91
SHKBP1-221ENST00000599833 ZNF18P17022 549 aa20.75■□□□□ 0.91
SHKBP1-221ENST00000599833 GJA1P17302 382 aa20.75■□□□□ 0.91
SHKBP1-221ENST00000599833 FCARP24071 287 aa20.75■□□□□ 0.91
SHKBP1-221ENST00000599833 RAD23BP54727 409 aa20.75■□□□□ 0.91
SHKBP1-221ENST00000599833 CYP27A1Q02318 531 aa20.75■□□□□ 0.91
SHKBP1-221ENST00000599833 LRMPQ12912 555 aa20.75■□□□□ 0.91
SHKBP1-221ENST00000599833 HTR4Q13639 388 aa20.75■□□□□ 0.91
SHKBP1-221ENST00000599833 MAN2A1Q16706 1144 aa20.75■□□□□ 0.91
SHKBP1-221ENST00000599833 WDR44Q5JSH3 913 aa20.75■□□□□ 0.91
SHKBP1-221ENST00000599833 PDZD4Q76G19 769 aaPredicted RBP20.75■□□□□ 0.91
SHKBP1-221ENST00000599833 PLCD3Q8N3E9 789 aa20.75■□□□□ 0.91
SHKBP1-221ENST00000599833 ING5Q8WYH8 240 aa20.75■□□□□ 0.91
SHKBP1-221ENST00000599833 TNIP3Q96KP6 325 aa20.75■□□□□ 0.91
SHKBP1-221ENST00000599833 SPATA17Q96L03 361 aa20.75■□□□□ 0.91
SHKBP1-221ENST00000599833 C8orf48Q96LL4 319 aa20.75■□□□□ 0.91
SHKBP1-221ENST00000599833 MYRFLQ96LU7 910 aa20.75■□□□□ 0.91
SHKBP1-221ENST00000599833 ZSWIM3Q96MP5 696 aa20.75■□□□□ 0.91
SHKBP1-221ENST00000599833 KREMEN1Q96MU8 473 aa20.75■□□□□ 0.91
SHKBP1-221ENST00000599833 INTS2Q9H0H0 1204 aaKnown RBP20.75■□□□□ 0.91
SHKBP1-221ENST00000599833 ASAH2Q9NR71 780 aa20.75■□□□□ 0.91
SHKBP1-221ENST00000599833 LIMD1Q9UGP4 676 aa20.75■□□□□ 0.91
SHKBP1-221ENST00000599833 MRPS23Q9Y3D9 190 aaKnown RBP20.75■□□□□ 0.91
SHKBP1-221ENST00000599833 MYH10P35580 1976 aa20.75■□□□□ 0.91
SHKBP1-221ENST00000599833 NCANO14594 1321 aa20.75■□□□□ 0.91
SHKBP1-221ENST00000599833 GTPBP10A4D1E9 387 aaKnown RBP20.74■□□□□ 0.91
SHKBP1-221ENST00000599833 SLC38A8A6NNN8 435 aa20.74■□□□□ 0.91
SHKBP1-221ENST00000599833 KCNJ18B7U540 433 aa20.74■□□□□ 0.91
SHKBP1-221ENST00000599833 PI4K2BG5E9Z4 385 aa20.74■□□□□ 0.91
SHKBP1-221ENST00000599833 BEST1O76090 585 aa20.74■□□□□ 0.91
SHKBP1-221ENST00000599833 F11P03951 625 aa20.74■□□□□ 0.91
SHKBP1-221ENST00000599833 ASGR2P07307 311 aa20.74■□□□□ 0.91
SHKBP1-221ENST00000599833 CCDC130P13994 396 aa20.74■□□□□ 0.91
SHKBP1-221ENST00000599833 GBP2P32456 591 aaPredicted RBP20.74■□□□□ 0.91
SHKBP1-221ENST00000599833 USP46P62068 366 aa20.74■□□□□ 0.91
SHKBP1-221ENST00000599833 APBA1Q02410 837 aa20.74■□□□□ 0.91
SHKBP1-221ENST00000599833 KCNJ12Q14500 433 aa20.74■□□□□ 0.91
SHKBP1-221ENST00000599833 TCP11X2Q5H9J9 407 aa20.74■□□□□ 0.91
SHKBP1-221ENST00000599833 IQCEQ6IPM2 695 aa20.74■□□□□ 0.91
SHKBP1-221ENST00000599833 APTXQ7Z2E3 356 aaKnown RBP20.74■□□□□ 0.91
SHKBP1-221ENST00000599833 ELMOD1Q8N336 334 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms