RNA–Protein interactions for RNA: ENST00000598938.1

LIG1-216, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 377 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-216ENST00000598938 CISHQ9NSE2 258 aa19.38■□□□□ 0.69
LIG1-216ENST00000598938 HMGXB4Q9UGU5 601 aa19.38■□□□□ 0.69
LIG1-216ENST00000598938 GTF3C4Q9UKN8 822 aa19.38■□□□□ 0.69
LIG1-216ENST00000598938 MYBPHLA2RUH7 354 aa19.37■□□□□ 0.69
LIG1-216ENST00000598938 PROB1E7EW31 1015 aa19.37■□□□□ 0.69
LIG1-216ENST00000598938 ZMYND10O75800 440 aa19.37■□□□□ 0.69
LIG1-216ENST00000598938 C8AP07357 584 aa19.37■□□□□ 0.69
LIG1-216ENST00000598938 PTPN1P18031 435 aaKnown RBP19.37■□□□□ 0.69
LIG1-216ENST00000598938 CD58P19256 250 aa19.37■□□□□ 0.69
LIG1-216ENST00000598938 VCPP55072 806 aaKnown RBP19.37■□□□□ 0.69
LIG1-216ENST00000598938 KCNMA1Q12791 1236 aa19.37■□□□□ 0.69
LIG1-216ENST00000598938 NFE2Q16621 373 aaPredicted RBP19.37■□□□□ 0.69
LIG1-216ENST00000598938 CCDC142Q17RM4 750 aa19.37■□□□□ 0.69
LIG1-216ENST00000598938 UVSSAQ2YD98 709 aa19.37■□□□□ 0.69
LIG1-216ENST00000598938 LIN9Q5TKA1 542 aa19.37■□□□□ 0.69
LIG1-216ENST00000598938 DPY19L2P1Q6NXN4 242 aa19.37■□□□□ 0.69
LIG1-216ENST00000598938 CCDC149Q6ZUS6 474 aa19.37■□□□□ 0.69
LIG1-216ENST00000598938 PPM1KQ8N3J5 372 aa19.37■□□□□ 0.69
LIG1-216ENST00000598938 CMASQ8NFW8 434 aaPredicted RBP19.37■□□□□ 0.69
LIG1-216ENST00000598938 MYCBPAPQ8TBZ2 947 aa19.37■□□□□ 0.69
LIG1-216ENST00000598938 WHAMMQ8TF30 809 aa19.37■□□□□ 0.69
LIG1-216ENST00000598938 TNIP3Q96KP6 325 aa19.37■□□□□ 0.69
LIG1-216ENST00000598938 S1PR5Q9H228 398 aa19.37■□□□□ 0.69
LIG1-216ENST00000598938 CRISPLD1Q9H336 500 aa19.37■□□□□ 0.69
LIG1-216ENST00000598938 CYP4F11Q9HBI6 524 aa19.37■□□□□ 0.69
LIG1-216ENST00000598938 SIX2Q9NPC8 291 aa19.37■□□□□ 0.69
LIG1-216ENST00000598938 ZDHHC7Q9NXF8 308 aa19.37■□□□□ 0.69
LIG1-216ENST00000598938 HSFX1Q9UBD0 423 aa19.37■□□□□ 0.69
LIG1-216ENST00000598938 MTCL1Q9Y4B5 1905 aaKnown RBP19.37■□□□□ 0.69
LIG1-216ENST00000598938 GOLGA6L19H0YKK7 550 aa19.36■□□□□ 0.69
LIG1-216ENST00000598938 RFPL2O75678 378 aa19.36■□□□□ 0.69
LIG1-216ENST00000598938 HOXA9P31269 272 aa19.36■□□□□ 0.69
LIG1-216ENST00000598938 ELF1P32519 619 aa19.36■□□□□ 0.69
LIG1-216ENST00000598938 YWHAEP62258 255 aaKnown RBP19.36■□□□□ 0.69
LIG1-216ENST00000598938 MAPRE1Q15691 268 aaKnown RBP19.36■□□□□ 0.69
LIG1-216ENST00000598938 FKBP15Q5T1M5 1219 aa19.36■□□□□ 0.69
LIG1-216ENST00000598938 RRAGAQ7L523 313 aa19.36■□□□□ 0.69
LIG1-216ENST00000598938 CRYBG2Q8N1P7 616 aa19.36■□□□□ 0.69
LIG1-216ENST00000598938 C12orf76Q8N812 135 aaPredicted RBP19.36■□□□□ 0.69
LIG1-216ENST00000598938 ATAD1Q8NBU5 361 aa19.36■□□□□ 0.69
LIG1-216ENST00000598938 B3GALNT2Q8NCR0 500 aa19.36■□□□□ 0.69
LIG1-216ENST00000598938 SLC7A14Q8TBB6 771 aa19.36■□□□□ 0.69
LIG1-216ENST00000598938 SPPL2BQ8TCT7 592 aa19.36■□□□□ 0.69
LIG1-216ENST00000598938 KAT5Q92993 513 aa19.36■□□□□ 0.69
LIG1-216ENST00000598938 RIPOR3Q96MK2 946 aa19.36■□□□□ 0.69
LIG1-216ENST00000598938 TWNKQ96RR1 684 aa19.36■□□□□ 0.69
LIG1-216ENST00000598938 APEX2Q9UBZ4 518 aa19.36■□□□□ 0.69
LIG1-216ENST00000598938 NR2E1Q9Y466 385 aa19.36■□□□□ 0.69
LIG1-216ENST00000598938 PCDHB5Q9Y5E4 795 aa19.36■□□□□ 0.69
LIG1-216ENST00000598938 SPTBN4Q9H254 2564 aa19.35■□□□□ 0.69
LIG1-216ENST00000598938 PRRG1O14668 218 aa19.35■□□□□ 0.69
LIG1-216ENST00000598938 POU2F2P09086 479 aa19.35■□□□□ 0.69
LIG1-216ENST00000598938 HNRNPA1P09651 372 aaKnown RBP eCLIP19.35■□□□□ 0.69
LIG1-216ENST00000598938 ACO1P21399 889 aaKnown RBP19.35■□□□□ 0.69
LIG1-216ENST00000598938 APBA1Q02410 837 aa19.35■□□□□ 0.69
LIG1-216ENST00000598938 DUSP4Q13115 394 aa19.35■□□□□ 0.69
LIG1-216ENST00000598938 MDH1BQ5I0G3 518 aa19.35■□□□□ 0.69
LIG1-216ENST00000598938 PPM1LQ5SGD2 360 aa19.35■□□□□ 0.69
LIG1-216ENST00000598938 ACOT1Q86TX2 421 aa19.35■□□□□ 0.69
LIG1-216ENST00000598938 UBALD2Q8IYN6 164 aa19.35■□□□□ 0.69
LIG1-216ENST00000598938 TTC9BQ8N6N2 239 aa19.35■□□□□ 0.69
LIG1-216ENST00000598938 ATOH1Q92858 354 aaPredicted RBP19.35■□□□□ 0.69
LIG1-216ENST00000598938 MYLPFQ96A32 169 aa19.35■□□□□ 0.69
LIG1-216ENST00000598938 JAKMIP2Q96AA8 810 aa19.35■□□□□ 0.69
LIG1-216ENST00000598938 FUBP3Q96I24 572 aaKnown RBP eCLIP19.35■□□□□ 0.69
LIG1-216ENST00000598938 FAM81BQ96LP2 452 aa19.35■□□□□ 0.69
LIG1-216ENST00000598938 KREMEN1Q96MU8 473 aa19.35■□□□□ 0.69
LIG1-216ENST00000598938 LPIN3Q9BQK8 851 aa19.35■□□□□ 0.69
LIG1-216ENST00000598938 NT5C1AQ9BXI3 368 aa19.35■□□□□ 0.69
LIG1-216ENST00000598938 RHOBTB2Q9BYZ6 727 aa19.35■□□□□ 0.69
LIG1-216ENST00000598938 ELOVL4Q9GZR5 314 aa19.35■□□□□ 0.69
LIG1-216ENST00000598938 ABCB6Q9NP58 842 aa19.35■□□□□ 0.69
LIG1-216ENST00000598938 UBE2TQ9NPD8 197 aaPredicted RBP19.35■□□□□ 0.69
LIG1-216ENST00000598938 ABI2Q9NYB9 513 aaPredicted RBP19.35■□□□□ 0.69
LIG1-216ENST00000598938 INSL5Q9Y5Q6 135 aa19.35■□□□□ 0.69
LIG1-216ENST00000598938 SPDYE4A6NLX3 237 aa19.34■□□□□ 0.69
LIG1-216ENST00000598938 ITIH3Q06033 890 aa19.34■□□□□ 0.69
LIG1-216ENST00000598938 ORC1Q13415 861 aa19.34■□□□□ 0.69
LIG1-216ENST00000598938 CFAP221Q4G0U5 840 aa19.34■□□□□ 0.69
LIG1-216ENST00000598938 RARS2Q5T160 578 aaKnown RBP19.34■□□□□ 0.69
LIG1-216ENST00000598938 GJB7Q6PEY0 223 aa19.34■□□□□ 0.69
LIG1-216ENST00000598938 C4orf50Q6ZRC1 276 aa19.34■□□□□ 0.69
LIG1-216ENST00000598938 ENOSF1Q7L5Y1 443 aa19.34■□□□□ 0.69
LIG1-216ENST00000598938 SPATA2LQ8IUW3 424 aaPredicted RBP19.34■□□□□ 0.69
LIG1-216ENST00000598938 ZNF707Q96C28 371 aaPredicted RBP19.34■□□□□ 0.69
LIG1-216ENST00000598938 PCED1BQ96HM7 432 aa19.34■□□□□ 0.69
LIG1-216ENST00000598938 NECTIN4Q96NY8 510 aa19.34■□□□□ 0.69
LIG1-216ENST00000598938 ADAM7Q9H2U9 754 aa19.34■□□□□ 0.69
LIG1-216ENST00000598938 PLCB1Q9NQ66 1216 aa19.34■□□□□ 0.69
LIG1-216ENST00000598938 RTN4Q9NQC3 1192 aaKnown RBP19.34■□□□□ 0.69
LIG1-216ENST00000598938 FAM86C1Q9NVL1 165 aa19.34■□□□□ 0.69
LIG1-216ENST00000598938 SIK3Q9Y2K2 1263 aa19.34■□□□□ 0.69
LIG1-216ENST00000598938 SLC27A5Q9Y2P5 690 aa19.34■□□□□ 0.69
LIG1-216ENST00000598938 YIPF1Q9Y548 306 aa19.34■□□□□ 0.69
LIG1-216ENST00000598938 A0A1B0GTH6 734 aa19.33■□□□□ 0.68
LIG1-216ENST00000598938 CCDC195A0A1B0GUA6 201 aa19.33■□□□□ 0.68
LIG1-216ENST00000598938 GALR2O43603 387 aaPredicted RBP19.33■□□□□ 0.68
LIG1-216ENST00000598938 HAPLN1P10915 354 aaPredicted RBP19.33■□□□□ 0.68
LIG1-216ENST00000598938 TUFMP49411 452 aaKnown RBP19.33■□□□□ 0.68
LIG1-216ENST00000598938 CDR1P51861 262 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms