RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 NEFLP07196 543 aa10.72□□□□□ -0.69
LIG1-209ENST00000596104 ACAT1P24752 427 aaKnown RBP10.72□□□□□ -0.69
LIG1-209ENST00000596104 CYP2F1P24903 491 aa10.72□□□□□ -0.69
LIG1-209ENST00000596104 POLR2BP30876 1174 aaKnown RBP10.72□□□□□ -0.69
LIG1-209ENST00000596104 LONP1P36776 959 aaKnown RBP10.72□□□□□ -0.69
LIG1-209ENST00000596104 PNPLA4P41247 253 aa10.72□□□□□ -0.69
LIG1-209ENST00000596104 RPL10AP62906 217 aaKnown RBP10.72□□□□□ -0.69
LIG1-209ENST00000596104 KCNA1Q09470 495 aa10.72□□□□□ -0.69
LIG1-209ENST00000596104 ELF2Q15723 593 aa10.72□□□□□ -0.69
LIG1-209ENST00000596104 EML3Q32P44 896 aa10.72□□□□□ -0.69
LIG1-209ENST00000596104 INTS6LQ5JSJ4 861 aaKnown RBP10.72□□□□□ -0.69
LIG1-209ENST00000596104 PSAPL1Q6NUJ1 521 aa10.72□□□□□ -0.69
LIG1-209ENST00000596104 OSTM1Q86WC4 334 aa10.72□□□□□ -0.69
LIG1-209ENST00000596104 SFR1Q86XK3 245 aa10.72□□□□□ -0.69
LIG1-209ENST00000596104 BRSK2Q8IWQ3 736 aa10.72□□□□□ -0.69
LIG1-209ENST00000596104 LRRC52Q8N7C0 313 aa10.72□□□□□ -0.69
LIG1-209ENST00000596104 POMGNT1Q8WZA1 660 aa10.72□□□□□ -0.69
LIG1-209ENST00000596104 CD101Q93033 1021 aa10.72□□□□□ -0.69
LIG1-209ENST00000596104 EXOC4Q96A65 974 aa10.72□□□□□ -0.69
LIG1-209ENST00000596104 ACDQ96AP0 544 aa10.72□□□□□ -0.69
LIG1-209ENST00000596104 HVCN1Q96D96 273 aa10.72□□□□□ -0.69
LIG1-209ENST00000596104 CYP2S1Q96SQ9 504 aa10.72□□□□□ -0.69
LIG1-209ENST00000596104 EDEM2Q9BV94 578 aa10.72□□□□□ -0.69
LIG1-209ENST00000596104 DUS2Q9NX74 493 aaKnown RBP10.72□□□□□ -0.69
LIG1-209ENST00000596104 DDX43Q9NXZ2 648 aaKnown RBP10.72□□□□□ -0.69
LIG1-209ENST00000596104 GCNT4Q9P109 453 aa10.72□□□□□ -0.69
LIG1-209ENST00000596104 UXTQ9UBK9 157 aaPredicted RBP10.72□□□□□ -0.69
LIG1-209ENST00000596104 GTF3C4Q9UKN8 822 aa10.72□□□□□ -0.69
LIG1-209ENST00000596104 TRAV19A0A0A6YYK7 116 aa10.71□□□□□ -0.69
LIG1-209ENST00000596104 H3BQV1 296 aa10.71□□□□□ -0.69
LIG1-209ENST00000596104 GABRDO14764 452 aa10.71□□□□□ -0.69
LIG1-209ENST00000596104 GIPC1O14908 333 aa10.71□□□□□ -0.69
LIG1-209ENST00000596104 HCRTO43612 131 aa10.71□□□□□ -0.69
LIG1-209ENST00000596104 RHOBTB1O94844 696 aa10.71□□□□□ -0.69
LIG1-209ENST00000596104 CAVIN2O95810 425 aa10.71□□□□□ -0.69
LIG1-209ENST00000596104 ITGB3P05106 788 aa10.71□□□□□ -0.69
LIG1-209ENST00000596104 CKMP06732 381 aa10.71□□□□□ -0.69
LIG1-209ENST00000596104 PROS1P07225 676 aa10.71□□□□□ -0.69
LIG1-209ENST00000596104 USP17L7P0C7H9 530 aa10.71□□□□□ -0.69
LIG1-209ENST00000596104 TCF3P15923 654 aa10.71□□□□□ -0.69
LIG1-209ENST00000596104 GJB2P29033 226 aa10.71□□□□□ -0.69
LIG1-209ENST00000596104 SCN1AP35498 2009 aa10.71□□□□□ -0.69
LIG1-209ENST00000596104 DDIT3P35638 169 aa10.71□□□□□ -0.69
LIG1-209ENST00000596104 IFNAR2P48551 515 aa10.71□□□□□ -0.69
LIG1-209ENST00000596104 TFAMQ00059 246 aaKnown RBP10.71□□□□□ -0.69
LIG1-209ENST00000596104 CREB5Q02930 508 aa10.71□□□□□ -0.69
LIG1-209ENST00000596104 POSTNQ15063 836 aa10.71□□□□□ -0.69
LIG1-209ENST00000596104 GAB4Q2WGN9 574 aa10.71□□□□□ -0.69
LIG1-209ENST00000596104 CFAP221Q4G0U5 840 aa10.71□□□□□ -0.69
LIG1-209ENST00000596104 PMS2CLQ68D20 193 aa10.71□□□□□ -0.69
LIG1-209ENST00000596104 USP49Q70CQ1 688 aa10.71□□□□□ -0.69
LIG1-209ENST00000596104 TMEM86AQ8N2M4 240 aa10.71□□□□□ -0.69
LIG1-209ENST00000596104 KRI1Q8N9T8 703 aaKnown RBP10.71□□□□□ -0.69
LIG1-209ENST00000596104 ZSWIM2Q8NEG5 633 aa10.71□□□□□ -0.69
LIG1-209ENST00000596104 ATP2A3Q93084 1043 aa10.71□□□□□ -0.69
LIG1-209ENST00000596104 TMX3Q96JJ7 454 aa10.71□□□□□ -0.69
LIG1-209ENST00000596104 FAM84AQ96KN4 292 aa10.71□□□□□ -0.69
LIG1-209ENST00000596104 FAM213AQ9BRX8 229 aa10.71□□□□□ -0.69
LIG1-209ENST00000596104 TRPC7Q9HCX4 862 aa10.71□□□□□ -0.69
LIG1-209ENST00000596104 GDAP2Q9NXN4 497 aa10.71□□□□□ -0.69
LIG1-209ENST00000596104 AGAP1Q9UPQ3 857 aa10.71□□□□□ -0.69
LIG1-209ENST00000596104 WASF3Q9UPY6 502 aa10.71□□□□□ -0.69
LIG1-209ENST00000596104 GREB1Q4ZG55 1949 aa10.7□□□□□ -0.7
LIG1-209ENST00000596104 LNP1A1A4G5 178 aa10.7□□□□□ -0.7
LIG1-209ENST00000596104 C2orf78A6NCI8 922 aa10.7□□□□□ -0.7
LIG1-209ENST00000596104 ANTXRLA6NF34 631 aa10.7□□□□□ -0.7
LIG1-209ENST00000596104 C4orf47A7E2U8 309 aa10.7□□□□□ -0.7
LIG1-209ENST00000596104 HUS1O60921 280 aa10.7□□□□□ -0.7
LIG1-209ENST00000596104 CD2BP2O95400 341 aaKnown RBP10.7□□□□□ -0.7
LIG1-209ENST00000596104 BMP15O95972 392 aa10.7□□□□□ -0.7
LIG1-209ENST00000596104 CHRM1P11229 460 aaPredicted RBP10.7□□□□□ -0.7
LIG1-209ENST00000596104 OPRD1P41143 372 aa10.7□□□□□ -0.7
LIG1-209ENST00000596104 NOVA1P51513 510 aaKnown RBP10.7□□□□□ -0.7
LIG1-209ENST00000596104 DGKEP52429 567 aa10.7□□□□□ -0.7
LIG1-209ENST00000596104 ZXDBP98169 803 aa10.7□□□□□ -0.7
LIG1-209ENST00000596104 MYL7Q01449 175 aa10.7□□□□□ -0.7
LIG1-209ENST00000596104 DYMQ7RTS9 669 aa10.7□□□□□ -0.7
LIG1-209ENST00000596104 LIMS2Q7Z4I7 341 aa10.7□□□□□ -0.7
LIG1-209ENST00000596104 RASSF3Q86WH2 238 aa10.7□□□□□ -0.7
LIG1-209ENST00000596104 ARL14EPQ8N8R7 260 aaPredicted RBP10.7□□□□□ -0.7
LIG1-209ENST00000596104 RASSF8Q8NHQ8 419 aa10.7□□□□□ -0.7
LIG1-209ENST00000596104 SPATA18Q8TC71 538 aa10.7□□□□□ -0.7
LIG1-209ENST00000596104 SH3RF2Q8TEC5 729 aa10.7□□□□□ -0.7
LIG1-209ENST00000596104 USP33Q8TEY7 942 aa10.7□□□□□ -0.7
LIG1-209ENST00000596104 SAAL1Q96ER3 474 aa10.7□□□□□ -0.7
LIG1-209ENST00000596104 FUBP3Q96I24 572 aaKnown RBP eCLIP10.7□□□□□ -0.7
LIG1-209ENST00000596104 LINC00597Q9H2U6 94 aa10.7□□□□□ -0.7
LIG1-209ENST00000596104 SEL1LQ9UBV2 794 aa10.7□□□□□ -0.7
LIG1-209ENST00000596104 SIX4Q9UIU6 781 aa10.7□□□□□ -0.7
LIG1-209ENST00000596104 RALYQ9UKM9 306 aaKnown RBP10.7□□□□□ -0.7
LIG1-209ENST00000596104 ARHGAP26Q9UNA1 814 aa10.7□□□□□ -0.7
LIG1-209ENST00000596104 INVSQ9Y283 1065 aa10.7□□□□□ -0.7
LIG1-209ENST00000596104 MYMKA6NI61 221 aa10.69□□□□□ -0.7
LIG1-209ENST00000596104 C1QTNF9BB2RNN3 333 aa10.69□□□□□ -0.7
LIG1-209ENST00000596104 K7EQS6 105 aa10.69□□□□□ -0.7
LIG1-209ENST00000596104 CDX4O14627 284 aaPredicted RBP10.69□□□□□ -0.7
LIG1-209ENST00000596104 C1QTNF9P0C862 333 aa10.69□□□□□ -0.7
LIG1-209ENST00000596104 BCKDHBP21953 392 aa10.69□□□□□ -0.7
LIG1-209ENST00000596104 PCSK1P29120 753 aa10.69□□□□□ -0.7
LIG1-209ENST00000596104 GBP1P32455 592 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms