RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 MTA2O94776 668 aa15.61■□□□□ 0.09
SHKBP1-211ENST00000595945 TUBB4AP04350 444 aa15.61■□□□□ 0.09
SHKBP1-211ENST00000595945 ABCB4P21439 1286 aa15.61■□□□□ 0.09
SHKBP1-211ENST00000595945 RPL34P49207 117 aaKnown RBP15.61■□□□□ 0.09
SHKBP1-211ENST00000595945 HADHBP55084 474 aaKnown RBP15.61■□□□□ 0.09
SHKBP1-211ENST00000595945 ETF1P62495 437 aaKnown RBP15.61■□□□□ 0.09
SHKBP1-211ENST00000595945 PLCB3Q01970 1234 aa15.61■□□□□ 0.09
SHKBP1-211ENST00000595945 YWHAHQ04917 246 aaPredicted RBP15.61■□□□□ 0.09
SHKBP1-211ENST00000595945 MDH1BQ5I0G3 518 aa15.61■□□□□ 0.09
SHKBP1-211ENST00000595945 VARS2Q5ST30 1063 aaKnown RBP15.61■□□□□ 0.09
SHKBP1-211ENST00000595945 FAM171A1Q5VUB5 890 aa15.61■□□□□ 0.09
SHKBP1-211ENST00000595945 HERC6Q8IVU3 1022 aa15.61■□□□□ 0.09
SHKBP1-211ENST00000595945 THEM5Q8N1Q8 247 aa15.61■□□□□ 0.09
SHKBP1-211ENST00000595945 ANKRD52Q8NB46 1076 aa15.61■□□□□ 0.09
SHKBP1-211ENST00000595945 MYCBPAPQ8TBZ2 947 aa15.61■□□□□ 0.09
SHKBP1-211ENST00000595945 SLC2A14Q8TDB8 520 aa15.61■□□□□ 0.09
SHKBP1-211ENST00000595945 RFFLQ8WZ73 363 aa15.61■□□□□ 0.09
SHKBP1-211ENST00000595945 SECISBP2LQ93073 1101 aaKnown RBP15.61■□□□□ 0.09
SHKBP1-211ENST00000595945 TRIM11Q96F44 468 aa15.61■□□□□ 0.09
SHKBP1-211ENST00000595945 C16orf45Q96MC5 204 aaPredicted RBP15.61■□□□□ 0.09
SHKBP1-211ENST00000595945 YME1L1Q96TA2 773 aa15.61■□□□□ 0.09
SHKBP1-211ENST00000595945 B3GNT5Q9BYG0 378 aa15.61■□□□□ 0.09
SHKBP1-211ENST00000595945 IRX2Q9BZI1 471 aaPredicted RBP15.61■□□□□ 0.09
SHKBP1-211ENST00000595945 CEP83Q9Y592 693 aa15.61■□□□□ 0.09
SHKBP1-211ENST00000595945 PAXBP1Q9Y5B6 917 aa15.61■□□□□ 0.09
SHKBP1-211ENST00000595945 SLC4A7Q9Y6M7 1214 aa15.61■□□□□ 0.09
SHKBP1-211ENST00000595945 GREB1Q4ZG55 1949 aa15.6■□□□□ 0.09
SHKBP1-211ENST00000595945 TCRBV5S1A1TA0A578 114 aa15.6■□□□□ 0.09
SHKBP1-211ENST00000595945 FAM170AA1A519 330 aa15.6■□□□□ 0.09
SHKBP1-211ENST00000595945 CALB1P05937 261 aa15.6■□□□□ 0.09
SHKBP1-211ENST00000595945 ADORA2BP29275 332 aa15.6■□□□□ 0.09
SHKBP1-211ENST00000595945 GABRB2P47870 512 aa15.6■□□□□ 0.09
SHKBP1-211ENST00000595945 GSCP56915 257 aaPredicted RBP15.6■□□□□ 0.09
SHKBP1-211ENST00000595945 PTPN20Q4JDL3 420 aa15.6■□□□□ 0.09
SHKBP1-211ENST00000595945 MMS22LQ6ZRQ5 1243 aa15.6■□□□□ 0.09
SHKBP1-211ENST00000595945 TAS1R1Q7RTX1 841 aa15.6■□□□□ 0.09
SHKBP1-211ENST00000595945 LRRTM3Q86VH5 581 aa15.6■□□□□ 0.09
SHKBP1-211ENST00000595945 UBA3Q8TBC4 463 aa15.6■□□□□ 0.09
SHKBP1-211ENST00000595945 STK32AQ8WU08 396 aa15.6■□□□□ 0.09
SHKBP1-211ENST00000595945 SLC35F5Q8WV83 523 aa15.6■□□□□ 0.09
SHKBP1-211ENST00000595945 CLP1Q92989 425 aaKnown RBP15.6■□□□□ 0.09
SHKBP1-211ENST00000595945 ZNF653Q96CK0 615 aa15.6■□□□□ 0.09
SHKBP1-211ENST00000595945 TMEM209Q96SK2 561 aa15.6■□□□□ 0.09
SHKBP1-211ENST00000595945 C11orf70Q9BRQ4 267 aa15.6■□□□□ 0.09
SHKBP1-211ENST00000595945 ZCWPW1Q9H0M4 648 aa15.6■□□□□ 0.09
SHKBP1-211ENST00000595945 MTIF3Q9H2K0 278 aaKnown RBP15.6■□□□□ 0.09
SHKBP1-211ENST00000595945 ADAM22Q9P0K1 906 aa15.6■□□□□ 0.09
SHKBP1-211ENST00000595945 HESX1Q9UBX0 185 aa15.6■□□□□ 0.09
SHKBP1-211ENST00000595945 INSL6Q9Y581 213 aa15.6■□□□□ 0.09
SHKBP1-211ENST00000595945 ZNF638Q14966 1978 aaKnown RBP15.6■□□□□ 0.09
SHKBP1-211ENST00000595945 MACROD2A1Z1Q3 448 aa15.59■□□□□ 0.09
SHKBP1-211ENST00000595945 OR6C75A6NL08 312 aa15.59■□□□□ 0.09
SHKBP1-211ENST00000595945 FANCGO15287 622 aa15.59■□□□□ 0.09
SHKBP1-211ENST00000595945 KIF5CO60282 957 aa15.59■□□□□ 0.09
SHKBP1-211ENST00000595945 MOCS3O95396 460 aa15.59■□□□□ 0.09
SHKBP1-211ENST00000595945 TNNT1P13805 278 aa15.59■□□□□ 0.09
SHKBP1-211ENST00000595945 RRM1P23921 792 aa15.59■□□□□ 0.09
SHKBP1-211ENST00000595945 BCAT1P54687 386 aa15.59■□□□□ 0.09
SHKBP1-211ENST00000595945 TSPY1Q01534 308 aa15.59■□□□□ 0.09
SHKBP1-211ENST00000595945 PDE4CQ08493 712 aa15.59■□□□□ 0.09
SHKBP1-211ENST00000595945 BST2Q10589 180 aaKnown RBP15.59■□□□□ 0.09
SHKBP1-211ENST00000595945 PDCLQ13371 301 aa15.59■□□□□ 0.09
SHKBP1-211ENST00000595945 RTP2Q5QGT7 225 aa15.59■□□□□ 0.09
SHKBP1-211ENST00000595945 SPOUT1Q5T280 376 aaKnown RBP15.59■□□□□ 0.09
SHKBP1-211ENST00000595945 PLEKHA7Q6IQ23 1121 aa15.59■□□□□ 0.09
SHKBP1-211ENST00000595945 FAM35AQ86V20 835 aa15.59■□□□□ 0.09
SHKBP1-211ENST00000595945 ERICH1Q86X53 443 aa15.59■□□□□ 0.09
SHKBP1-211ENST00000595945 RHOT2Q8IXI1 618 aa15.59■□□□□ 0.09
SHKBP1-211ENST00000595945 SLC35G2Q8TBE7 412 aa15.59■□□□□ 0.09
SHKBP1-211ENST00000595945 PCED1BQ96HM7 432 aa15.59■□□□□ 0.09
SHKBP1-211ENST00000595945 WDR24Q96S15 920 aa15.59■□□□□ 0.09
SHKBP1-211ENST00000595945 CPXM1Q96SM3 734 aa15.59■□□□□ 0.09
SHKBP1-211ENST00000595945 RAD9AQ99638 391 aa15.59■□□□□ 0.09
SHKBP1-211ENST00000595945 TTPALQ9BTX7 342 aa15.59■□□□□ 0.09
SHKBP1-211ENST00000595945 HERC2P3Q9BVR0 1158 aa15.59■□□□□ 0.09
SHKBP1-211ENST00000595945 SLC4A5Q9BY07 1137 aa15.59■□□□□ 0.09
SHKBP1-211ENST00000595945 DUSP16Q9BY84 665 aa15.59■□□□□ 0.09
SHKBP1-211ENST00000595945 CHST7Q9NS84 486 aa15.59■□□□□ 0.09
SHKBP1-211ENST00000595945 TMLHEQ9NVH6 421 aa15.59■□□□□ 0.09
SHKBP1-211ENST00000595945 SPG21Q9NZD8 308 aa15.59■□□□□ 0.09
SHKBP1-211ENST00000595945 CNOT8Q9UFF9 292 aaKnown RBP15.59■□□□□ 0.09
SHKBP1-211ENST00000595945 COG5Q9UP83 839 aa15.59■□□□□ 0.09
SHKBP1-211ENST00000595945 NR2E3Q9Y5X4 410 aa15.59■□□□□ 0.09
SHKBP1-211ENST00000595945 CAPN6Q9Y6Q1 641 aa15.59■□□□□ 0.09
SHKBP1-211ENST00000595945 TULP2O00295 520 aa15.58■□□□□ 0.08
SHKBP1-211ENST00000595945 CLDN5O00501 218 aa15.58■□□□□ 0.08
SHKBP1-211ENST00000595945 ATMINO43313 823 aaPredicted RBP15.58■□□□□ 0.08
SHKBP1-211ENST00000595945 BUB1O43683 1085 aa15.58■□□□□ 0.08
SHKBP1-211ENST00000595945 GABBR2O75899 941 aa15.58■□□□□ 0.08
SHKBP1-211ENST00000595945 ATP2A2P16615 1042 aaKnown RBP15.58■□□□□ 0.08
SHKBP1-211ENST00000595945 MAGEA10P43363 369 aaPredicted RBP15.58■□□□□ 0.08
SHKBP1-211ENST00000595945 PLA2G4AP47712 749 aa15.58■□□□□ 0.08
SHKBP1-211ENST00000595945 GNG11P61952 73 aa15.58■□□□□ 0.08
SHKBP1-211ENST00000595945 MAPRE1Q15691 268 aaKnown RBP15.58■□□□□ 0.08
SHKBP1-211ENST00000595945 USP41Q3LFD5 358 aa15.58■□□□□ 0.08
SHKBP1-211ENST00000595945 CTXN3Q4LDR2 81 aa15.58■□□□□ 0.08
SHKBP1-211ENST00000595945 C2CD6Q53TS8 623 aa15.58■□□□□ 0.08
SHKBP1-211ENST00000595945 ZNF569Q5MCW4 686 aa15.58■□□□□ 0.08
SHKBP1-211ENST00000595945 LIN9Q5TKA1 542 aa15.58■□□□□ 0.08
SHKBP1-211ENST00000595945 ZNF280DQ6N043 979 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms