RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 FLT3P36888 993 aa17.99■□□□□ 0.47
SHKBP1-205ENST00000594973 CDH8P55286 799 aa17.99■□□□□ 0.47
SHKBP1-205ENST00000594973 HUNKP57058 714 aa17.99■□□□□ 0.47
SHKBP1-205ENST00000594973 TNFAIP2Q03169 654 aa17.99■□□□□ 0.47
SHKBP1-205ENST00000594973 ORC1Q13415 861 aa17.99■□□□□ 0.47
SHKBP1-205ENST00000594973 LBRQ14739 615 aaKnown RBP17.99■□□□□ 0.47
SHKBP1-205ENST00000594973 TAF11Q15544 211 aa17.99■□□□□ 0.47
SHKBP1-205ENST00000594973 FAM187BQ17R55 369 aa17.99■□□□□ 0.47
SHKBP1-205ENST00000594973 ERICH1Q86X53 443 aa17.99■□□□□ 0.47
SHKBP1-205ENST00000594973 LRRC34Q8IZ02 419 aa17.99■□□□□ 0.47
SHKBP1-205ENST00000594973 TFAP2BQ92481 460 aa17.99■□□□□ 0.47
SHKBP1-205ENST00000594973 FAM49AQ9H0Q0 323 aaPredicted RBP17.99■□□□□ 0.47
SHKBP1-205ENST00000594973 USTQ9Y2C2 406 aa17.99■□□□□ 0.47
SHKBP1-205ENST00000594973 LRRC42Q9Y546 428 aa17.99■□□□□ 0.47
SHKBP1-205ENST00000594973 COL1A2P08123 1366 aa17.99■□□□□ 0.47
SHKBP1-205ENST00000594973 E7ENQ6 273 aa17.98■□□□□ 0.47
SHKBP1-205ENST00000594973 O00370 1275 aa17.98■□□□□ 0.47
SHKBP1-205ENST00000594973 IGF2BP3O00425 579 aaKnown RBP eCLIP17.98■□□□□ 0.47
SHKBP1-205ENST00000594973 TLR3O15455 904 aaKnown RBP17.98■□□□□ 0.47
SHKBP1-205ENST00000594973 PPFIA2O75334 1257 aa17.98■□□□□ 0.47
SHKBP1-205ENST00000594973 CDC25CP30307 473 aa17.98■□□□□ 0.47
SHKBP1-205ENST00000594973 PTP4A2Q12974 167 aa17.98■□□□□ 0.47
SHKBP1-205ENST00000594973 PPP2R5EQ16537 467 aa17.98■□□□□ 0.47
SHKBP1-205ENST00000594973 TTC27Q6P3X3 843 aa17.98■□□□□ 0.47
SHKBP1-205ENST00000594973 CROCCP2Q86T23 111 aa17.98■□□□□ 0.47
SHKBP1-205ENST00000594973 JAMLQ86YT9 394 aa17.98■□□□□ 0.47
SHKBP1-205ENST00000594973 KIAA0319LQ8IZA0 1049 aa17.98■□□□□ 0.47
SHKBP1-205ENST00000594973 ELAC2Q9BQ52 826 aaKnown RBP17.98■□□□□ 0.47
SHKBP1-205ENST00000594973 MRPL47Q9HD33 250 aaKnown RBP17.98■□□□□ 0.47
SHKBP1-205ENST00000594973 SMIM24O75264 130 aa17.98■□□□□ 0.47
SHKBP1-205ENST00000594973 UBOX5O94941 541 aa17.98■□□□□ 0.47
SHKBP1-205ENST00000594973 GNAT1P11488 350 aa17.98■□□□□ 0.47
SHKBP1-205ENST00000594973 CD19P15391 556 aa17.98■□□□□ 0.47
SHKBP1-205ENST00000594973 HSPA6P17066 643 aa17.98■□□□□ 0.47
SHKBP1-205ENST00000594973 GJC1P36383 396 aa17.98■□□□□ 0.47
SHKBP1-205ENST00000594973 COPS2P61201 443 aa17.98■□□□□ 0.47
SHKBP1-205ENST00000594973 C1QBPQ07021 282 aaKnown RBP17.98■□□□□ 0.47
SHKBP1-205ENST00000594973 BNIP1Q12981 228 aa17.98■□□□□ 0.47
SHKBP1-205ENST00000594973 CCDC137Q6PK04 289 aaKnown RBP17.98■□□□□ 0.47
SHKBP1-205ENST00000594973 PLCD4Q9BRC7 762 aa17.98■□□□□ 0.47
SHKBP1-205ENST00000594973 ERP44Q9BS26 406 aa17.98■□□□□ 0.47
SHKBP1-205ENST00000594973 MTUS1Q9ULD2 1270 aa17.98■□□□□ 0.47
SHKBP1-205ENST00000594973 PTPN22Q9Y2R2 807 aa17.98■□□□□ 0.47
SHKBP1-205ENST00000594973 TSPAN1O60635 241 aa17.97■□□□□ 0.47
SHKBP1-205ENST00000594973 PROSCO94903 275 aa17.97■□□□□ 0.47
SHKBP1-205ENST00000594973 NUDT17P0C025 328 aa17.97■□□□□ 0.47
SHKBP1-205ENST00000594973 MMP8P22894 467 aa17.97■□□□□ 0.47
SHKBP1-205ENST00000594973 CHRNA3P32297 505 aa17.97■□□□□ 0.47
SHKBP1-205ENST00000594973 SLC1A1P43005 524 aa17.97■□□□□ 0.47
SHKBP1-205ENST00000594973 MSH2P43246 934 aa17.97■□□□□ 0.47
SHKBP1-205ENST00000594973 RPL7AP62424 266 aaKnown RBP17.97■□□□□ 0.47
SHKBP1-205ENST00000594973 DHX9Q08211 1270 aaKnown RBP17.97■□□□□ 0.47
SHKBP1-205ENST00000594973 TBC1D25Q3MII6 688 aa17.97■□□□□ 0.47
SHKBP1-205ENST00000594973 ZNF667Q5HYK9 610 aa17.97■□□□□ 0.47
SHKBP1-205ENST00000594973 IQSEC1Q6DN90 963 aa17.97■□□□□ 0.47
SHKBP1-205ENST00000594973 IFNLR1Q8IU57 520 aaPredicted RBP17.97■□□□□ 0.47
SHKBP1-205ENST00000594973 LMNTD2Q8IXW0 634 aa17.97■□□□□ 0.47
SHKBP1-205ENST00000594973 KLHL29Q96CT2 875 aa17.97■□□□□ 0.47
SHKBP1-205ENST00000594973 VCPIP1Q96JH7 1222 aa17.97■□□□□ 0.47
SHKBP1-205ENST00000594973 TXLNGYQ9BZA5 131 aa17.97■□□□□ 0.47
SHKBP1-205ENST00000594973 ABCF3Q9NUQ8 709 aa17.97■□□□□ 0.47
SHKBP1-205ENST00000594973 SLC15A5A6NIM6 579 aa17.97■□□□□ 0.47
SHKBP1-205ENST00000594973 TTC36A6NLP5 189 aa17.97■□□□□ 0.47
SHKBP1-205ENST00000594973 OAS1P00973 400 aaKnown RBP17.97■□□□□ 0.47
SHKBP1-205ENST00000594973 KCNJ1P48048 391 aa17.97■□□□□ 0.47
SHKBP1-205ENST00000594973 PPARDQ03181 441 aa17.97■□□□□ 0.47
SHKBP1-205ENST00000594973 DHX34Q14147 1143 aaKnown RBP17.97■□□□□ 0.47
SHKBP1-205ENST00000594973 SLC10A6Q3KNW5 377 aa17.97■□□□□ 0.47
SHKBP1-205ENST00000594973 PLEKHA7Q6IQ23 1121 aa17.97■□□□□ 0.47
SHKBP1-205ENST00000594973 SMYD3Q9H7B4 428 aa17.97■□□□□ 0.47
SHKBP1-205ENST00000594973 PARVAQ9NVD7 372 aa17.97■□□□□ 0.47
SHKBP1-205ENST00000594973 SNX24Q9Y343 169 aa17.97■□□□□ 0.47
SHKBP1-205ENST00000594973 ASB3Q9Y575 518 aa17.97■□□□□ 0.47
SHKBP1-205ENST00000594973 SCINQ9Y6U3 715 aa17.97■□□□□ 0.47
SHKBP1-205ENST00000594973 DPPA5A6NC42 116 aa17.96■□□□□ 0.47
SHKBP1-205ENST00000594973 SNX3O60493 162 aa17.96■□□□□ 0.47
SHKBP1-205ENST00000594973 CAND2O75155 1236 aa17.96■□□□□ 0.47
SHKBP1-205ENST00000594973 CCDC105Q8IYK2 499 aa17.96■□□□□ 0.47
SHKBP1-205ENST00000594973 TMEM35BQ8NCS4 154 aa17.96■□□□□ 0.47
SHKBP1-205ENST00000594973 C1orf54Q8WWF1 131 aa17.96■□□□□ 0.47
SHKBP1-205ENST00000594973 PLVAPQ9BX97 442 aa17.96■□□□□ 0.47
SHKBP1-205ENST00000594973 ADAM7Q9H2U9 754 aa17.96■□□□□ 0.47
SHKBP1-205ENST00000594973 INTS9Q9NV88 658 aaKnown RBP17.96■□□□□ 0.47
SHKBP1-205ENST00000594973 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.96■□□□□ 0.47
SHKBP1-205ENST00000594973 SIX1Q15475 284 aaPredicted RBP17.95■□□□□ 0.46
SHKBP1-205ENST00000594973 CYP4A22Q5TCH4 519 aa17.95■□□□□ 0.46
SHKBP1-205ENST00000594973 DUPD1Q68J44 220 aa17.95■□□□□ 0.46
SHKBP1-205ENST00000594973 ASRGL1Q7L266 308 aa17.95■□□□□ 0.46
SHKBP1-205ENST00000594973 WDTC1Q8N5D0 677 aa17.95■□□□□ 0.46
SHKBP1-205ENST00000594973 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.95■□□□□ 0.46
SHKBP1-205ENST00000594973 SDCBP2Q9H190 292 aa17.95■□□□□ 0.46
SHKBP1-205ENST00000594973 FLRT1Q9NZU1 646 aa17.95■□□□□ 0.46
SHKBP1-205ENST00000594973 CTNNAL1Q9UBT7 734 aa17.95■□□□□ 0.46
SHKBP1-205ENST00000594973 RASAL2Q9UJF2 1139 aa17.95■□□□□ 0.46
SHKBP1-205ENST00000594973 KRT16P08779 473 aa17.95■□□□□ 0.46
SHKBP1-205ENST00000594973 POLR2BP30876 1174 aaKnown RBP17.95■□□□□ 0.46
SHKBP1-205ENST00000594973 PTGIRP43119 386 aa17.95■□□□□ 0.46
SHKBP1-205ENST00000594973 TAS2R40P59535 323 aa17.95■□□□□ 0.46
SHKBP1-205ENST00000594973 LAMB3Q13751 1172 aa17.95■□□□□ 0.46
SHKBP1-205ENST00000594973 FEZF2Q8TBJ5 459 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms