RNA–Protein interactions for RNA: ENST00000594814.5

LRIT3-202, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRIT3, Length 3,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-202ENST00000594814 TNFAIP8O95379 198 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 PCP11498 1178 aaKnown RBP4.59□□□□□ -1.67
LRIT3-202ENST00000594814 SLC5A1P13866 664 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 UQCRBP14927 111 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 NPR1P16066 1061 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 OSBPP22059 807 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 VARSP26640 1264 aaKnown RBP4.59□□□□□ -1.67
LRIT3-202ENST00000594814 HALP42357 657 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 GUCY2FP51841 1108 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 RPS3AP61247 264 aaKnown RBP4.59□□□□□ -1.67
LRIT3-202ENST00000594814 NKX3-2P78367 333 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 LPIN1Q14693 890 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 MAN2A1Q16706 1144 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 ZC3H12BQ5HYM0 836 aaKnown RBP4.59□□□□□ -1.67
LRIT3-202ENST00000594814 GALNT17Q6IS24 598 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 ZC3H18Q86VM9 953 aaKnown RBP4.59□□□□□ -1.67
LRIT3-202ENST00000594814 RBM15BQ8NDT2 890 aaKnown RBP4.59□□□□□ -1.67
LRIT3-202ENST00000594814 SH3RF3Q8TEJ3 882 aaPredicted RBP4.59□□□□□ -1.67
LRIT3-202ENST00000594814 ANKRD49Q8WVL7 239 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 DPF3Q92784 378 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 TMA16Q96EY4 203 aaKnown RBP4.59□□□□□ -1.67
LRIT3-202ENST00000594814 AK8Q96MA6 479 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 NLRP4Q96MN2 994 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 TCF12Q99081 682 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 KRT12Q99456 494 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 PSD2Q9BQI7 771 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 SARGQ9BW04 601 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 CRNKL1Q9BZJ0 848 aaKnown RBP4.59□□□□□ -1.67
LRIT3-202ENST00000594814 NACAP1Q9BZK3 213 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 LACRTQ9GZZ8 138 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 STN1Q9H668 368 aaKnown RBP4.59□□□□□ -1.67
LRIT3-202ENST00000594814 PIDD1Q9HB75 910 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 ARMC1Q9NVT9 282 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 GID8Q9NWU2 228 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 LRWD1Q9UFC0 647 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 SEPT3Q9UH03 358 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 PCYOX1Q9UHG3 505 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 FZD1Q9UP38 647 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 CTNND2Q9UQB3 1225 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 RABGAP1Q9Y3P9 1069 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 IKBKGQ9Y6K9 419 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 CDH23Q9H251 3354 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 KIF28PB7ZC32 967 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 DDX3XO00571 662 aaKnown RBP eCLIP4.59□□□□□ -1.67
LRIT3-202ENST00000594814 RGS13O14921 159 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 SOCS5O75159 536 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 CNOT3O75175 753 aaKnown RBP4.59□□□□□ -1.67
LRIT3-202ENST00000594814 NTRK1P04629 796 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 PDHA1P08559 390 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 ACAT1P24752 427 aaKnown RBP4.59□□□□□ -1.67
LRIT3-202ENST00000594814 CSTF2P33240 577 aaKnown RBP eCLIP4.59□□□□□ -1.67
LRIT3-202ENST00000594814 TMED10P49755 219 aaKnown RBP4.59□□□□□ -1.67
LRIT3-202ENST00000594814 METAP2P50579 478 aaKnown RBP eCLIP4.59□□□□□ -1.67
LRIT3-202ENST00000594814 EMP3P54852 163 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 RELAQ04206 551 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 GBE1Q04446 702 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 NFIAQ12857 509 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 SLC18A3Q16572 532 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 ZNF568Q3ZCX4 644 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 NDUFAF5Q5TEU4 345 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 IRAK1BP1Q5VVH5 260 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 RRAGBQ5VZM2 374 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 VPS36Q86VN1 386 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 LONP2Q86WA8 852 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 RGL4Q8IZJ4 473 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 AFAP1L2Q8N4X5 818 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 FITM2Q8N6M3 262 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 SLC44A5Q8NCS7 719 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 ZNF420Q8TAQ5 688 aaPredicted RBP4.59□□□□□ -1.67
LRIT3-202ENST00000594814 GSDMBQ8TAX9 411 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 CHAC2Q8WUX2 184 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 CPLX3Q8WVH0 158 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 ATL1Q8WXF7 558 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 SHISA4Q96DD7 197 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 CCDC138Q96M89 665 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 ERP44Q9BS26 406 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 TBC1D10AQ9BXI6 508 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 RNF26Q9BY78 433 aaPredicted RBP4.59□□□□□ -1.67
LRIT3-202ENST00000594814 C8orf4Q9NR00 106 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 NDE1Q9NXR1 346 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 SEPT10Q9P0V9 454 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 WHRNQ9P202 907 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 LAMP5Q9UJQ1 280 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 MTO1Q9Y2Z2 717 aaKnown RBP4.59□□□□□ -1.67
LRIT3-202ENST00000594814 UBE4BO95155 1302 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 XDHP47989 1333 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 SYNGAP1Q96PV0 1343 aa4.59□□□□□ -1.67
LRIT3-202ENST00000594814 KLF18A0A0U1RQI7 1052 aa4.59□□□□□ -1.68
LRIT3-202ENST00000594814 FADS2P1A8MWK0 482 aa4.59□□□□□ -1.68
LRIT3-202ENST00000594814 K7ENM7 598 aa4.59□□□□□ -1.68
LRIT3-202ENST00000594814 ZNF185O15231 689 aa4.59□□□□□ -1.68
LRIT3-202ENST00000594814 PRDM1O75626 825 aa4.59□□□□□ -1.68
LRIT3-202ENST00000594814 SCGB1D2O95969 90 aa4.59□□□□□ -1.68
LRIT3-202ENST00000594814 USP17L8P0C7I0 530 aa4.59□□□□□ -1.68
LRIT3-202ENST00000594814 VEGFAP15692 232 aaPredicted RBP4.59□□□□□ -1.68
LRIT3-202ENST00000594814 TSHRP16473 764 aa4.59□□□□□ -1.68
LRIT3-202ENST00000594814 CCNCP24863 283 aa4.59□□□□□ -1.68
LRIT3-202ENST00000594814 HMOX2P30519 316 aa4.59□□□□□ -1.68
LRIT3-202ENST00000594814 TUBP50607 506 aa4.59□□□□□ -1.68
LRIT3-202ENST00000594814 RTP1P59025 263 aa4.59□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms