RNA–Protein interactions for RNA: ENST00000594372.1

SIN3B-204, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 3

Gene SIN3B, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-204ENST00000594372 SPPL2BQ8TCT7 592 aa13.2□□□□□ -0.3
SIN3B-204ENST00000594372 MRPS31Q92665 395 aaKnown RBP13.2□□□□□ -0.3
SIN3B-204ENST00000594372 SAAL1Q96ER3 474 aa13.2□□□□□ -0.3
SIN3B-204ENST00000594372 ZC3H10Q96K80 434 aaKnown RBP13.2□□□□□ -0.3
SIN3B-204ENST00000594372 KIF2CQ99661 725 aa13.2□□□□□ -0.3
SIN3B-204ENST00000594372 ECT2Q9H8V3 914 aa13.2□□□□□ -0.3
SIN3B-204ENST00000594372 FSCN3Q9NQT6 498 aa13.2□□□□□ -0.3
SIN3B-204ENST00000594372 DUS2Q9NX74 493 aaKnown RBP13.2□□□□□ -0.3
SIN3B-204ENST00000594372 CIZ1Q9ULV3 898 aaPredicted RBP13.2□□□□□ -0.3
SIN3B-204ENST00000594372 L1RE1Q9UN81 338 aa13.2□□□□□ -0.3
SIN3B-204ENST00000594372 PCDHB5Q9Y5E4 795 aa13.2□□□□□ -0.3
SIN3B-204ENST00000594372 DMXL2Q8TDJ6 3036 aa13.19□□□□□ -0.3
SIN3B-204ENST00000594372 BCLAF3A2AJT9 711 aaKnown RBP13.19□□□□□ -0.3
SIN3B-204ENST00000594372 FOXD2O60548 495 aaPredicted RBP13.19□□□□□ -0.3
SIN3B-204ENST00000594372 ATG13O75143 517 aa13.19□□□□□ -0.3
SIN3B-204ENST00000594372 APBB3O95704 486 aa13.19□□□□□ -0.3
SIN3B-204ENST00000594372 HNRNPLP14866 589 aaKnown RBP eCLIP13.19□□□□□ -0.3
SIN3B-204ENST00000594372 POLR2BP30876 1174 aaKnown RBP13.19□□□□□ -0.3
SIN3B-204ENST00000594372 KCNA1Q09470 495 aa13.19□□□□□ -0.3
SIN3B-204ENST00000594372 MESP2Q0VG99 397 aa13.19□□□□□ -0.3
SIN3B-204ENST00000594372 ZNF77Q15935 545 aa13.19□□□□□ -0.3
SIN3B-204ENST00000594372 EML3Q32P44 896 aa13.19□□□□□ -0.3
SIN3B-204ENST00000594372 LMBRD2Q68DH5 695 aaPredicted RBP13.19□□□□□ -0.3
SIN3B-204ENST00000594372 ANO7Q6IWH7 933 aa13.19□□□□□ -0.3
SIN3B-204ENST00000594372 MON1AQ86VX9 555 aa13.19□□□□□ -0.3
SIN3B-204ENST00000594372 SCN4BQ8IWT1 228 aa13.19□□□□□ -0.3
SIN3B-204ENST00000594372 PDCL2Q8N4E4 241 aa13.19□□□□□ -0.3
SIN3B-204ENST00000594372 ARL14EPQ8N8R7 260 aaPredicted RBP13.19□□□□□ -0.3
SIN3B-204ENST00000594372 NOC3LQ8WTT2 800 aaKnown RBP13.19□□□□□ -0.3
SIN3B-204ENST00000594372 RLN3Q8WXF3 142 aa13.19□□□□□ -0.3
SIN3B-204ENST00000594372 CD101Q93033 1021 aa13.19□□□□□ -0.3
SIN3B-204ENST00000594372 ERLEC1Q96DZ1 483 aa13.19□□□□□ -0.3
SIN3B-204ENST00000594372 PARVGQ9HBI0 331 aa13.19□□□□□ -0.3
SIN3B-204ENST00000594372 TBC1D7Q9P0N9 293 aa13.19□□□□□ -0.3
SIN3B-204ENST00000594372 AGO2Q9UKV8 859 aaKnown RBP13.19□□□□□ -0.3
SIN3B-204ENST00000594372 ATXN2Q99700 1313 aaKnown RBP13.18□□□□□ -0.3
SIN3B-204ENST00000594372 CCDC163A0A0D9SF12 145 aa13.18□□□□□ -0.3
SIN3B-204ENST00000594372 GOLGA8IPA6NC78 632 aa13.18□□□□□ -0.3
SIN3B-204ENST00000594372 GOLGA8JA6NMD2 632 aa13.18□□□□□ -0.3
SIN3B-204ENST00000594372 KPNA7A9QM74 516 aa13.18□□□□□ -0.3
SIN3B-204ENST00000594372 H0YCG3 227 aa13.18□□□□□ -0.3
SIN3B-204ENST00000594372 ATP2C2O75185 946 aa13.18□□□□□ -0.3
SIN3B-204ENST00000594372 ITGB3P05106 788 aa13.18□□□□□ -0.3
SIN3B-204ENST00000594372 CKMP06732 381 aa13.18□□□□□ -0.3
SIN3B-204ENST00000594372 DRD1P21728 446 aa13.18□□□□□ -0.3
SIN3B-204ENST00000594372 ADSSP30520 456 aa13.18□□□□□ -0.3
SIN3B-204ENST00000594372 IFNAR2P48551 515 aa13.18□□□□□ -0.3
SIN3B-204ENST00000594372 ZNF131P52739 623 aa13.18□□□□□ -0.3
SIN3B-204ENST00000594372 ZXDBP98169 803 aa13.18□□□□□ -0.3
SIN3B-204ENST00000594372 TFAMQ00059 246 aaKnown RBP13.18□□□□□ -0.3
SIN3B-204ENST00000594372 USP4Q13107 963 aa13.18□□□□□ -0.3
SIN3B-204ENST00000594372 PTPAQ15257 358 aa13.18□□□□□ -0.3
SIN3B-204ENST00000594372 ELF2Q15723 593 aa13.18□□□□□ -0.3
SIN3B-204ENST00000594372 DYMQ7RTS9 669 aa13.18□□□□□ -0.3
SIN3B-204ENST00000594372 SFR1Q86XK3 245 aa13.18□□□□□ -0.3
SIN3B-204ENST00000594372 CPA6Q8N4T0 437 aa13.18□□□□□ -0.3
SIN3B-204ENST00000594372 DEFB124Q8NES8 71 aa13.18□□□□□ -0.3
SIN3B-204ENST00000594372 TSTD1Q8NFU3 115 aa13.18□□□□□ -0.3
SIN3B-204ENST00000594372 SH3RF2Q8TEC5 729 aa13.18□□□□□ -0.3
SIN3B-204ENST00000594372 RAD54LQ92698 747 aa13.18□□□□□ -0.3
SIN3B-204ENST00000594372 DDX43Q9NXZ2 648 aaKnown RBP13.18□□□□□ -0.3
SIN3B-204ENST00000594372 HSFX1Q9UBD0 423 aa13.18□□□□□ -0.3
SIN3B-204ENST00000594372 DAXXQ9UER7 740 aaPredicted RBP13.18□□□□□ -0.3
SIN3B-204ENST00000594372 GTF3C4Q9UKN8 822 aa13.18□□□□□ -0.3
SIN3B-204ENST00000594372 DSEQ9UL01 958 aa13.18□□□□□ -0.3
SIN3B-204ENST00000594372 ODF2LQ9ULJ1 636 aa13.18□□□□□ -0.3
SIN3B-204ENST00000594372 AGAP1Q9UPQ3 857 aa13.18□□□□□ -0.3
SIN3B-204ENST00000594372 PCDHGA5Q9Y5G8 931 aa13.18□□□□□ -0.3
SIN3B-204ENST00000594372 NBEAQ8NFP9 2946 aa13.18□□□□□ -0.3
SIN3B-204ENST00000594372 TBCAO75347 108 aaKnown RBP13.17□□□□□ -0.3
SIN3B-204ENST00000594372 AKAP3O75969 853 aa13.17□□□□□ -0.3
SIN3B-204ENST00000594372 NOL4O94818 638 aa13.17□□□□□ -0.3
SIN3B-204ENST00000594372 MAPK8P45983 427 aa13.17□□□□□ -0.3
SIN3B-204ENST00000594372 SLC6A11P48066 632 aa13.17□□□□□ -0.3
SIN3B-204ENST00000594372 DHPSP49366 369 aaPredicted RBP13.17□□□□□ -0.3
SIN3B-204ENST00000594372 PSMC1P62191 440 aaKnown RBP13.17□□□□□ -0.3
SIN3B-204ENST00000594372 IRX4P78413 519 aa13.17□□□□□ -0.3
SIN3B-204ENST00000594372 GTF2BQ00403 316 aa13.17□□□□□ -0.3
SIN3B-204ENST00000594372 TSPY1Q01534 308 aa13.17□□□□□ -0.3
SIN3B-204ENST00000594372 PDGFRLQ15198 375 aa13.17□□□□□ -0.3
SIN3B-204ENST00000594372 KYAT1Q16773 422 aa13.17□□□□□ -0.3
SIN3B-204ENST00000594372 SV2CQ496J9 727 aa13.17□□□□□ -0.3
SIN3B-204ENST00000594372 USP49Q70CQ1 688 aa13.17□□□□□ -0.3
SIN3B-204ENST00000594372 SYT13Q7L8C5 426 aa13.17□□□□□ -0.3
SIN3B-204ENST00000594372 CD302Q8IX05 232 aa13.17□□□□□ -0.3
SIN3B-204ENST00000594372 DCP1BQ8IZD4 617 aaKnown RBP13.17□□□□□ -0.3
SIN3B-204ENST00000594372 CAMKK1Q8N5S9 505 aa13.17□□□□□ -0.3
SIN3B-204ENST00000594372 RASSF8Q8NHQ8 419 aa13.17□□□□□ -0.3
SIN3B-204ENST00000594372 OSCP1Q8WVF1 389 aa13.17□□□□□ -0.3
SIN3B-204ENST00000594372 POMGNT1Q8WZA1 660 aa13.17□□□□□ -0.3
SIN3B-204ENST00000594372 PIGKQ92643 395 aa13.17□□□□□ -0.3
SIN3B-204ENST00000594372 ZSCAN31Q96LW9 406 aaPredicted RBP13.17□□□□□ -0.3
SIN3B-204ENST00000594372 PKMYT1Q99640 499 aa13.17□□□□□ -0.3
SIN3B-204ENST00000594372 FAM213AQ9BRX8 229 aa13.17□□□□□ -0.3
SIN3B-204ENST00000594372 KIF9Q9HAQ2 790 aa13.17□□□□□ -0.3
SIN3B-204ENST00000594372 SH2B1Q9NRF2 756 aaPredicted RBP13.17□□□□□ -0.3
SIN3B-204ENST00000594372 KCND2Q9NZV8 630 aa13.17□□□□□ -0.3
SIN3B-204ENST00000594372 DERAQ9Y315 318 aa13.17□□□□□ -0.3
SIN3B-204ENST00000594372 C2CD2Q9Y426 696 aa13.17□□□□□ -0.3
SIN3B-204ENST00000594372 LAMA5O15230 3695 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms