RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 PPP1R3GB7ZBB8 358 aa16.59■□□□□ 0.25
FOXA3-202ENST00000594297 MEFVO15553 781 aaPredicted RBP16.59■□□□□ 0.25
FOXA3-202ENST00000594297 PRPF6O94906 941 aaKnown RBP16.59■□□□□ 0.25
FOXA3-202ENST00000594297 BMP6P22004 513 aa16.59■□□□□ 0.25
FOXA3-202ENST00000594297 RPL13P26373 211 aaKnown RBP16.59■□□□□ 0.25
FOXA3-202ENST00000594297 LRRC63Q05C16 580 aa16.59■□□□□ 0.25
FOXA3-202ENST00000594297 BMT2Q1RMZ1 405 aa16.59■□□□□ 0.25
FOXA3-202ENST00000594297 PLA2G2CQ5R387 149 aa16.59■□□□□ 0.25
FOXA3-202ENST00000594297 TCEAL6Q6IPX3 200 aa16.59■□□□□ 0.25
FOXA3-202ENST00000594297 PSAPL1Q6NUJ1 521 aa16.59■□□□□ 0.25
FOXA3-202ENST00000594297 UNQ6494/PRO21346Q6UXR6 183 aa16.59■□□□□ 0.25
FOXA3-202ENST00000594297 EPM2AIP1Q7L775 607 aaPredicted RBP16.59■□□□□ 0.25
FOXA3-202ENST00000594297 TMEM130Q8N3G9 435 aa16.59■□□□□ 0.25
FOXA3-202ENST00000594297 SCFD1Q8WVM8 642 aa16.59■□□□□ 0.25
FOXA3-202ENST00000594297 NELFBQ8WX92 580 aa16.59■□□□□ 0.25
FOXA3-202ENST00000594297 TCEAL3Q969E4 200 aa16.59■□□□□ 0.25
FOXA3-202ENST00000594297 CRISPLD1Q9H336 500 aa16.59■□□□□ 0.25
FOXA3-202ENST00000594297 CNTN3Q9P232 1028 aa16.59■□□□□ 0.25
FOXA3-202ENST00000594297 ARHGAP28Q9P2N2 729 aa16.59■□□□□ 0.25
FOXA3-202ENST00000594297 TBX20Q9UMR3 447 aa16.59■□□□□ 0.25
FOXA3-202ENST00000594297 CTNND2Q9UQB3 1225 aa16.59■□□□□ 0.25
FOXA3-202ENST00000594297 PDXKO00764 312 aa16.58■□□□□ 0.24
FOXA3-202ENST00000594297 OR4Q2P0C623 313 aa16.58■□□□□ 0.24
FOXA3-202ENST00000594297 KCNE1P15382 129 aa16.58■□□□□ 0.24
FOXA3-202ENST00000594297 MPLP40238 635 aa16.58■□□□□ 0.24
FOXA3-202ENST00000594297 MYL5Q02045 173 aa16.58■□□□□ 0.24
FOXA3-202ENST00000594297 TNK2Q07912 1038 aa16.58■□□□□ 0.24
FOXA3-202ENST00000594297 ARHGAP29Q52LW3 1261 aa16.58■□□□□ 0.24
FOXA3-202ENST00000594297 ZC2HC1CQ53FD0 456 aaPredicted RBP16.58■□□□□ 0.24
FOXA3-202ENST00000594297 FOXR2Q6PJQ5 311 aa16.58■□□□□ 0.24
FOXA3-202ENST00000594297 CACNA2D4Q7Z3S7 1137 aa16.58■□□□□ 0.24
FOXA3-202ENST00000594297 ARID3BQ8IVW6 561 aaPredicted RBP16.58■□□□□ 0.24
FOXA3-202ENST00000594297 NELFCDQ8IXH7 590 aa16.58■□□□□ 0.24
FOXA3-202ENST00000594297 BEST2Q8NFU1 509 aa16.58■□□□□ 0.24
FOXA3-202ENST00000594297 NOC3LQ8WTT2 800 aaKnown RBP16.58■□□□□ 0.24
FOXA3-202ENST00000594297 KCNN1Q92952 543 aa16.58■□□□□ 0.24
FOXA3-202ENST00000594297 PGLYRP2Q96PD5 576 aa16.58■□□□□ 0.24
FOXA3-202ENST00000594297 ACO2Q99798 780 aaKnown RBP16.58■□□□□ 0.24
FOXA3-202ENST00000594297 LSM14BQ9BX40 385 aaKnown RBP16.58■□□□□ 0.24
FOXA3-202ENST00000594297 PTPRHQ9HD43 1115 aa16.58■□□□□ 0.24
FOXA3-202ENST00000594297 ZMIZ1Q9ULJ6 1067 aa16.58■□□□□ 0.24
FOXA3-202ENST00000594297 MAFFQ9ULX9 164 aa16.58■□□□□ 0.24
FOXA3-202ENST00000594297 IKBKBO14920 756 aa16.57■□□□□ 0.24
FOXA3-202ENST00000594297 PRAMEF12O95522 483 aa16.57■□□□□ 0.24
FOXA3-202ENST00000594297 RPL9P32969 192 aaKnown RBP16.57■□□□□ 0.24
FOXA3-202ENST00000594297 LIG4P49917 911 aa16.57■□□□□ 0.24
FOXA3-202ENST00000594297 RNF43Q68DV7 783 aa16.57■□□□□ 0.24
FOXA3-202ENST00000594297 SLFN12LQ6IEE8 588 aa16.57■□□□□ 0.24
FOXA3-202ENST00000594297 CENPPQ6IPU0 288 aa16.57■□□□□ 0.24
FOXA3-202ENST00000594297 TAS1R3Q7RTX0 852 aa16.57■□□□□ 0.24
FOXA3-202ENST00000594297 SYNPOQ8N3V7 929 aa16.57■□□□□ 0.24
FOXA3-202ENST00000594297 APPL2Q8NEU8 664 aa16.57■□□□□ 0.24
FOXA3-202ENST00000594297 ENOX1Q8TC92 643 aaKnown RBP16.57■□□□□ 0.24
FOXA3-202ENST00000594297 FIZ1Q96SL8 496 aa16.57■□□□□ 0.24
FOXA3-202ENST00000594297 MRPL4Q9BYD3 311 aaKnown RBP16.57■□□□□ 0.24
FOXA3-202ENST00000594297 TUBGCP4Q9UGJ1 667 aa16.57■□□□□ 0.24
FOXA3-202ENST00000594297 PCDHB8Q9UN66 801 aa16.57■□□□□ 0.24
FOXA3-202ENST00000594297 KIAA1549LQ6ZVL6 1849 aa16.56■□□□□ 0.24
FOXA3-202ENST00000594297 ABLIM1O14639 778 aa16.56■□□□□ 0.24
FOXA3-202ENST00000594297 HNRNPDLO14979 420 aaKnown RBP16.56■□□□□ 0.24
FOXA3-202ENST00000594297 PPP1R37O75864 691 aa16.56■□□□□ 0.24
FOXA3-202ENST00000594297 HARSP12081 509 aaKnown RBP16.56■□□□□ 0.24
FOXA3-202ENST00000594297 MATR3P43243 847 aaKnown RBP eCLIP16.56■□□□□ 0.24
FOXA3-202ENST00000594297 CASP5P51878 434 aa16.56■□□□□ 0.24
FOXA3-202ENST00000594297 PLD1Q13393 1074 aa16.56■□□□□ 0.24
FOXA3-202ENST00000594297 EDRF1Q3B7T1 1238 aa16.56■□□□□ 0.24
FOXA3-202ENST00000594297 SPATA1Q5VX52 437 aa16.56■□□□□ 0.24
FOXA3-202ENST00000594297 ZPBP2Q6X784 338 aa16.56■□□□□ 0.24
FOXA3-202ENST00000594297 C11orf57Q6ZUT1 292 aaPredicted RBP16.56■□□□□ 0.24
FOXA3-202ENST00000594297 GAREM2Q75VX8 874 aa16.56■□□□□ 0.24
FOXA3-202ENST00000594297 FAM114A1Q8IWE2 563 aa16.56■□□□□ 0.24
FOXA3-202ENST00000594297 ANKRD20A12PQ8NF67 263 aa16.56■□□□□ 0.24
FOXA3-202ENST00000594297 ACAP3Q96P50 834 aa16.56■□□□□ 0.24
FOXA3-202ENST00000594297 EDEM2Q9BV94 578 aa16.56■□□□□ 0.24
FOXA3-202ENST00000594297 TARS2Q9BW92 718 aaKnown RBP16.56■□□□□ 0.24
FOXA3-202ENST00000594297 STRA6Q9BX79 667 aa16.56■□□□□ 0.24
FOXA3-202ENST00000594297 PCDHGA5Q9Y5G8 931 aa16.56■□□□□ 0.24
FOXA3-202ENST00000594297 TIMM13Q9Y5L4 95 aaPredicted RBP16.56■□□□□ 0.24
FOXA3-202ENST00000594297 WDFY3Q8IZQ1 3526 aa16.56■□□□□ 0.24
FOXA3-202ENST00000594297 ATRXP46100 2492 aa16.56■□□□□ 0.24
FOXA3-202ENST00000594297 CCDC163A0A0D9SF12 145 aa16.55■□□□□ 0.24
FOXA3-202ENST00000594297 DPYSL4O14531 572 aa16.55■□□□□ 0.24
FOXA3-202ENST00000594297 GIPC1O14908 333 aa16.55■□□□□ 0.24
FOXA3-202ENST00000594297 KIAA0391O15091 583 aaKnown RBP16.55■□□□□ 0.24
FOXA3-202ENST00000594297 CETN3O15182 167 aa16.55■□□□□ 0.24
FOXA3-202ENST00000594297 CD44P16070 742 aaKnown RBP16.55■□□□□ 0.24
FOXA3-202ENST00000594297 NOVA1P51513 510 aaKnown RBP16.55■□□□□ 0.24
FOXA3-202ENST00000594297 STX17P56962 302 aa16.55■□□□□ 0.24
FOXA3-202ENST00000594297 FKBP3Q00688 224 aaKnown RBP16.55■□□□□ 0.24
FOXA3-202ENST00000594297 YWHAHQ04917 246 aaPredicted RBP16.55■□□□□ 0.24
FOXA3-202ENST00000594297 ZNF252P-AS1Q0IIN9 211 aa16.55■□□□□ 0.24
FOXA3-202ENST00000594297 DUSP4Q13115 394 aa16.55■□□□□ 0.24
FOXA3-202ENST00000594297 MYBPC2Q14324 1141 aa16.55■□□□□ 0.24
FOXA3-202ENST00000594297 GPR158Q5T848 1215 aa16.55■□□□□ 0.24
FOXA3-202ENST00000594297 CSGALNACT2Q8N6G5 542 aa16.55■□□□□ 0.24
FOXA3-202ENST00000594297 TTC9BQ8N6N2 239 aa16.55■□□□□ 0.24
FOXA3-202ENST00000594297 TCHPQ9BT92 498 aa16.55■□□□□ 0.24
FOXA3-202ENST00000594297 TMEM121BQ9BXQ6 578 aaPredicted RBP16.55■□□□□ 0.24
FOXA3-202ENST00000594297 CBX8Q9HC52 389 aa16.55■□□□□ 0.24
FOXA3-202ENST00000594297 VPS45Q9NRW7 570 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms