RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 ADAM22Q9P0K1 906 aa14□□□□□ -0.17
VRK3-205ENST00000593919 CTTNBP2NLQ9P2B4 639 aa14□□□□□ -0.17
VRK3-205ENST00000593919 CNOT8Q9UFF9 292 aaKnown RBP14□□□□□ -0.17
VRK3-205ENST00000593919 TSPAN16Q9UKR8 245 aa14□□□□□ -0.17
VRK3-205ENST00000593919 KIAA1257Q9ULG3 409 aa14□□□□□ -0.17
VRK3-205ENST00000593919 VWA8A3KMH1 1905 aa13.99□□□□□ -0.17
VRK3-205ENST00000593919 I3L4J1 428 aa13.99□□□□□ -0.17
VRK3-205ENST00000593919 GABRDO14764 452 aa13.99□□□□□ -0.17
VRK3-205ENST00000593919 KIAA0355O15063 1070 aa13.99□□□□□ -0.17
VRK3-205ENST00000593919 MMP8P22894 467 aa13.99□□□□□ -0.17
VRK3-205ENST00000593919 RRM1P23921 792 aa13.99□□□□□ -0.17
VRK3-205ENST00000593919 RFC2P35250 354 aa13.99□□□□□ -0.17
VRK3-205ENST00000593919 TNNT3P45378 269 aaPredicted RBP13.99□□□□□ -0.17
VRK3-205ENST00000593919 PTP4A2Q12974 167 aa13.99□□□□□ -0.17
VRK3-205ENST00000593919 MEI1Q5TIA1 1274 aa13.99□□□□□ -0.17
VRK3-205ENST00000593919 PPP1R2P3Q6NXS1 205 aa13.99□□□□□ -0.17
VRK3-205ENST00000593919 LLGL2Q6P1M3 1020 aa13.99□□□□□ -0.17
VRK3-205ENST00000593919 MMS22LQ6ZRQ5 1243 aa13.99□□□□□ -0.17
VRK3-205ENST00000593919 UBE2Q1Q7Z7E8 422 aa13.99□□□□□ -0.17
VRK3-205ENST00000593919 GSPT2Q8IYD1 628 aaKnown RBP13.99□□□□□ -0.17
VRK3-205ENST00000593919 MMGT1Q8N4V1 131 aa13.99□□□□□ -0.17
VRK3-205ENST00000593919 LRRC57Q8N9N7 239 aa13.99□□□□□ -0.17
VRK3-205ENST00000593919 TRIM11Q96F44 468 aa13.99□□□□□ -0.17
VRK3-205ENST00000593919 VCPIP1Q96JH7 1222 aa13.99□□□□□ -0.17
VRK3-205ENST00000593919 CASD1Q96PB1 797 aa13.99□□□□□ -0.17
VRK3-205ENST00000593919 HINFPQ9BQA5 517 aa13.99□□□□□ -0.17
VRK3-205ENST00000593919 LPIN3Q9BQK8 851 aa13.99□□□□□ -0.17
VRK3-205ENST00000593919 NUP85Q9BW27 656 aa13.99□□□□□ -0.17
VRK3-205ENST00000593919 UBXN6Q9BZV1 441 aa13.99□□□□□ -0.17
VRK3-205ENST00000593919 DNAJB4Q9UDY4 337 aa13.99□□□□□ -0.17
VRK3-205ENST00000593919 CYTH4Q9UIA0 394 aa13.99□□□□□ -0.17
VRK3-205ENST00000593919 TIMM13Q9Y5L4 95 aaPredicted RBP13.99□□□□□ -0.17
VRK3-205ENST00000593919 MYBL1P10243 752 aa13.98□□□□□ -0.17
VRK3-205ENST00000593919 CSF2RAP15509 400 aa13.98□□□□□ -0.17
VRK3-205ENST00000593919 BRCC3P46736 316 aa13.98□□□□□ -0.17
VRK3-205ENST00000593919 MRPS25P82663 173 aaKnown RBP13.98□□□□□ -0.17
VRK3-205ENST00000593919 C1QBPQ07021 282 aaKnown RBP13.98□□□□□ -0.17
VRK3-205ENST00000593919 IKBKEQ14164 716 aa13.98□□□□□ -0.17
VRK3-205ENST00000593919 CASP8Q14790 479 aa13.98□□□□□ -0.17
VRK3-205ENST00000593919 TCEAL1Q15170 157 aa13.98□□□□□ -0.17
VRK3-205ENST00000593919 TERF2Q15554 542 aa13.98□□□□□ -0.17
VRK3-205ENST00000593919 PTPROQ16827 1216 aa13.98□□□□□ -0.17
VRK3-205ENST00000593919 LCLAT1Q6UWP7 414 aa13.98□□□□□ -0.17
VRK3-205ENST00000593919 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.98□□□□□ -0.17
VRK3-205ENST00000593919 NPAS4Q8IUM7 802 aa13.98□□□□□ -0.17
VRK3-205ENST00000593919 CRYBG2Q8N1P7 616 aa13.98□□□□□ -0.17
VRK3-205ENST00000593919 TMEM86AQ8N2M4 240 aa13.98□□□□□ -0.17
VRK3-205ENST00000593919 ZNF564Q8TBZ8 553 aaPredicted RBP13.98□□□□□ -0.17
VRK3-205ENST00000593919 FAM193BQ96PV7 902 aaPredicted RBP13.98□□□□□ -0.17
VRK3-205ENST00000593919 LRRC1Q9BTT6 524 aa13.98□□□□□ -0.17
VRK3-205ENST00000593919 HOXA2O43364 376 aa13.98□□□□□ -0.17
VRK3-205ENST00000593919 BUB1BO60566 1050 aaPredicted RBP13.98□□□□□ -0.17
VRK3-205ENST00000593919 ODC1P11926 461 aa13.98□□□□□ -0.17
VRK3-205ENST00000593919 RAG1P15918 1043 aa13.98□□□□□ -0.17
VRK3-205ENST00000593919 ACAT1P24752 427 aaKnown RBP13.98□□□□□ -0.17
VRK3-205ENST00000593919 GPD2P43304 727 aa13.98□□□□□ -0.17
VRK3-205ENST00000593919 HADHBP55084 474 aaKnown RBP13.98□□□□□ -0.17
VRK3-205ENST00000593919 PSMC1P62191 440 aaKnown RBP13.98□□□□□ -0.17
VRK3-205ENST00000593919 ITIH3Q06033 890 aa13.98□□□□□ -0.17
VRK3-205ENST00000593919 STILQ15468 1287 aa13.98□□□□□ -0.17
VRK3-205ENST00000593919 GOLGA7BQ2TAP0 167 aa13.98□□□□□ -0.17
VRK3-205ENST00000593919 MAP9Q49MG5 647 aa13.98□□□□□ -0.17
VRK3-205ENST00000593919 DCLRE1AQ6PJP8 1040 aa13.98□□□□□ -0.17
VRK3-205ENST00000593919 PHLDB2Q86SQ0 1253 aa13.98□□□□□ -0.17
VRK3-205ENST00000593919 DAAM2Q86T65 1068 aa13.98□□□□□ -0.17
VRK3-205ENST00000593919 B3GALNT2Q8NCR0 500 aa13.98□□□□□ -0.17
VRK3-205ENST00000593919 AVENQ9NQS1 362 aaPredicted RBP13.98□□□□□ -0.17
VRK3-205ENST00000593919 UVRAGQ9P2Y5 699 aa13.98□□□□□ -0.17
VRK3-205ENST00000593919 H3BQF6 201 aa13.97□□□□□ -0.17
VRK3-205ENST00000593919 M0QZQ0 153 aa13.97□□□□□ -0.17
VRK3-205ENST00000593919 MTA2O94776 668 aa13.97□□□□□ -0.17
VRK3-205ENST00000593919 FAM163BP0C2L3 166 aa13.97□□□□□ -0.17
VRK3-205ENST00000593919 CCDC130P13994 396 aa13.97□□□□□ -0.17
VRK3-205ENST00000593919 OR1G1P47890 313 aa13.97□□□□□ -0.17
VRK3-205ENST00000593919 CCDC142Q17RM4 750 aa13.97□□□□□ -0.17
VRK3-205ENST00000593919 CFAP221Q4G0U5 840 aa13.97□□□□□ -0.17
VRK3-205ENST00000593919 PTPN20Q4JDL3 420 aa13.97□□□□□ -0.17
VRK3-205ENST00000593919 TTC30AQ86WT1 665 aa13.97□□□□□ -0.17
VRK3-205ENST00000593919 UBA3Q8TBC4 463 aa13.97□□□□□ -0.17
VRK3-205ENST00000593919 RSPH1Q8WYR4 309 aa13.97□□□□□ -0.17
VRK3-205ENST00000593919 TNIP3Q96KP6 325 aa13.97□□□□□ -0.17
VRK3-205ENST00000593919 CPXM1Q96SM3 734 aa13.97□□□□□ -0.17
VRK3-205ENST00000593919 NRDE2Q9H7Z3 1164 aa13.97□□□□□ -0.17
VRK3-205ENST00000593919 RBM12Q9NTZ6 932 aaKnown RBP13.97□□□□□ -0.17
VRK3-205ENST00000593919 DDX43Q9NXZ2 648 aaKnown RBP13.97□□□□□ -0.17
VRK3-205ENST00000593919 HCSTQ9UBK5 93 aa13.97□□□□□ -0.17
VRK3-205ENST00000593919 PRG3Q9Y2Y8 225 aaPredicted RBP13.97□□□□□ -0.17
VRK3-205ENST00000593919 PTPRSQ13332 1948 aa13.97□□□□□ -0.17
VRK3-205ENST00000593919 TBKBP1A7MCY6 615 aa13.96□□□□□ -0.17
VRK3-205ENST00000593919 ATP2C2O75185 946 aa13.96□□□□□ -0.17
VRK3-205ENST00000593919 UPP2O95045 317 aa13.96□□□□□ -0.17
VRK3-205ENST00000593919 CALB1P05937 261 aa13.96□□□□□ -0.17
VRK3-205ENST00000593919 PFKMP08237 780 aa13.96□□□□□ -0.17
VRK3-205ENST00000593919 MYBL2P10244 700 aa13.96□□□□□ -0.17
VRK3-205ENST00000593919 LHX1P48742 406 aa13.96□□□□□ -0.17
VRK3-205ENST00000593919 SLC7A5Q01650 507 aa13.96□□□□□ -0.17
VRK3-205ENST00000593919 PKDCCQ504Y2 493 aa13.96□□□□□ -0.17
VRK3-205ENST00000593919 LIN9Q5TKA1 542 aa13.96□□□□□ -0.17
VRK3-205ENST00000593919 ARHGAP17Q68EM7 881 aa13.96□□□□□ -0.17
VRK3-205ENST00000593919 MFSD5Q6N075 450 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms