RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 SLC15A4Q8N697 577 aa6□□□□□ -1.45
SMAD4-216ENST00000593223 AMER2Q8N7J2 671 aa6□□□□□ -1.45
SMAD4-216ENST00000593223 DNAJC5GQ8N7S2 189 aa6□□□□□ -1.45
SMAD4-216ENST00000593223 BEND2Q8NDZ0 799 aa6□□□□□ -1.45
SMAD4-216ENST00000593223 TOR1AIP2Q8NFQ8 470 aa6□□□□□ -1.45
SMAD4-216ENST00000593223 FUBP1Q96AE4 644 aaKnown RBP6□□□□□ -1.45
SMAD4-216ENST00000593223 SPATA5L1Q9BVQ7 753 aa6□□□□□ -1.45
SMAD4-216ENST00000593223 TPSD1Q9BZJ3 242 aa6□□□□□ -1.45
SMAD4-216ENST00000593223 KIAA1586Q9HCI6 787 aa6□□□□□ -1.45
SMAD4-216ENST00000593223 SACM1LQ9NTJ5 587 aa6□□□□□ -1.45
SMAD4-216ENST00000593223 GEMIN8Q9NWZ8 242 aaKnown RBP6□□□□□ -1.45
SMAD4-216ENST00000593223 OGDHLQ9ULD0 1010 aa6□□□□□ -1.45
SMAD4-216ENST00000593223 PCDHGB6Q9Y5F9 930 aa6□□□□□ -1.45
SMAD4-216ENST00000593223 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6□□□□□ -1.45
SMAD4-216ENST00000593223 CUL7Q14999 1698 aa6□□□□□ -1.45
SMAD4-216ENST00000593223 CFAP43Q8NDM7 1665 aa6□□□□□ -1.45
SMAD4-216ENST00000593223 SPATA31A3Q5VYP0 1347 aa5.99□□□□□ -1.45
SMAD4-216ENST00000593223 PTPRGP23470 1445 aa5.99□□□□□ -1.45
SMAD4-216ENST00000593223 TOP2AP11388 1531 aaKnown RBP5.99□□□□□ -1.45
SMAD4-216ENST00000593223 ABCA5Q8WWZ7 1642 aa5.99□□□□□ -1.45
SMAD4-216ENST00000593223 COL4A3Q01955 1670 aa5.99□□□□□ -1.45
SMAD4-216ENST00000593223 TBX3O15119 743 aa5.99□□□□□ -1.45
SMAD4-216ENST00000593223 ATXN1LP0C7T5 689 aaKnown RBP5.99□□□□□ -1.45
SMAD4-216ENST00000593223 ZKSCAN1P17029 563 aaPredicted RBP5.99□□□□□ -1.45
SMAD4-216ENST00000593223 EN2P19622 333 aaPredicted RBP5.99□□□□□ -1.45
SMAD4-216ENST00000593223 CD6P30203 668 aa5.99□□□□□ -1.45
SMAD4-216ENST00000593223 INHBCP55103 352 aa5.99□□□□□ -1.45
SMAD4-216ENST00000593223 TGFB2P61812 414 aa5.99□□□□□ -1.45
SMAD4-216ENST00000593223 IRX6P78412 446 aaPredicted RBP5.99□□□□□ -1.45
SMAD4-216ENST00000593223 CTBP1Q13363 440 aa5.99□□□□□ -1.45
SMAD4-216ENST00000593223 MPP3Q13368 585 aa5.99□□□□□ -1.45
SMAD4-216ENST00000593223 RAB32Q13637 225 aa5.99□□□□□ -1.45
SMAD4-216ENST00000593223 POLD3Q15054 466 aaPredicted RBP5.99□□□□□ -1.45
SMAD4-216ENST00000593223 TMEM108Q6UXF1 575 aa5.99□□□□□ -1.45
SMAD4-216ENST00000593223 TMPRSS9Q7Z410 1059 aa5.99□□□□□ -1.45
SMAD4-216ENST00000593223 ANKS1AQ92625 1134 aa5.99□□□□□ -1.45
SMAD4-216ENST00000593223 FBXL20Q96IG2 436 aa5.99□□□□□ -1.45
SMAD4-216ENST00000593223 COQ10AQ96MF6 247 aa5.99□□□□□ -1.45
SMAD4-216ENST00000593223 ZNF287Q9HBT7 754 aa5.99□□□□□ -1.45
SMAD4-216ENST00000593223 KCTD5Q9NXV2 234 aa5.99□□□□□ -1.45
SMAD4-216ENST00000593223 CPNE7Q9UBL6 633 aa5.99□□□□□ -1.45
SMAD4-216ENST00000593223 FAM50BQ9Y247 325 aa5.99□□□□□ -1.45
SMAD4-216ENST00000593223 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.99□□□□□ -1.45
SMAD4-216ENST00000593223 MAGI3Q5TCQ9 1506 aa5.99□□□□□ -1.45
SMAD4-216ENST00000593223 FHAD1B1AJZ9 1412 aa5.99□□□□□ -1.45
SMAD4-216ENST00000593223 CD109Q6YHK3 1445 aa5.99□□□□□ -1.45
SMAD4-216ENST00000593223 GRID2IPA4D2P6 1211 aa5.98□□□□□ -1.45
SMAD4-216ENST00000593223 MYO1FO00160 1098 aa5.98□□□□□ -1.45
SMAD4-216ENST00000593223 FOXN1O15353 648 aa5.98□□□□□ -1.45
SMAD4-216ENST00000593223 YY2O15391 372 aa5.98□□□□□ -1.45
SMAD4-216ENST00000593223 FRS3O43559 492 aa5.98□□□□□ -1.45
SMAD4-216ENST00000593223 TOM1O60784 492 aa5.98□□□□□ -1.45
SMAD4-216ENST00000593223 GCP02774 474 aa5.98□□□□□ -1.45
SMAD4-216ENST00000593223 SRGNP10124 158 aa5.98□□□□□ -1.45
SMAD4-216ENST00000593223 XRCC6P12956 609 aaKnown RBP eCLIP5.98□□□□□ -1.45
SMAD4-216ENST00000593223 PPP3CBP16298 524 aa5.98□□□□□ -1.45
SMAD4-216ENST00000593223 PXNP49023 591 aaPredicted RBP5.98□□□□□ -1.45
SMAD4-216ENST00000593223 TOB1P50616 345 aaPredicted RBP5.98□□□□□ -1.45
SMAD4-216ENST00000593223 ARFIP2P53365 341 aa5.98□□□□□ -1.45
SMAD4-216ENST00000593223 LILRA4P59901 499 aa5.98□□□□□ -1.45
SMAD4-216ENST00000593223 DPTQ07507 201 aa5.98□□□□□ -1.45
SMAD4-216ENST00000593223 GALEQ14376 348 aa5.98□□□□□ -1.45
SMAD4-216ENST00000593223 CNGA2Q16280 664 aa5.98□□□□□ -1.45
SMAD4-216ENST00000593223 RBM20Q5T481 1227 aaKnown RBP5.98□□□□□ -1.45
SMAD4-216ENST00000593223 Q6ZNX1 250 aa5.98□□□□□ -1.45
SMAD4-216ENST00000593223 TSHZ1Q6ZSZ6 1077 aa5.98□□□□□ -1.45
SMAD4-216ENST00000593223 LNX2Q8N448 690 aa5.98□□□□□ -1.45
SMAD4-216ENST00000593223 LPIN2Q92539 896 aa5.98□□□□□ -1.45
SMAD4-216ENST00000593223 MS4A7Q9GZW8 240 aaPredicted RBP5.98□□□□□ -1.45
SMAD4-216ENST00000593223 ZSCAN32Q9NX65 697 aa5.98□□□□□ -1.45
SMAD4-216ENST00000593223 LRIT1Q9P2V4 623 aa5.98□□□□□ -1.45
SMAD4-216ENST00000593223 SHOC2Q9UQ13 582 aa5.98□□□□□ -1.45
SMAD4-216ENST00000593223 ISM1B1AKI9 464 aa5.97□□□□□ -1.45
SMAD4-216ENST00000593223 PQBP1O60828 265 aaKnown RBP5.97□□□□□ -1.45
SMAD4-216ENST00000593223 RHOBTB3O94955 611 aa5.97□□□□□ -1.45
SMAD4-216ENST00000593223 ESRRBO95718 433 aa5.97□□□□□ -1.45
SMAD4-216ENST00000593223 SLPIP03973 132 aa5.97□□□□□ -1.45
SMAD4-216ENST00000593223 CYP2C9P11712 490 aa5.97□□□□□ -1.45
SMAD4-216ENST00000593223 MYF5P13349 255 aa5.97□□□□□ -1.45
SMAD4-216ENST00000593223 KRT4P19013 534 aa5.97□□□□□ -1.45
SMAD4-216ENST00000593223 TGM1P22735 817 aa5.97□□□□□ -1.45
SMAD4-216ENST00000593223 VIPR2P41587 438 aa5.97□□□□□ -1.45
SMAD4-216ENST00000593223 ZNF134P52741 427 aa5.97□□□□□ -1.45
SMAD4-216ENST00000593223 SEC24CP53992 1094 aa5.97□□□□□ -1.45
SMAD4-216ENST00000593223 LOXL3P58215 753 aa5.97□□□□□ -1.45
SMAD4-216ENST00000593223 KRT17Q04695 432 aa5.97□□□□□ -1.45
SMAD4-216ENST00000593223 COBLL1Q53SF7 1204 aa5.97□□□□□ -1.45
SMAD4-216ENST00000593223 KSR2Q6VAB6 950 aa5.97□□□□□ -1.45
SMAD4-216ENST00000593223 Q6ZPA2 131 aa5.97□□□□□ -1.45
SMAD4-216ENST00000593223 LDLRAD3Q86YD5 345 aa5.97□□□□□ -1.45
SMAD4-216ENST00000593223 LINC00476Q8WZB0 136 aa5.97□□□□□ -1.45
SMAD4-216ENST00000593223 APIPQ96GX9 242 aa5.97□□□□□ -1.45
SMAD4-216ENST00000593223 SORCS2Q96PQ0 1159 aa5.97□□□□□ -1.45
SMAD4-216ENST00000593223 OSBPL9Q96SU4 736 aa5.97□□□□□ -1.45
SMAD4-216ENST00000593223 MRIQ9BWK5 157 aa5.97□□□□□ -1.45
SMAD4-216ENST00000593223 APOL5Q9BWW9 433 aa5.97□□□□□ -1.45
SMAD4-216ENST00000593223 ACTRT3Q9BYD9 372 aa5.97□□□□□ -1.45
SMAD4-216ENST00000593223 SYBUQ9NX95 663 aa5.97□□□□□ -1.45
SMAD4-216ENST00000593223 PACSIN3Q9UKS6 424 aa5.97□□□□□ -1.45
SMAD4-216ENST00000593223 PAXBP1Q9Y5B6 917 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms